RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 UBE2L6O14933 153 aa10.43□□□□□ -0.74
NOD1-204ENST00000419601 AMTP48728 403 aa10.43□□□□□ -0.74
NOD1-204ENST00000419601 FAM74A3Q4VXF1 159 aa10.43□□□□□ -0.74
NOD1-204ENST00000419601 CLPSL2Q6UWE3 100 aa10.43□□□□□ -0.74
NOD1-204ENST00000419601 A0A1B0GUT8 65 aa10.42□□□□□ -0.74
NOD1-204ENST00000419601 HLA-DQA1P01909 254 aa10.42□□□□□ -0.74
NOD1-204ENST00000419601 HAMPP81172 84 aa10.42□□□□□ -0.74
NOD1-204ENST00000419601 REG3AQ06141 175 aa10.42□□□□□ -0.74
NOD1-204ENST00000419601 TMEM241Q24JQ0 296 aa10.42□□□□□ -0.74
NOD1-204ENST00000419601 Q5VSD8 79 aa10.42□□□□□ -0.74
NOD1-204ENST00000419601 DEFB104AQ8WTQ1 72 aa10.42□□□□□ -0.74
NOD1-204ENST00000419601 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
NOD1-204ENST00000419601 SRRM2Q9UQ35 2752 aaKnown RBP10.42□□□□□ -0.74
NOD1-204ENST00000419601 SMR3BP02814 79 aaPredicted RBP10.41□□□□□ -0.74
NOD1-204ENST00000419601 Q6ZSA8 131 aa10.41□□□□□ -0.74
NOD1-204ENST00000419601 C20orf203Q8NBC4 194 aa10.41□□□□□ -0.74
NOD1-204ENST00000419601 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
NOD1-204ENST00000419601 USP17L23D6RBM5 183 aa10.4□□□□□ -0.74
NOD1-204ENST00000419601 NCR2O95944 276 aa10.4□□□□□ -0.74
NOD1-204ENST00000419601 PEA15Q15121 130 aa10.4□□□□□ -0.74
NOD1-204ENST00000419601 ISOC2Q96AB3 205 aa10.4□□□□□ -0.74
NOD1-204ENST00000419601 TMEM191AQ9H0A3 160 aa10.4□□□□□ -0.74
NOD1-204ENST00000419601 SMDT1Q9H4I9 107 aa10.4□□□□□ -0.74
NOD1-204ENST00000419601 IGLV4-60A0A075B6I1 120 aa10.39□□□□□ -0.75
NOD1-204ENST00000419601 TRAV8-4A0A0B4J246 113 aa10.39□□□□□ -0.75
NOD1-204ENST00000419601 SDHAF1A6NFY7 115 aa10.39□□□□□ -0.75
NOD1-204ENST00000419601 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
NOD1-204ENST00000419601 RPL23P62829 140 aaKnown RBP10.39□□□□□ -0.75
NOD1-204ENST00000419601 KRTAP26-1Q6PEX3 210 aa10.39□□□□□ -0.75
NOD1-204ENST00000419601 NAT8Q9UHE5 227 aa10.39□□□□□ -0.75
NOD1-204ENST00000419601 V9GYV3 84 aa10.39□□□□□ -0.75
NOD1-204ENST00000419601 FAT1Q14517 4588 aa10.39□□□□□ -0.75
NOD1-204ENST00000419601 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
NOD1-204ENST00000419601 C9JQL5 133 aa10.38□□□□□ -0.75
NOD1-204ENST00000419601 LINC01620Q4KN68 170 aa10.38□□□□□ -0.75
NOD1-204ENST00000419601 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
NOD1-204ENST00000419601 IGLV10-54A0A075B6I4 117 aa10.37□□□□□ -0.75
NOD1-204ENST00000419601 APCSP02743 223 aa10.37□□□□□ -0.75
NOD1-204ENST00000419601 SRSF3P84103 164 aaKnown RBP10.37□□□□□ -0.75
NOD1-204ENST00000419601 RIGQ13278 110 aa10.37□□□□□ -0.75
NOD1-204ENST00000419601 ADIRFQ15847 76 aa10.37□□□□□ -0.75
NOD1-204ENST00000419601 H7C423 109 aa10.36□□□□□ -0.75
NOD1-204ENST00000419601 PRSS1P07477 247 aa10.36□□□□□ -0.75
NOD1-204ENST00000419601 AMMECR1LQ6DCA0 310 aa10.36□□□□□ -0.75
NOD1-204ENST00000419601 NUP35Q8NFH5 326 aa10.36□□□□□ -0.75
NOD1-204ENST00000419601 MRAP2Q96G30 205 aa10.36□□□□□ -0.75
NOD1-204ENST00000419601 NAT8BQ9UHF3 227 aa10.36□□□□□ -0.75
NOD1-204ENST00000419601 DNAH8Q96JB1 4490 aa10.36□□□□□ -0.75
NOD1-204ENST00000419601 I3L3M4 83 aa10.35□□□□□ -0.75
NOD1-204ENST00000419601 INAFM2P0DMQ5 153 aa10.35□□□□□ -0.75
NOD1-204ENST00000419601 RAB4AP20338 218 aa10.35□□□□□ -0.75
NOD1-204ENST00000419601 PMCHP20382 165 aa10.35□□□□□ -0.75
NOD1-204ENST00000419601 RNF185Q96GF1 192 aa10.35□□□□□ -0.75
NOD1-204ENST00000419601 ST20Q9HBF5 79 aa10.35□□□□□ -0.75
NOD1-204ENST00000419601 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
NOD1-204ENST00000419601 DGAT2L7PQ6IED9 249 aa10.34□□□□□ -0.75
NOD1-204ENST00000419601 AMN1Q8IY45 258 aa10.34□□□□□ -0.75
NOD1-204ENST00000419601 CLRN3Q8NCR9 226 aa10.34□□□□□ -0.75
NOD1-204ENST00000419601 VPS13BQ7Z7G8 4022 aa10.33□□□□□ -0.76
NOD1-204ENST00000419601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.33□□□□□ -0.76
NOD1-204ENST00000419601 IGKV2-29A2NJV5 120 aaPredicted RBP10.33□□□□□ -0.76
NOD1-204ENST00000419601 SMIM27A0A1W2PRY6 76 aa10.32□□□□□ -0.76
NOD1-204ENST00000419601 FGF6P10767 208 aa10.32□□□□□ -0.76
NOD1-204ENST00000419601 ZNF25P17030 456 aaPredicted RBP10.32□□□□□ -0.76
NOD1-204ENST00000419601 RPS10P46783 165 aaKnown RBP10.32□□□□□ -0.76
NOD1-204ENST00000419601 RNASEKQ6P5S7 137 aaKnown RBP10.32□□□□□ -0.76
NOD1-204ENST00000419601 SCXQ7RTU7 201 aa10.32□□□□□ -0.76
NOD1-204ENST00000419601 CHAC1Q9BUX1 264 aa10.32□□□□□ -0.76
NOD1-204ENST00000419601 TRBV27A0A0K0K1C4 114 aa10.31□□□□□ -0.76
NOD1-204ENST00000419601 PPP1R17O96001 155 aa10.31□□□□□ -0.76
NOD1-204ENST00000419601 TSHBP01222 138 aa10.31□□□□□ -0.76
NOD1-204ENST00000419601 POLR2KP53803 58 aaKnown RBP10.31□□□□□ -0.76
NOD1-204ENST00000419601 TMEM242Q9NWH2 141 aa10.31□□□□□ -0.76
NOD1-204ENST00000419601 IGKV3OR2-268A0A0C4DH90 116 aa10.3□□□□□ -0.76
NOD1-204ENST00000419601 A0A1B0GW15 77 aa10.3□□□□□ -0.76
NOD1-204ENST00000419601 ESDP10768 282 aa10.3□□□□□ -0.76
NOD1-204ENST00000419601 LINC00528Q8N1L1 170 aa10.3□□□□□ -0.76
NOD1-204ENST00000419601 C9orf163Q8N9P6 203 aa10.3□□□□□ -0.76
NOD1-204ENST00000419601 BTF3L4Q96K17 158 aa10.3□□□□□ -0.76
NOD1-204ENST00000419601 hDV102S1A0JD36 115 aa10.29□□□□□ -0.76
NOD1-204ENST00000419601 SMKR1H3BMG3 65 aa10.29□□□□□ -0.76
NOD1-204ENST00000419601 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
NOD1-204ENST00000419601 TMEM101Q96IK0 257 aa10.29□□□□□ -0.76
NOD1-204ENST00000419601 GAGE12HA6NDE8 117 aa10.28□□□□□ -0.76
NOD1-204ENST00000419601 VCYO14598 125 aa10.28□□□□□ -0.76
NOD1-204ENST00000419601 CAMPP49913 170 aa10.28□□□□□ -0.76
NOD1-204ENST00000419601 CNBPP62633 177 aaKnown RBP10.28□□□□□ -0.76
NOD1-204ENST00000419601 FAM104BQ5XKR9 115 aa10.28□□□□□ -0.76
NOD1-204ENST00000419601 CIRBP-AS1Q8TBR5 109 aa10.28□□□□□ -0.76
NOD1-204ENST00000419601 AP5S1Q9NUS5 200 aa10.28□□□□□ -0.76
NOD1-204ENST00000419601 C7orf77A4D0Y5 90 aa10.27□□□□□ -0.77
NOD1-204ENST00000419601 RAB14P61106 215 aa10.27□□□□□ -0.77
NOD1-204ENST00000419601 SUMO2P61956 95 aaKnown RBP10.27□□□□□ -0.77
NOD1-204ENST00000419601 MRPL51Q4U2R6 128 aaKnown RBP10.27□□□□□ -0.77
NOD1-204ENST00000419601 CFAP161Q6P656 301 aa10.27□□□□□ -0.77
NOD1-204ENST00000419601 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
NOD1-204ENST00000419601 NRACQ8N912 160 aa10.27□□□□□ -0.77
NOD1-204ENST00000419601 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.77
NOD1-204ENST00000419601 CHCHD10Q8WYQ3 142 aaPredicted RBP10.27□□□□□ -0.77
NOD1-204ENST00000419601 LINC00862A6NCI5 91 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms