RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 EMP1P54849 157 aa9.99□□□□□ -0.81
CDCA3-202ENST00000422785 TRAV26-1A0A087WT03 109 aa9.98□□□□□ -0.81
CDCA3-202ENST00000422785 IGHV3-53P01767 116 aa9.98□□□□□ -0.81
CDCA3-202ENST00000422785 SMIM13P0DJ93 91 aa9.98□□□□□ -0.81
CDCA3-202ENST00000422785 HERVK_113P61574 105 aa9.98□□□□□ -0.81
CDCA3-202ENST00000422785 FAM110AQ9BQ89 295 aa9.98□□□□□ -0.81
CDCA3-202ENST00000422785 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
CDCA3-202ENST00000422785 IL17DQ8TAD2 202 aa9.98□□□□□ -0.81
CDCA3-202ENST00000422785 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
CDCA3-202ENST00000422785 NFE4Q86UQ8 179 aa9.97□□□□□ -0.81
CDCA3-202ENST00000422785 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
CDCA3-202ENST00000422785 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
CDCA3-202ENST00000422785 CRYBA4P53673 196 aa9.97□□□□□ -0.81
CDCA3-202ENST00000422785 Q9UF83 564 aa9.97□□□□□ -0.81
CDCA3-202ENST00000422785 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
CDCA3-202ENST00000422785 GCN1Q92616 2671 aaKnown RBP9.97□□□□□ -0.81
CDCA3-202ENST00000422785 RAB37Q96AX2 223 aa9.97□□□□□ -0.81
CDCA3-202ENST00000422785 HIVEP2P31629 2446 aa9.96□□□□□ -0.81
CDCA3-202ENST00000422785 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.81
CDCA3-202ENST00000422785 ZNF815PA8K554 130 aa9.96□□□□□ -0.81
CDCA3-202ENST00000422785 H3BUT2 72 aa9.96□□□□□ -0.81
CDCA3-202ENST00000422785 HIST1H4GQ99525 98 aa9.96□□□□□ -0.81
CDCA3-202ENST00000422785 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.82
CDCA3-202ENST00000422785 LY6G6DO95868 133 aa9.96□□□□□ -0.82
CDCA3-202ENST00000422785 TMEM170BQ5T4T1 132 aa9.96□□□□□ -0.82
CDCA3-202ENST00000422785 GAGE10A6NGK3 116 aa9.95□□□□□ -0.82
CDCA3-202ENST00000422785 VCX2Q9H322 139 aa9.95□□□□□ -0.82
CDCA3-202ENST00000422785 C19orf73Q9NVV2 129 aa9.95□□□□□ -0.82
CDCA3-202ENST00000422785 TMEM263Q8WUH6 116 aaKnown RBP9.95□□□□□ -0.82
CDCA3-202ENST00000422785 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-202ENST00000422785 NHP2Q9NX24 153 aaKnown RBP9.94□□□□□ -0.82
CDCA3-202ENST00000422785 TRGV1A0A0A0MS02 117 aa9.94□□□□□ -0.82
CDCA3-202ENST00000422785 PHLDA1Q8WV24 401 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-202ENST00000422785 SETXQ7Z333 2677 aaKnown RBP9.93□□□□□ -0.82
CDCA3-202ENST00000422785 NDUFA11Q86Y39 141 aa9.93□□□□□ -0.82
CDCA3-202ENST00000422785 AMELXQ99217 191 aa9.93□□□□□ -0.82
CDCA3-202ENST00000422785 CHCHD7Q9BUK0 85 aa9.93□□□□□ -0.82
CDCA3-202ENST00000422785 A6NJY4 79 aa9.93□□□□□ -0.82
CDCA3-202ENST00000422785 FAM104AQ969W3 186 aa9.93□□□□□ -0.82
CDCA3-202ENST00000422785 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 SCGB1D4Q6XE38 83 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 GTF2H5Q6ZYL4 71 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 HECTD1Q9ULT8 2610 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 A0A1B0GV72 72 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 K7ERJ3 54 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 KRTAP10-3P60369 221 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 PLEKHB2Q96CS7 222 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 NIPBLQ6KC79 2804 aaeCLIP9.92□□□□□ -0.82
CDCA3-202ENST00000422785 SAMD5Q5TGI4 173 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 SPANXA1Q9NS26 97 aa9.92□□□□□ -0.82
CDCA3-202ENST00000422785 TMEM223A0PJW6 202 aa9.91□□□□□ -0.82
CDCA3-202ENST00000422785 C1QTNF4Q9BXJ3 329 aa9.91□□□□□ -0.82
CDCA3-202ENST00000422785 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
CDCA3-202ENST00000422785 K7EP34 96 aa9.91□□□□□ -0.82
CDCA3-202ENST00000422785 ZNF22P17026 224 aaPredicted RBP9.91□□□□□ -0.82
CDCA3-202ENST00000422785 TSPEAR-AS2P59090 65 aa9.91□□□□□ -0.82
CDCA3-202ENST00000422785 DAZ2Q13117 558 aaKnown RBP9.91□□□□□ -0.82
CDCA3-202ENST00000422785 Q6ZTI0 123 aa9.91□□□□□ -0.82
CDCA3-202ENST00000422785 UBE2D4Q9Y2X8 147 aa9.91□□□□□ -0.82
CDCA3-202ENST00000422785 J3QQQ9 107 aa9.9□□□□□ -0.82
CDCA3-202ENST00000422785 RPL35AP18077 110 aaKnown RBP9.9□□□□□ -0.82
CDCA3-202ENST00000422785 RPL24P83731 157 aaKnown RBP9.9□□□□□ -0.82
CDCA3-202ENST00000422785 C12orf74Q32Q52 190 aa9.9□□□□□ -0.82
CDCA3-202ENST00000422785 ZNF479Q96JC4 524 aa9.9□□□□□ -0.82
CDCA3-202ENST00000422785 JMJD1CQ15652 2540 aa9.9□□□□□ -0.83
CDCA3-202ENST00000422785 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.83
CDCA3-202ENST00000422785 IGHV3-38A0A0C4DH36 116 aa9.9□□□□□ -0.83
CDCA3-202ENST00000422785 FABP2P12104 132 aa9.9□□□□□ -0.83
CDCA3-202ENST00000422785 CEMP1Q6PRD7 247 aaPredicted RBP9.9□□□□□ -0.83
CDCA3-202ENST00000422785 A0A0J9YY99 117 aa9.89□□□□□ -0.83
CDCA3-202ENST00000422785 A0A1B0GWB2 263 aa9.89□□□□□ -0.83
CDCA3-202ENST00000422785 LEPROTO15243 131 aa9.89□□□□□ -0.83
CDCA3-202ENST00000422785 CKS1BP61024 79 aa9.89□□□□□ -0.83
CDCA3-202ENST00000422785 MRPS36P82909 103 aaKnown RBP9.89□□□□□ -0.83
CDCA3-202ENST00000422785 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
CDCA3-202ENST00000422785 C16orf74Q96GX8 76 aa9.89□□□□□ -0.83
CDCA3-202ENST00000422785 LGALS3P17931 250 aaKnown RBP9.89□□□□□ -0.83
CDCA3-202ENST00000422785 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
CDCA3-202ENST00000422785 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
CDCA3-202ENST00000422785 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
CDCA3-202ENST00000422785 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
CDCA3-202ENST00000422785 PF4P02776 101 aa9.88□□□□□ -0.83
CDCA3-202ENST00000422785 NOP10Q9NPE3 64 aaKnown RBP9.88□□□□□ -0.83
CDCA3-202ENST00000422785 PLAC8L1A1L4L8 177 aa9.88□□□□□ -0.83
CDCA3-202ENST00000422785 SRSF9Q13242 221 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDCA3-202ENST00000422785 LINC00482Q8N8I6 264 aa9.88□□□□□ -0.83
CDCA3-202ENST00000422785 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
CDCA3-202ENST00000422785 SPCS1Q9Y6A9 102 aa9.88□□□□□ -0.83
CDCA3-202ENST00000422785 K7EQD1 137 aa9.87□□□□□ -0.83
CDCA3-202ENST00000422785 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
CDCA3-202ENST00000422785 IGLL5B9A064 214 aa9.87□□□□□ -0.83
CDCA3-202ENST00000422785 SPANXB1Q9NS25 103 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-202ENST00000422785 TEX48A0A1B0GUV7 120 aa9.86□□□□□ -0.83
CDCA3-202ENST00000422785 RPL36AP83881 106 aaKnown RBP9.86□□□□□ -0.83
CDCA3-202ENST00000422785 SLC25A29Q8N8R3 303 aa9.86□□□□□ -0.83
CDCA3-202ENST00000422785 RPL36ALQ969Q0 106 aaKnown RBP9.86□□□□□ -0.83
CDCA3-202ENST00000422785 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
CDCA3-202ENST00000422785 NOTCH2Q04721 2471 aa9.86□□□□□ -0.83
CDCA3-202ENST00000422785 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms