RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 STAB2Q8WWQ8 2551 aa14.96□□□□□ -0.01
ABCF3-202ENST00000421340 CEMP1Q6PRD7 247 aaPredicted RBP14.96□□□□□ -0.01
ABCF3-202ENST00000421340 IGHV3-38A0A0C4DH36 116 aa14.95□□□□□ -0.02
ABCF3-202ENST00000421340 NUPR1O60356 82 aa14.95□□□□□ -0.02
ABCF3-202ENST00000421340 HSBP1O75506 76 aa14.95□□□□□ -0.02
ABCF3-202ENST00000421340 TIRAPP58753 221 aa14.95□□□□□ -0.02
ABCF3-202ENST00000421340 NUPR2A6NF83 97 aa14.94□□□□□ -0.02
ABCF3-202ENST00000421340 C5orf52A6NGY3 159 aa14.94□□□□□ -0.02
ABCF3-202ENST00000421340 LINC01549A6NIU2 74 aa14.93□□□□□ -0.02
ABCF3-202ENST00000421340 NUDT3O95989 172 aa14.92□□□□□ -0.02
ABCF3-202ENST00000421340 SNRPEP62304 92 aaKnown RBP14.92□□□□□ -0.02
ABCF3-202ENST00000421340 NTM-AS1Q6ZSK4 140 aa14.92□□□□□ -0.02
ABCF3-202ENST00000421340 TRBV6-8A0A0A6YYG3 113 aa14.91□□□□□ -0.02
ABCF3-202ENST00000421340 IGLL5B9A064 214 aa14.91□□□□□ -0.02
ABCF3-202ENST00000421340 TCTAP57738 103 aa14.91□□□□□ -0.02
ABCF3-202ENST00000421340 PACRGQ96M98 296 aaPredicted RBP14.91□□□□□ -0.02
ABCF3-202ENST00000421340 KLK5Q9Y337 293 aaPredicted RBP14.91□□□□□ -0.02
ABCF3-202ENST00000421340 IGHV1-24A0A0C4DH33 117 aa14.9□□□□□ -0.02
ABCF3-202ENST00000421340 AMTP48728 403 aa14.9□□□□□ -0.02
ABCF3-202ENST00000421340 LYPD5Q6UWN5 251 aa14.9□□□□□ -0.02
ABCF3-202ENST00000421340 CHCHD7Q9BUK0 85 aa14.9□□□□□ -0.02
ABCF3-202ENST00000421340 TRBV25-1A0A075B6N4 114 aa14.89□□□□□ -0.03
ABCF3-202ENST00000421340 H7C423 109 aa14.89□□□□□ -0.03
ABCF3-202ENST00000421340 HIST3H2BBQ8N257 126 aa14.89□□□□□ -0.03
ABCF3-202ENST00000421340 C20orf203Q8NBC4 194 aa14.89□□□□□ -0.03
ABCF3-202ENST00000421340 TMEM18Q96B42 140 aa14.89□□□□□ -0.03
ABCF3-202ENST00000421340 WWC2-AS2Q96NR7 200 aa14.89□□□□□ -0.03
ABCF3-202ENST00000421340 A0A096LNJ9 63 aa14.88□□□□□ -0.03
ABCF3-202ENST00000421340 HBDP02042 147 aa14.88□□□□□ -0.03
ABCF3-202ENST00000421340 LELP1Q5T871 98 aa14.87□□□□□ -0.03
ABCF3-202ENST00000421340 FAM19A2Q8N3H0 131 aa14.87□□□□□ -0.03
ABCF3-202ENST00000421340 DEFB104AQ8WTQ1 72 aa14.87□□□□□ -0.03
ABCF3-202ENST00000421340 TOMM6Q96B49 74 aa14.87□□□□□ -0.03
ABCF3-202ENST00000421340 TMEM243Q9BU79 118 aa14.87□□□□□ -0.03
ABCF3-202ENST00000421340 CYSLTR1Q9Y271 337 aa14.87□□□□□ -0.03
ABCF3-202ENST00000421340 BTF3P20290 206 aaKnown RBP14.86□□□□□ -0.03
ABCF3-202ENST00000421340 PDZD11Q5EBL8 140 aa14.86□□□□□ -0.03
ABCF3-202ENST00000421340 C2orf66Q6UXQ4 117 aa14.86□□□□□ -0.03
ABCF3-202ENST00000421340 S100A2P29034 98 aa14.85□□□□□ -0.03
ABCF3-202ENST00000421340 SMAGPQ0VAQ4 97 aa14.85□□□□□ -0.03
ABCF3-202ENST00000421340 PMCHL1Q16048 86 aa14.85□□□□□ -0.03
ABCF3-202ENST00000421340 MUC7Q8TAX7 377 aa14.85□□□□□ -0.03
ABCF3-202ENST00000421340 APLNQ9ULZ1 77 aa14.85□□□□□ -0.03
ABCF3-202ENST00000421340 ESRGQ1W209 222 aa14.84□□□□□ -0.03
ABCF3-202ENST00000421340 TIMM21Q9BVV7 248 aa14.83□□□□□ -0.04
ABCF3-202ENST00000421340 PYGO1Q9Y3Y4 419 aa14.83□□□□□ -0.04
ABCF3-202ENST00000421340 NPSP0C0P6 89 aa14.82□□□□□ -0.04
ABCF3-202ENST00000421340 PKIAP61925 76 aa14.82□□□□□ -0.04
ABCF3-202ENST00000421340 MRPL52Q86TS9 123 aaKnown RBP14.82□□□□□ -0.04
ABCF3-202ENST00000421340 TRAV8-6A0A0B4J262 113 aa14.81□□□□□ -0.04
ABCF3-202ENST00000421340 UBE2L6O14933 153 aa14.81□□□□□ -0.04
ABCF3-202ENST00000421340 LEPROTL1O95214 131 aa14.81□□□□□ -0.04
ABCF3-202ENST00000421340 ERASQ7Z444 233 aa14.81□□□□□ -0.04
ABCF3-202ENST00000421340 HIST1H2BLQ99880 126 aa14.81□□□□□ -0.04
ABCF3-202ENST00000421340 CHCHD5Q9BSY4 110 aa14.81□□□□□ -0.04
ABCF3-202ENST00000421340 SPANXA1Q9NS26 97 aa14.81□□□□□ -0.04
ABCF3-202ENST00000421340 HSPB8Q9UJY1 196 aa14.81□□□□□ -0.04
ABCF3-202ENST00000421340 CSDC2Q9Y534 153 aaKnown RBP14.81□□□□□ -0.04
ABCF3-202ENST00000421340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.8□□□□□ -0.04
ABCF3-202ENST00000421340 IGKV2-29A2NJV5 120 aaPredicted RBP14.8□□□□□ -0.04
ABCF3-202ENST00000421340 IGIPA6NJ69 53 aa14.8□□□□□ -0.04
ABCF3-202ENST00000421340 ATP5LO75964 103 aa14.8□□□□□ -0.04
ABCF3-202ENST00000421340 CCL18P55774 89 aa14.8□□□□□ -0.04
ABCF3-202ENST00000421340 RPL39P62891 51 aaKnown RBP14.8□□□□□ -0.04
ABCF3-202ENST00000421340 TMEM141Q96I45 108 aa14.8□□□□□ -0.04
ABCF3-202ENST00000421340 TIMM17AQ99595 171 aa14.8□□□□□ -0.04
ABCF3-202ENST00000421340 IFITM10A6NMD0 228 aa14.79□□□□□ -0.04
ABCF3-202ENST00000421340 ZNF25P17030 456 aaPredicted RBP14.79□□□□□ -0.04
ABCF3-202ENST00000421340 SCGB3A1Q96QR1 104 aa14.79□□□□□ -0.04
ABCF3-202ENST00000421340 UBE2D4Q9Y2X8 147 aa14.79□□□□□ -0.04
ABCF3-202ENST00000421340 A0A1B0GUV1 79 aa14.78□□□□□ -0.04
ABCF3-202ENST00000421340 FGF6P10767 208 aa14.78□□□□□ -0.04
ABCF3-202ENST00000421340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.77□□□□□ -0.05
ABCF3-202ENST00000421340 MRPS16Q9Y3D3 137 aaKnown RBP14.77□□□□□ -0.05
ABCF3-202ENST00000421340 FABP4P15090 132 aa14.76□□□□□ -0.05
ABCF3-202ENST00000421340 MRPS36P82909 103 aaKnown RBP14.76□□□□□ -0.05
ABCF3-202ENST00000421340 GAGE6Q13070 117 aa14.76□□□□□ -0.05
ABCF3-202ENST00000421340 LINC00588Q9Y4M8 146 aa14.76□□□□□ -0.05
ABCF3-202ENST00000421340 DNAH7Q8WXX0 4024 aa14.76□□□□□ -0.05
ABCF3-202ENST00000421340 C3orf84H3BNL1 204 aa14.75□□□□□ -0.05
ABCF3-202ENST00000421340 PAPPA-AS1Q5QFB9 102 aa14.75□□□□□ -0.05
ABCF3-202ENST00000421340 AMMECR1LQ6DCA0 310 aa14.75□□□□□ -0.05
ABCF3-202ENST00000421340 ZFAND6Q6FIF0 208 aa14.75□□□□□ -0.05
ABCF3-202ENST00000421340 IFI27L1Q96BM0 104 aa14.75□□□□□ -0.05
ABCF3-202ENST00000421340 TMEM101Q96IK0 257 aa14.75□□□□□ -0.05
ABCF3-202ENST00000421340 UPK3BQ9BT76 320 aa14.75□□□□□ -0.05
ABCF3-202ENST00000421340 TMEM262E9PQX1 116 aa14.74□□□□□ -0.05
ABCF3-202ENST00000421340 DGAT2L7PQ6IED9 249 aa14.74□□□□□ -0.05
ABCF3-202ENST00000421340 DYNC2H1Q8NCM8 4307 aaKnown RBP14.74□□□□□ -0.05
ABCF3-202ENST00000421340 OR5A1Q8NGJ0 315 aa14.73□□□□□ -0.05
ABCF3-202ENST00000421340 LINC00173Q6ZV60 143 aa14.72□□□□□ -0.05
ABCF3-202ENST00000421340 FAM104AQ969W3 186 aa14.72□□□□□ -0.05
ABCF3-202ENST00000421340 MAP1LC3CQ9BXW4 147 aa14.72□□□□□ -0.05
ABCF3-202ENST00000421340 IGLV4-3A0A075B6K6 122 aa14.71□□□□□ -0.05
ABCF3-202ENST00000421340 RBX1P62877 108 aa14.71□□□□□ -0.05
ABCF3-202ENST00000421340 Q6ZN92 141 aa14.71□□□□□ -0.05
ABCF3-202ENST00000421340 CDC42SE2Q9NRR3 84 aa14.71□□□□□ -0.05
ABCF3-202ENST00000421340 A0A087WX48 190 aa14.7□□□□□ -0.06
ABCF3-202ENST00000421340 SPATA12Q7Z6I5 190 aa14.7□□□□□ -0.06
ABCF3-202ENST00000421340 ZNF664Q8N3J9 261 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms