RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 PRSS47A8MTI9 375 aa14.11□□□□□ -0.15
PTPRU-203ENST00000415600 IGHV3-53P01767 116 aa14.11□□□□□ -0.15
PTPRU-203ENST00000415600 GATA1P15976 413 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-203ENST00000415600 TRGV4A0A0C4DH28 118 aa14.1□□□□□ -0.15
PTPRU-203ENST00000415600 TRAV26-2A0A0B4J265 109 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 SIVA1O15304 175 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 SMIM17P0DL12 118 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 LINC00315P59091 139 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 PMCHL1Q16048 86 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 NXT2Q9NPJ8 142 aaKnown RBP14.09□□□□□ -0.15
PTPRU-203ENST00000415600 LINC01546A6NGU7 62 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 SCGB1D1O95968 90 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 MGPP08493 103 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 CRYBA4P53673 196 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 KRTAP17-1Q9BYP8 105 aa14.09□□□□□ -0.15
PTPRU-203ENST00000415600 KRTDAPP60985 99 aa14.08□□□□□ -0.16
PTPRU-203ENST00000415600 RASL10AQ92737 203 aa14.08□□□□□ -0.16
PTPRU-203ENST00000415600 PTH2Q96A98 100 aa14.08□□□□□ -0.16
PTPRU-203ENST00000415600 JPT2Q9H910 190 aa14.08□□□□□ -0.16
PTPRU-203ENST00000415600 C3orf79P0CE67 100 aa14.07□□□□□ -0.16
PTPRU-203ENST00000415600 PIK3CD-AS1Q5SR53 167 aa14.07□□□□□ -0.16
PTPRU-203ENST00000415600 NEGR1Q7Z3B1 354 aa14.07□□□□□ -0.16
PTPRU-203ENST00000415600 Q8N8P6 123 aa14.07□□□□□ -0.16
PTPRU-203ENST00000415600 TRAV9-2A0A087WT02 112 aa14.06□□□□□ -0.16
PTPRU-203ENST00000415600 LEPROTL1O95214 131 aa14.06□□□□□ -0.16
PTPRU-203ENST00000415600 FHL2Q14192 279 aa14.06□□□□□ -0.16
PTPRU-203ENST00000415600 PPP1R17O96001 155 aa14.05□□□□□ -0.16
PTPRU-203ENST00000415600 ZNF876PQ49A33 203 aa14.05□□□□□ -0.16
PTPRU-203ENST00000415600 KRTAP1-5Q9BYS1 174 aa14.05□□□□□ -0.16
PTPRU-203ENST00000415600 M0R2P5 195 aa14.05□□□□□ -0.16
PTPRU-203ENST00000415600 Q8N976 141 aa14.05□□□□□ -0.16
PTPRU-203ENST00000415600 C20orf78Q9BR46 151 aa14.05□□□□□ -0.16
PTPRU-203ENST00000415600 A0A087WWL8 130 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 A0A096LNJ9 63 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 K7EP13 123 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 EREGO14944 169 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 CDK2AP2O75956 126 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 CRYGDP07320 174 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 S100A12P80511 92 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 SPATA12Q7Z6I5 190 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 HSPB8Q9UJY1 196 aa14.04□□□□□ -0.16
PTPRU-203ENST00000415600 TRAV4A0A0B4J268 109 aa14.03□□□□□ -0.16
PTPRU-203ENST00000415600 SUMO4Q6EEV6 95 aa14.03□□□□□ -0.16
PTPRU-203ENST00000415600 SH2D6Q7Z4S9 175 aa14.03□□□□□ -0.16
PTPRU-203ENST00000415600 NFE4Q86UQ8 179 aa14.03□□□□□ -0.16
PTPRU-203ENST00000415600 OR4C5Q8NGB2 326 aa14.03□□□□□ -0.16
PTPRU-203ENST00000415600 HBDP02042 147 aa14.02□□□□□ -0.16
PTPRU-203ENST00000415600 SUMO2P61956 95 aaKnown RBP14.02□□□□□ -0.16
PTPRU-203ENST00000415600 LYPD5Q6UWN5 251 aa14.02□□□□□ -0.16
PTPRU-203ENST00000415600 SMIM2Q9BVW6 85 aa14.02□□□□□ -0.16
PTPRU-203ENST00000415600 GYPEP15421 78 aa14.01□□□□□ -0.17
PTPRU-203ENST00000415600 FAM74A4Q5TZK3 123 aa14.01□□□□□ -0.17
PTPRU-203ENST00000415600 RPL39LQ96EH5 51 aaKnown RBP14.01□□□□□ -0.17
PTPRU-203ENST00000415600 ZNF479Q96JC4 524 aa14.01□□□□□ -0.17
PTPRU-203ENST00000415600 TMEM70Q9BUB7 260 aa14.01□□□□□ -0.17
PTPRU-203ENST00000415600 DYNC1H1Q14204 4646 aaKnown RBP14.01□□□□□ -0.17
PTPRU-203ENST00000415600 A8MWV9 139 aa14□□□□□ -0.17
PTPRU-203ENST00000415600 K7EQD1 137 aa14□□□□□ -0.17
PTPRU-203ENST00000415600 LINC00173Q6ZV60 143 aa14□□□□□ -0.17
PTPRU-203ENST00000415600 PCP4L1A6NKN8 68 aa14□□□□□ -0.17
PTPRU-203ENST00000415600 F5H697 171 aa14□□□□□ -0.17
PTPRU-203ENST00000415600 RPL32P62910 135 aaKnown RBP14□□□□□ -0.17
PTPRU-203ENST00000415600 TEX43Q6ZNM6 134 aa14□□□□□ -0.17
PTPRU-203ENST00000415600 SYS1-DBNDD2H3BUS1 97 aa13.99□□□□□ -0.17
PTPRU-203ENST00000415600 CIDEAO60543 219 aa13.99□□□□□ -0.17
PTPRU-203ENST00000415600 FCER1GP30273 86 aa13.99□□□□□ -0.17
PTPRU-203ENST00000415600 ZNF56Q15929 161 aa13.99□□□□□ -0.17
PTPRU-203ENST00000415600 MAP1LC3CQ9BXW4 147 aa13.99□□□□□ -0.17
PTPRU-203ENST00000415600 K7EMI3 77 aa13.98□□□□□ -0.17
PTPRU-203ENST00000415600 TRBV6-5A0A0K0K1A5 114 aa13.97□□□□□ -0.17
PTPRU-203ENST00000415600 LAGE3Q14657 143 aa13.97□□□□□ -0.17
PTPRU-203ENST00000415600 ST20Q9HBF5 79 aa13.97□□□□□ -0.17
PTPRU-203ENST00000415600 M0QY20 66 aa13.96□□□□□ -0.17
PTPRU-203ENST00000415600 UFSP1Q6NVU6 142 aa13.96□□□□□ -0.17
PTPRU-203ENST00000415600 PET117Q6UWS5 81 aa13.96□□□□□ -0.17
PTPRU-203ENST00000415600 C10orf126Q8N4M7 172 aa13.96□□□□□ -0.17
PTPRU-203ENST00000415600 PKIAP61925 76 aa13.96□□□□□ -0.18
PTPRU-203ENST00000415600 ZNF664Q8N3J9 261 aa13.96□□□□□ -0.18
PTPRU-203ENST00000415600 POLR2KP53803 58 aaKnown RBP13.95□□□□□ -0.18
PTPRU-203ENST00000415600 C20orf202A1L168 122 aa13.94□□□□□ -0.18
PTPRU-203ENST00000415600 RHODO00212 210 aa13.94□□□□□ -0.18
PTPRU-203ENST00000415600 TCAPO15273 167 aa13.94□□□□□ -0.18
PTPRU-203ENST00000415600 RS1O15537 224 aa13.94□□□□□ -0.18
PTPRU-203ENST00000415600 ORMDL2Q53FV1 153 aa13.94□□□□□ -0.18
PTPRU-203ENST00000415600 CFAP126Q5VTH2 177 aa13.94□□□□□ -0.18
PTPRU-203ENST00000415600 PRADC1Q9BSG0 188 aa13.94□□□□□ -0.18
PTPRU-203ENST00000415600 PGPEP1Q9NXJ5 209 aa13.94□□□□□ -0.18
PTPRU-203ENST00000415600 H7C1H1 209 aa13.93□□□□□ -0.18
PTPRU-203ENST00000415600 MAPKAPK5-AS1Q8N8E1 139 aa13.93□□□□□ -0.18
PTPRU-203ENST00000415600 TSTD3H0UI37 97 aa13.92□□□□□ -0.18
PTPRU-203ENST00000415600 TIRAPP58753 221 aa13.92□□□□□ -0.18
PTPRU-203ENST00000415600 Q6ZRN7 208 aaPredicted RBP13.92□□□□□ -0.18
PTPRU-203ENST00000415600 VAMP8Q9BV40 100 aa13.92□□□□□ -0.18
PTPRU-203ENST00000415600 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
PTPRU-203ENST00000415600 IFI27L1Q96BM0 104 aa13.92□□□□□ -0.18
PTPRU-203ENST00000415600 SDHAF1A6NFY7 115 aa13.91□□□□□ -0.18
PTPRU-203ENST00000415600 VCYO14598 125 aa13.91□□□□□ -0.18
PTPRU-203ENST00000415600 RHOHQ15669 191 aa13.91□□□□□ -0.18
PTPRU-203ENST00000415600 LINC01545Q5VT33 79 aa13.91□□□□□ -0.18
PTPRU-203ENST00000415600 ZFP2Q6ZN57 461 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms