RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 COTL1Q14019 142 aa11.39□□□□□ -0.59
PDLIM2-208ENST00000416159 CLRN3Q8NCR9 226 aa11.39□□□□□ -0.59
PDLIM2-208ENST00000416159 TMEM250H0YL14 139 aa11.38□□□□□ -0.59
PDLIM2-208ENST00000416159 UBE2L6O14933 153 aa11.38□□□□□ -0.59
PDLIM2-208ENST00000416159 AKAP14Q86UN6 197 aa11.38□□□□□ -0.59
PDLIM2-208ENST00000416159 C9orf163Q8N9P6 203 aa11.38□□□□□ -0.59
PDLIM2-208ENST00000416159 IGLV4-60A0A075B6I1 120 aa11.37□□□□□ -0.59
PDLIM2-208ENST00000416159 IGLV10-54A0A075B6I4 117 aa11.37□□□□□ -0.59
PDLIM2-208ENST00000416159 AMTP48728 403 aa11.37□□□□□ -0.59
PDLIM2-208ENST00000416159 SMIM15Q7Z3B0 74 aa11.37□□□□□ -0.59
PDLIM2-208ENST00000416159 KRTAP29-1A8MX34 341 aaPredicted RBP11.36□□□□□ -0.59
PDLIM2-208ENST00000416159 GATD1Q8NB37 220 aa11.36□□□□□ -0.59
PDLIM2-208ENST00000416159 GATCO43716 136 aaKnown RBP11.35□□□□□ -0.59
PDLIM2-208ENST00000416159 ALKAL2Q6UX46 152 aa11.35□□□□□ -0.59
PDLIM2-208ENST00000416159 FAM231DQ6ZW35 169 aa11.35□□□□□ -0.59
PDLIM2-208ENST00000416159 GTSF1Q8WW33 167 aa11.35□□□□□ -0.59
PDLIM2-208ENST00000416159 GFRA4Q9GZZ7 299 aa11.35□□□□□ -0.59
PDLIM2-208ENST00000416159 A8MWL6 223 aa11.34□□□□□ -0.59
PDLIM2-208ENST00000416159 KRTAP10-4P60372 401 aaPredicted RBP11.34□□□□□ -0.59
PDLIM2-208ENST00000416159 TEX261Q6UWH6 196 aa11.34□□□□□ -0.59
PDLIM2-208ENST00000416159 LYPD6BQ8NI32 183 aa11.34□□□□□ -0.59
PDLIM2-208ENST00000416159 TRAV26-2A0A0B4J265 109 aa11.33□□□□□ -0.6
PDLIM2-208ENST00000416159 hDV102S1A0JD36 115 aa11.32□□□□□ -0.6
PDLIM2-208ENST00000416159 NCR2O95944 276 aa11.32□□□□□ -0.6
PDLIM2-208ENST00000416159 CNBPP62633 177 aaKnown RBP11.32□□□□□ -0.6
PDLIM2-208ENST00000416159 SDIM1Q6ZPB5 146 aa11.32□□□□□ -0.6
PDLIM2-208ENST00000416159 AP5S1Q9NUS5 200 aa11.32□□□□□ -0.6
PDLIM2-208ENST00000416159 FOXA3P55318 350 aaPredicted RBP11.31□□□□□ -0.6
PDLIM2-208ENST00000416159 CT83Q5H943 113 aa11.31□□□□□ -0.6
PDLIM2-208ENST00000416159 RPL39LQ96EH5 51 aaKnown RBP11.31□□□□□ -0.6
PDLIM2-208ENST00000416159 hCG_2014768A0A024R1R8 64 aa11.3□□□□□ -0.6
PDLIM2-208ENST00000416159 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.3□□□□□ -0.6
PDLIM2-208ENST00000416159 H7C423 109 aa11.3□□□□□ -0.6
PDLIM2-208ENST00000416159 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
PDLIM2-208ENST00000416159 CEBPGP53567 150 aa11.3□□□□□ -0.6
PDLIM2-208ENST00000416159 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
PDLIM2-208ENST00000416159 RPL37AP61513 92 aaKnown RBP11.29□□□□□ -0.6
PDLIM2-208ENST00000416159 AMMECR1LQ6DCA0 310 aa11.29□□□□□ -0.6
PDLIM2-208ENST00000416159 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
PDLIM2-208ENST00000416159 BORCS7Q96B45 105 aa11.29□□□□□ -0.6
PDLIM2-208ENST00000416159 EIF5A2Q9GZV4 153 aaKnown RBP11.29□□□□□ -0.6
PDLIM2-208ENST00000416159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.29□□□□□ -0.6
PDLIM2-208ENST00000416159 APCSP02743 223 aa11.28□□□□□ -0.6
PDLIM2-208ENST00000416159 IGHV3-64A0A075B6Q5 118 aa11.27□□□□□ -0.61
PDLIM2-208ENST00000416159 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
PDLIM2-208ENST00000416159 OXTP01178 125 aa11.27□□□□□ -0.61
PDLIM2-208ENST00000416159 PMCHP20382 165 aa11.27□□□□□ -0.61
PDLIM2-208ENST00000416159 RNASEKQ6P5S7 137 aaKnown RBP11.27□□□□□ -0.61
PDLIM2-208ENST00000416159 SMIM7Q9BQ49 75 aa11.27□□□□□ -0.61
PDLIM2-208ENST00000416159 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 TRBV6-5A0A0K0K1A5 114 aa11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 PANO1I0J062 215 aa11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 I3L3M4 83 aa11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 SLPIP03973 132 aa11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 TSKUQ8WUA8 353 aa11.26□□□□□ -0.61
PDLIM2-208ENST00000416159 A0A1B0GUT8 65 aa11.25□□□□□ -0.61
PDLIM2-208ENST00000416159 FAM231BA6NCW3 169 aa11.25□□□□□ -0.61
PDLIM2-208ENST00000416159 FGF6P10767 208 aa11.25□□□□□ -0.61
PDLIM2-208ENST00000416159 LINC01551Q86U37 167 aa11.25□□□□□ -0.61
PDLIM2-208ENST00000416159 FAM210AQ96ND0 272 aa11.25□□□□□ -0.61
PDLIM2-208ENST00000416159 OSTCQ9NRP0 149 aa11.25□□□□□ -0.61
PDLIM2-208ENST00000416159 ZNF727A8MUV8 499 aa11.24□□□□□ -0.61
PDLIM2-208ENST00000416159 HIGD1CA8MV81 97 aa11.24□□□□□ -0.61
PDLIM2-208ENST00000416159 ZNF25P17030 456 aaPredicted RBP11.24□□□□□ -0.61
PDLIM2-208ENST00000416159 CHCHD10Q8WYQ3 142 aaPredicted RBP11.24□□□□□ -0.61
PDLIM2-208ENST00000416159 DPH3Q96FX2 82 aa11.24□□□□□ -0.61
PDLIM2-208ENST00000416159 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
PDLIM2-208ENST00000416159 ST20Q9HBF5 79 aa11.24□□□□□ -0.61
PDLIM2-208ENST00000416159 SRP19P09132 144 aaKnown RBP11.23□□□□□ -0.61
PDLIM2-208ENST00000416159 C15orf56Q8N910 161 aa11.23□□□□□ -0.61
PDLIM2-208ENST00000416159 RNF185Q96GF1 192 aa11.23□□□□□ -0.61
PDLIM2-208ENST00000416159 TMEM101Q96IK0 257 aa11.23□□□□□ -0.61
PDLIM2-208ENST00000416159 BTF3L4Q96K17 158 aa11.23□□□□□ -0.61
PDLIM2-208ENST00000416159 ESDP10768 282 aa11.21□□□□□ -0.61
PDLIM2-208ENST00000416159 RAB4AP20338 218 aa11.21□□□□□ -0.61
PDLIM2-208ENST00000416159 RPS10P46783 165 aaKnown RBP11.21□□□□□ -0.61
PDLIM2-208ENST00000416159 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
PDLIM2-208ENST00000416159 MRAP2Q96G30 205 aa11.21□□□□□ -0.61
PDLIM2-208ENST00000416159 GAS8-AS1O95177 125 aa11.2□□□□□ -0.62
PDLIM2-208ENST00000416159 TSHBP01222 138 aa11.2□□□□□ -0.62
PDLIM2-208ENST00000416159 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-208ENST00000416159 A0A087WYN8 130 aa11.19□□□□□ -0.62
PDLIM2-208ENST00000416159 RIGQ13278 110 aa11.19□□□□□ -0.62
PDLIM2-208ENST00000416159 HIGD2BQ4VC39 106 aa11.19□□□□□ -0.62
PDLIM2-208ENST00000416159 SPACA4Q8TDM5 124 aa11.19□□□□□ -0.62
PDLIM2-208ENST00000416159 TMEM242Q9NWH2 141 aa11.19□□□□□ -0.62
PDLIM2-208ENST00000416159 V9GYV3 84 aa11.19□□□□□ -0.62
PDLIM2-208ENST00000416159 GVQW2A0A096LPI5 108 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 TRBV27A0A0K0K1C4 114 aa11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 FOXI1Q12951 378 aa11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 TMEM241Q24JQ0 296 aa11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 FAM74A3Q4VXF1 159 aa11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 SERTAD4-AS1Q5TG53 156 aa11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
PDLIM2-208ENST00000416159 LINC00959A0A1B0GUT2 108 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms