RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, human

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-208	ENST00000422080	COTL1	Q14019	142 aa		11.53	□□□□□ -0.56
HDLBP-208	ENST00000422080	FAM231D	Q6ZW35	169 aa		11.53	□□□□□ -0.56
HDLBP-208	ENST00000422080	GATD1	Q8NB37	220 aa		11.53	□□□□□ -0.56
HDLBP-208	ENST00000422080	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.52	□□□□□ -0.56
HDLBP-208	ENST00000422080	hCG_2014768	A0A024R1R8	64 aa		11.52	□□□□□ -0.57
HDLBP-208	ENST00000422080	GATC	O43716	136 aa	Known RBP	11.52	□□□□□ -0.57
HDLBP-208	ENST00000422080	NDUFS6	O75380	124 aa	Known RBP	11.52	□□□□□ -0.57
HDLBP-208	ENST00000422080	SMIM15	Q7Z3B0	74 aa		11.52	□□□□□ -0.57
HDLBP-208	ENST00000422080	CLRN3	Q8NCR9	226 aa		11.52	□□□□□ -0.57
HDLBP-208	ENST00000422080	CIRBP-AS1	Q8TBR5	109 aa		11.52	□□□□□ -0.57
HDLBP-208	ENST00000422080	IGLV4-60	A0A075B6I1	120 aa		11.51	□□□□□ -0.57
HDLBP-208	ENST00000422080		A8MWL6	223 aa		11.51	□□□□□ -0.57
HDLBP-208	ENST00000422080	UBE2L6	O14933	153 aa		11.51	□□□□□ -0.57
HDLBP-208	ENST00000422080	FLG2	Q5D862	2391 aa	Predicted RBP	11.51	□□□□□ -0.57
HDLBP-208	ENST00000422080	AMT	P48728	403 aa		11.5	□□□□□ -0.57
HDLBP-208	ENST00000422080	FOXA3	P55318	350 aa	Predicted RBP	11.5	□□□□□ -0.57
HDLBP-208	ENST00000422080	TEX261	Q6UWH6	196 aa		11.5	□□□□□ -0.57
HDLBP-208	ENST00000422080	IGLV10-54	A0A075B6I4	117 aa		11.49	□□□□□ -0.57
HDLBP-208	ENST00000422080	TRAV26-2	A0A0B4J265	109 aa		11.49	□□□□□ -0.57
HDLBP-208	ENST00000422080	CT83	Q5H943	113 aa		11.49	□□□□□ -0.57
HDLBP-208	ENST00000422080	C9orf163	Q8N9P6	203 aa		11.49	□□□□□ -0.57
HDLBP-208	ENST00000422080	DEFB104A	Q8WTQ1	72 aa		11.49	□□□□□ -0.57
HDLBP-208	ENST00000422080	GFRA4	Q9GZZ7	299 aa		11.48	□□□□□ -0.57
HDLBP-208	ENST00000422080	NCR2	O95944	276 aa		11.47	□□□□□ -0.57
HDLBP-208	ENST00000422080	CEBPG	P53567	150 aa		11.47	□□□□□ -0.57
HDLBP-208	ENST00000422080	EIF5A2	Q9GZV4	153 aa	Known RBP	11.47	□□□□□ -0.57
HDLBP-208	ENST00000422080	RPL39L	Q96EH5	51 aa	Known RBP	11.46	□□□□□ -0.57
HDLBP-208	ENST00000422080	SMIM7	Q9BQ49	75 aa		11.46	□□□□□ -0.57
HDLBP-208	ENST00000422080		H7C423	109 aa		11.45	□□□□□ -0.58
HDLBP-208	ENST00000422080	CNBP	P62633	177 aa	Known RBP	11.45	□□□□□ -0.58
HDLBP-208	ENST00000422080	LINC01551	Q86U37	167 aa		11.45	□□□□□ -0.58
HDLBP-208	ENST00000422080	FAM210A	Q96ND0	272 aa		11.45	□□□□□ -0.58
HDLBP-208	ENST00000422080	hDV102S1	A0JD36	115 aa		11.44	□□□□□ -0.58
HDLBP-208	ENST00000422080	FAM231B	A6NCW3	169 aa		11.44	□□□□□ -0.58
HDLBP-208	ENST00000422080	SDHAF1	A6NFY7	115 aa		11.44	□□□□□ -0.58
HDLBP-208	ENST00000422080		J3QL48	77 aa		11.44	□□□□□ -0.58
HDLBP-208	ENST00000422080	KRTAP10-4	P60372	401 aa	Predicted RBP	11.44	□□□□□ -0.58
HDLBP-208	ENST00000422080	SDIM1	Q6ZPB5	146 aa		11.44	□□□□□ -0.58
HDLBP-208	ENST00000422080	TSKU	Q8WUA8	353 aa		11.44	□□□□□ -0.58
HDLBP-208	ENST00000422080	BORCS7	Q96B45	105 aa		11.44	□□□□□ -0.58
HDLBP-208	ENST00000422080	TRBV6-5	A0A0K0K1A5	114 aa		11.43	□□□□□ -0.58
HDLBP-208	ENST00000422080	ZNF727	A8MUV8	499 aa		11.43	□□□□□ -0.58
HDLBP-208	ENST00000422080	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.43	□□□□□ -0.58
HDLBP-208	ENST00000422080	SRP19	P09132	144 aa	Known RBP	11.43	□□□□□ -0.58
HDLBP-208	ENST00000422080	OSTC	Q9NRP0	149 aa		11.43	□□□□□ -0.58
HDLBP-208	ENST00000422080	AP5S1	Q9NUS5	200 aa		11.43	□□□□□ -0.58
HDLBP-208	ENST00000422080		A0A1B0GUT8	65 aa		11.42	□□□□□ -0.58
HDLBP-208	ENST00000422080		I3L3M4	83 aa		11.42	□□□□□ -0.58
HDLBP-208	ENST00000422080	APCS	P02743	223 aa		11.42	□□□□□ -0.58
HDLBP-208	ENST00000422080	AMMECR1L	Q6DCA0	310 aa		11.42	□□□□□ -0.58
HDLBP-208	ENST00000422080	TMEM191A	Q9H0A3	160 aa		11.42	□□□□□ -0.58
HDLBP-208	ENST00000422080	HIGD1C	A8MV81	97 aa		11.41	□□□□□ -0.58
HDLBP-208	ENST00000422080	PMCH	P20382	165 aa		11.41	□□□□□ -0.58
HDLBP-208	ENST00000422080	CFAP161	Q6P656	301 aa		11.41	□□□□□ -0.58
HDLBP-208	ENST00000422080	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-208	ENST00000422080	GAGE12H	A6NDE8	117 aa		11.4	□□□□□ -0.58
HDLBP-208	ENST00000422080	FGF6	P10767	208 aa		11.4	□□□□□ -0.58
HDLBP-208	ENST00000422080	RNASEK	Q6P5S7	137 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-208	ENST00000422080	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-208	ENST00000422080	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-208	ENST00000422080	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-208	ENST00000422080	SLPI	P03973	132 aa		11.39	□□□□□ -0.59
HDLBP-208	ENST00000422080	ZNF25	P17030	456 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-208	ENST00000422080	ST20	Q9HBF5	79 aa		11.39	□□□□□ -0.59
HDLBP-208	ENST00000422080	IGHV3-64	A0A075B6Q5	118 aa		11.38	□□□□□ -0.59
HDLBP-208	ENST00000422080	IGKV3OR2-268	A0A0C4DH90	116 aa		11.38	□□□□□ -0.59
HDLBP-208	ENST00000422080	ESD	P10768	282 aa		11.38	□□□□□ -0.59
HDLBP-208	ENST00000422080	FAM74A3	Q4VXF1	159 aa		11.38	□□□□□ -0.59
HDLBP-208	ENST00000422080	MRAP2	Q96G30	205 aa		11.38	□□□□□ -0.59
HDLBP-208	ENST00000422080	RNF185	Q96GF1	192 aa		11.38	□□□□□ -0.59
HDLBP-208	ENST00000422080	PANO1	I0J062	215 aa		11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080	GAS8-AS1	O95177	125 aa		11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080	RAB4A	P20338	218 aa		11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080	POLR2K	P53803	58 aa	Known RBP	11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080	RPL37A	P61513	92 aa	Known RBP	11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080	RIG	Q13278	110 aa		11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080	CIRBP	Q14011	172 aa	Known RBP	11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080	TMEM241	Q24JQ0	296 aa		11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080		V9GYV3	84 aa		11.37	□□□□□ -0.59
HDLBP-208	ENST00000422080		A0A1B0GVG6	124 aa		11.36	□□□□□ -0.59
HDLBP-208	ENST00000422080	TSHB	P01222	138 aa		11.36	□□□□□ -0.59
HDLBP-208	ENST00000422080	C15orf56	Q8N910	161 aa		11.36	□□□□□ -0.59
HDLBP-208	ENST00000422080	NUP35	Q8NFH5	326 aa		11.36	□□□□□ -0.59
HDLBP-208	ENST00000422080	ISOC2	Q96AB3	205 aa		11.36	□□□□□ -0.59
HDLBP-208	ENST00000422080	BTF3L4	Q96K17	158 aa		11.36	□□□□□ -0.59
HDLBP-208	ENST00000422080	TRBV27	A0A0K0K1C4	114 aa		11.35	□□□□□ -0.59
HDLBP-208	ENST00000422080	OR5A1	Q8NGJ0	315 aa		11.35	□□□□□ -0.59
HDLBP-208	ENST00000422080	TMEM101	Q96IK0	257 aa		11.35	□□□□□ -0.59
HDLBP-208	ENST00000422080	OXT	P01178	125 aa		11.34	□□□□□ -0.59
HDLBP-208	ENST00000422080	RPS10	P46783	165 aa	Known RBP	11.34	□□□□□ -0.59
HDLBP-208	ENST00000422080	AMN1	Q8IY45	258 aa		11.34	□□□□□ -0.59
HDLBP-208	ENST00000422080	TMEM242	Q9NWH2	141 aa		11.34	□□□□□ -0.59
HDLBP-208	ENST00000422080	PPP1R17	O96001	155 aa		11.33	□□□□□ -0.6
HDLBP-208	ENST00000422080	RPL23	P62829	140 aa	Known RBP	11.33	□□□□□ -0.6
HDLBP-208	ENST00000422080	MRPL52	Q86TS9	123 aa	Known RBP	11.33	□□□□□ -0.6
HDLBP-208	ENST00000422080	DPH3	Q96FX2	82 aa		11.33	□□□□□ -0.6
HDLBP-208	ENST00000422080	NAT8B	Q9UHF3	227 aa		11.33	□□□□□ -0.6
HDLBP-208	ENST00000422080	LRP1	Q07954	4544 aa	Known RBP	11.33	□□□□□ -0.6
HDLBP-208	ENST00000422080		C9JQL5	133 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms