RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 TEX261Q6UWH6 196 aa6.95□□□□□ -1.3
LMCD1-203ENST00000415597 C9orf62Q8N4C0 152 aa6.95□□□□□ -1.3
LMCD1-203ENST00000415597 BCL2P10415 239 aa6.94□□□□□ -1.3
LMCD1-203ENST00000415597 CNBPP62633 177 aaKnown RBP6.94□□□□□ -1.3
LMCD1-203ENST00000415597 SDIM1Q6ZPB5 146 aa6.94□□□□□ -1.3
LMCD1-203ENST00000415597 C20orf203Q8NBC4 194 aa6.94□□□□□ -1.3
LMCD1-203ENST00000415597 RNF185Q96GF1 192 aa6.94□□□□□ -1.3
LMCD1-203ENST00000415597 HERC1Q15751 4861 aa6.94□□□□□ -1.3
LMCD1-203ENST00000415597 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
LMCD1-203ENST00000415597 FAT1Q14517 4588 aa6.93□□□□□ -1.3
LMCD1-203ENST00000415597 SLC51BQ86UW2 128 aa6.93□□□□□ -1.3
LMCD1-203ENST00000415597 NUDT10Q8NFP7 164 aa6.93□□□□□ -1.3
LMCD1-203ENST00000415597 BORCS7Q96B45 105 aa6.93□□□□□ -1.3
LMCD1-203ENST00000415597 NUDT11Q96G61 164 aa6.93□□□□□ -1.3
LMCD1-203ENST00000415597 RPP21Q9H633 154 aaKnown RBP6.93□□□□□ -1.3
LMCD1-203ENST00000415597 PKIGQ9Y2B9 76 aa6.93□□□□□ -1.3
LMCD1-203ENST00000415597 IGLV4-60A0A075B6I1 120 aa6.92□□□□□ -1.3
LMCD1-203ENST00000415597 IGKV3OR2-268A0A0C4DH90 116 aa6.92□□□□□ -1.3
LMCD1-203ENST00000415597 H7C423 109 aa6.92□□□□□ -1.3
LMCD1-203ENST00000415597 NCR2O95944 276 aa6.92□□□□□ -1.3
LMCD1-203ENST00000415597 RNASEKQ6P5S7 137 aaKnown RBP6.92□□□□□ -1.3
LMCD1-203ENST00000415597 KRTAP26-1Q6PEX3 210 aa6.92□□□□□ -1.3
LMCD1-203ENST00000415597 C7orf33Q8WU49 177 aa6.92□□□□□ -1.3
LMCD1-203ENST00000415597 BTF3L4Q96K17 158 aa6.92□□□□□ -1.3
LMCD1-203ENST00000415597 GAGE12HA6NDE8 117 aa6.91□□□□□ -1.3
LMCD1-203ENST00000415597 APCSP02743 223 aa6.91□□□□□ -1.3
LMCD1-203ENST00000415597 CTRLP40313 264 aa6.91□□□□□ -1.3
LMCD1-203ENST00000415597 TMEM101Q96IK0 257 aa6.91□□□□□ -1.3
LMCD1-203ENST00000415597 PLA2G2DQ9UNK4 145 aa6.91□□□□□ -1.3
LMCD1-203ENST00000415597 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.91□□□□□ -1.3
LMCD1-203ENST00000415597 A8MWL6 223 aa6.9□□□□□ -1.3
LMCD1-203ENST00000415597 GATCO43716 136 aaKnown RBP6.9□□□□□ -1.3
LMCD1-203ENST00000415597 PMCHP20382 165 aa6.9□□□□□ -1.3
LMCD1-203ENST00000415597 RPS10P46783 165 aaKnown RBP6.9□□□□□ -1.3
LMCD1-203ENST00000415597 KRTAP10-4P60372 401 aaPredicted RBP6.9□□□□□ -1.3
LMCD1-203ENST00000415597 Q6ZRU5 148 aa6.9□□□□□ -1.3
LMCD1-203ENST00000415597 FAM210AQ96ND0 272 aa6.9□□□□□ -1.3
LMCD1-203ENST00000415597 CNFNQ9BYD5 112 aa6.9□□□□□ -1.3
LMCD1-203ENST00000415597 BLOC1S1P78537 153 aa6.89□□□□□ -1.31
LMCD1-203ENST00000415597 GATD1Q8NB37 220 aa6.89□□□□□ -1.31
LMCD1-203ENST00000415597 OCC1Q8TAD7 63 aa6.89□□□□□ -1.31
LMCD1-203ENST00000415597 RNASE7Q9H1E1 156 aaKnown RBP6.89□□□□□ -1.31
LMCD1-203ENST00000415597 MYCBP2O75592 4640 aa6.89□□□□□ -1.31
LMCD1-203ENST00000415597 TRBV20OR9-2A0A075B6H5 130 aa6.88□□□□□ -1.31
LMCD1-203ENST00000415597 A0A087WYN8 130 aa6.88□□□□□ -1.31
LMCD1-203ENST00000415597 I3L3M4 83 aa6.88□□□□□ -1.31
LMCD1-203ENST00000415597 ZNF25P17030 456 aaPredicted RBP6.88□□□□□ -1.31
LMCD1-203ENST00000415597 SMAGPQ0VAQ4 97 aa6.88□□□□□ -1.31
LMCD1-203ENST00000415597 TCTE3Q8IZS6 198 aa6.88□□□□□ -1.31
LMCD1-203ENST00000415597 CHCHD10Q8WYQ3 142 aaPredicted RBP6.88□□□□□ -1.31
LMCD1-203ENST00000415597 LINC00474Q9P2X8 69 aa6.88□□□□□ -1.31
LMCD1-203ENST00000415597 TRAV26-2A0A0B4J265 109 aa6.87□□□□□ -1.31
LMCD1-203ENST00000415597 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
LMCD1-203ENST00000415597 A6NJY4 79 aa6.87□□□□□ -1.31
LMCD1-203ENST00000415597 TMEM250H0YL14 139 aa6.87□□□□□ -1.31
LMCD1-203ENST00000415597 NDUFS6O75380 124 aaKnown RBP6.87□□□□□ -1.31
LMCD1-203ENST00000415597 FGF6P10767 208 aa6.87□□□□□ -1.31
LMCD1-203ENST00000415597 CIRBPQ14011 172 aaKnown RBP6.87□□□□□ -1.31
LMCD1-203ENST00000415597 GFRA4Q9GZZ7 299 aa6.87□□□□□ -1.31
LMCD1-203ENST00000415597 CEBPGP53567 150 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 COX6A2Q02221 97 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 SS18Q15532 418 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 MAJINQ3KP22 176 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 FAM231DQ6ZW35 169 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 SPACA4Q8TDM5 124 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 GTSF1Q8WW33 167 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 ST20Q9HBF5 79 aa6.86□□□□□ -1.31
LMCD1-203ENST00000415597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
LMCD1-203ENST00000415597 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
LMCD1-203ENST00000415597 PANO1I0J062 215 aa6.85□□□□□ -1.31
LMCD1-203ENST00000415597 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
LMCD1-203ENST00000415597 CT83Q5H943 113 aa6.85□□□□□ -1.31
LMCD1-203ENST00000415597 Q6ZNX1 250 aa6.85□□□□□ -1.31
LMCD1-203ENST00000415597 RPL39LQ96EH5 51 aaKnown RBP6.85□□□□□ -1.31
LMCD1-203ENST00000415597 MRAP2Q96G30 205 aa6.85□□□□□ -1.31
LMCD1-203ENST00000415597 PLAC8Q9NZF1 115 aa6.85□□□□□ -1.31
LMCD1-203ENST00000415597 IGHV1-58A0A0C4DH39 117 aa6.84□□□□□ -1.31
LMCD1-203ENST00000415597 IGKV2-24A0A0C4DH68 120 aa6.84□□□□□ -1.31
LMCD1-203ENST00000415597 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.31
LMCD1-203ENST00000415597 K7EN84 100 aa6.84□□□□□ -1.31
LMCD1-203ENST00000415597 PPP1R17O96001 155 aa6.84□□□□□ -1.31
LMCD1-203ENST00000415597 SLPIP03973 132 aa6.84□□□□□ -1.31
LMCD1-203ENST00000415597 STPG4Q8N801 248 aa6.84□□□□□ -1.31
LMCD1-203ENST00000415597 C15orf56Q8N910 161 aa6.84□□□□□ -1.31
LMCD1-203ENST00000415597 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
LMCD1-203ENST00000415597 GVQW2A0A096LPI5 108 aaPredicted RBP6.83□□□□□ -1.32
LMCD1-203ENST00000415597 TRBV6-5A0A0K0K1A5 114 aa6.83□□□□□ -1.32
LMCD1-203ENST00000415597 A0A1B0GUT8 65 aa6.83□□□□□ -1.32
LMCD1-203ENST00000415597 FCER1GP30273 86 aa6.83□□□□□ -1.32
LMCD1-203ENST00000415597 XCL1P47992 114 aa6.83□□□□□ -1.32
LMCD1-203ENST00000415597 HNRNPA3P51991 378 aaKnown RBP6.83□□□□□ -1.32
LMCD1-203ENST00000415597 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
LMCD1-203ENST00000415597 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
LMCD1-203ENST00000415597 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
LMCD1-203ENST00000415597 FAM231BA6NCW3 169 aa6.82□□□□□ -1.32
LMCD1-203ENST00000415597 PHOX2AO14813 284 aa6.82□□□□□ -1.32
LMCD1-203ENST00000415597 CCL25O15444 150 aa6.82□□□□□ -1.32
LMCD1-203ENST00000415597 MALP21145 153 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms