RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 Q0VG73 95 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 DEFB135Q30KP9 77 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 PRNTQ86SH4 94 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 GATD1Q8NB37 220 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 VSTM2AQ8TAG5 236 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 DYNLRB2Q8TF09 96 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 SRSF12Q8WXF0 261 aaKnown RBP4.03□□□□□ -1.76
EPHA4-204ENST00000415749 FXYD5Q96DB9 178 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 C14orf144Q96I85 54 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 PFDN5Q99471 154 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 FAM103A1Q9BTL3 118 aaKnown RBP4.03□□□□□ -1.76
EPHA4-204ENST00000415749 ZNF430Q9H8G1 570 aaPredicted RBP4.03□□□□□ -1.76
EPHA4-204ENST00000415749 TRAPPC1Q9Y5R8 145 aa4.03□□□□□ -1.76
EPHA4-204ENST00000415749 IGLV1-50A0A075B6I6 118 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 TRAV5A0A0B4J249 113 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 SMIM27A0A1W2PRY6 76 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 A8MWP6 167 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 C8orf87E5RJ46 101 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 SLC17A3O00476 420 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 NDUFA3O95167 84 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 CRYBB3P26998 211 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 DDTP30046 118 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 GNG4P50150 75 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 TAS2R45P59539 299 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 ERHP84090 104 aaKnown RBP4.02□□□□□ -1.77
EPHA4-204ENST00000415749 PLGLAQ15195 96 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 CENPWQ5EE01 88 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 C10orf55Q5SWW7 151 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 FAM162BQ5T6X4 162 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 TMEM256Q8N2U0 113 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 ZNF664Q8N3J9 261 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 LINC01587Q99440 93 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 TRGV9Q99603 122 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 GNB1LQ9BYB4 327 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 COMMD5Q9GZQ3 224 aa4.02□□□□□ -1.77
EPHA4-204ENST00000415749 C16orf90A8MZG2 172 aa4.01□□□□□ -1.77
EPHA4-204ENST00000415749 CBLN1P23435 193 aa4.01□□□□□ -1.77
EPHA4-204ENST00000415749 ZNF90Q03938 601 aa4.01□□□□□ -1.77
EPHA4-204ENST00000415749 TMEM136Q6ZRR5 245 aa4.01□□□□□ -1.77
EPHA4-204ENST00000415749 PCP2Q8IVA1 136 aa4.01□□□□□ -1.77
EPHA4-204ENST00000415749 Q8N976 141 aa4.01□□□□□ -1.77
EPHA4-204ENST00000415749 RNF5Q99942 180 aa4.01□□□□□ -1.77
EPHA4-204ENST00000415749 TRAV8-3A0A0A6YYJ7 113 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 A0A1B0GVX0 72 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 C2orf70A6NJV1 201 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 F2Z2F3 143 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 TSTD3H0UI37 97 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 H3BUA1 57 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 MT-ND6P03923 174 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 REG1AP05451 166 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 TLX1NBP0CAT3 122 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 PYYP10082 97 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 FXYD3Q14802 87 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 LGALS9BQ3B8N2 356 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 VMA21Q3ZAQ7 101 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 C10orf113Q5VZT2 155 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 RASL11AQ6T310 242 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 OR8I2Q8N0Y5 310 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 ORAOV1Q8WV07 137 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 USMG5Q96IX5 58 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 C2orf88Q9BSF0 95 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 RNASE7Q9H1E1 156 aaKnown RBP4□□□□□ -1.77
EPHA4-204ENST00000415749 PRO1933Q9H354 126 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 ZNF492Q9P255 531 aa4□□□□□ -1.77
EPHA4-204ENST00000415749 TRBV6-1A0A0K0K1D8 114 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 A0A0U1RQV1 116 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 GRIFINA4D1Z8 144 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 C19orf71A6NCJ1 209 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 I3L2K1 104 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 OR7C2O60412 319 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 INAFM2P0DMQ5 153 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 RPL27AP46776 148 aaKnown RBP3.99□□□□□ -1.77
EPHA4-204ENST00000415749 TCL1AP56279 114 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 UBE2L3P68036 154 aaKnown RBP3.99□□□□□ -1.77
EPHA4-204ENST00000415749 IQCJQ1A5X6 159 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 IBA57Q5T440 356 aaKnown RBP3.99□□□□□ -1.77
EPHA4-204ENST00000415749 C1orf194Q5T5A4 169 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 GDF5OSQ5U4N7 250 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 ANAPC13Q9BS18 74 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 TMEM14CQ9P0S9 112 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 EPDR1Q9UM22 224 aa3.99□□□□□ -1.77
EPHA4-204ENST00000415749 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
EPHA4-204ENST00000415749 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 AGRNO00468 2067 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 CORTO00230 105 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 DEFB4AO15263 64 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 COX7A2P2O60397 106 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 HLA-DQA1P01909 254 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 GPX1P07203 203 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 IGLC1P0CG04 106 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 P0DMU3 169 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 FAM231AP0DMU4 169 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 FAM231CP0DMU5 169 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 HIST1H1EP10412 219 aaKnown RBP3.98□□□□□ -1.77
EPHA4-204ENST00000415749 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
EPHA4-204ENST00000415749 RANP62826 216 aaKnown RBP3.98□□□□□ -1.77
EPHA4-204ENST00000415749 KLK9Q2XQG4 91 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 LINC00305Q7Z4B0 112 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 NIT1Q86X76 327 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 OR11H2Q8NH07 326 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms