RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 GAGE12IP0CL82 117 aa10.04□□□□□ -0.8
LIMS2-206ENST00000409754 RPL39P62891 51 aaKnown RBP10.04□□□□□ -0.8
LIMS2-206ENST00000409754 DEFB104AQ8WTQ1 72 aa10.04□□□□□ -0.8
LIMS2-206ENST00000409754 MRPL35Q9NZE8 188 aaKnown RBP10.04□□□□□ -0.8
LIMS2-206ENST00000409754 Q9UF83 564 aa10.04□□□□□ -0.8
LIMS2-206ENST00000409754 TGP01266 2768 aa10.04□□□□□ -0.8
LIMS2-206ENST00000409754 TRGV2A0A075B6R0 118 aa10.04□□□□□ -0.8
LIMS2-206ENST00000409754 F8VRH5 84 aa10.04□□□□□ -0.8
LIMS2-206ENST00000409754 K7EIL1 84 aa10.04□□□□□ -0.8
LIMS2-206ENST00000409754 K7EQD1 137 aa10.04□□□□□ -0.8
LIMS2-206ENST00000409754 PLNP26678 52 aa10.03□□□□□ -0.8
LIMS2-206ENST00000409754 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
LIMS2-206ENST00000409754 LINC00612Q8N6U2 182 aa10.03□□□□□ -0.8
LIMS2-206ENST00000409754 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
LIMS2-206ENST00000409754 ANKRD39Q53RE8 183 aa10.02□□□□□ -0.81
LIMS2-206ENST00000409754 SLC25A34Q6PIV7 304 aa10.02□□□□□ -0.81
LIMS2-206ENST00000409754 STPG4Q8N801 248 aa10.02□□□□□ -0.81
LIMS2-206ENST00000409754 HHLA3Q9XRX5 114 aa10.02□□□□□ -0.81
LIMS2-206ENST00000409754 CHTOPQ9Y3Y2 248 aaKnown RBP10.02□□□□□ -0.81
LIMS2-206ENST00000409754 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
LIMS2-206ENST00000409754 PRSS29PA6NIE9 313 aa10.01□□□□□ -0.81
LIMS2-206ENST00000409754 IGHV4-30-4P0DP06 118 aa10.01□□□□□ -0.81
LIMS2-206ENST00000409754 COX8AP10176 69 aa10.01□□□□□ -0.81
LIMS2-206ENST00000409754 EMP1P54849 157 aa10.01□□□□□ -0.81
LIMS2-206ENST00000409754 RPL36AP83881 106 aaKnown RBP10.01□□□□□ -0.81
LIMS2-206ENST00000409754 SLC25A29Q8N8R3 303 aa10.01□□□□□ -0.81
LIMS2-206ENST00000409754 RPL36ALQ969Q0 106 aaKnown RBP10.01□□□□□ -0.81
LIMS2-206ENST00000409754 TRBV6-4A0A1B0GX49 114 aa10□□□□□ -0.81
LIMS2-206ENST00000409754 COTL1Q14019 142 aa10□□□□□ -0.81
LIMS2-206ENST00000409754 PMVKQ15126 192 aa10□□□□□ -0.81
LIMS2-206ENST00000409754 DEFB135Q30KP9 77 aa10□□□□□ -0.81
LIMS2-206ENST00000409754 ZNRF2Q8NHG8 242 aa10□□□□□ -0.81
LIMS2-206ENST00000409754 ZMAT5Q9UDW3 170 aaKnown RBP10□□□□□ -0.81
LIMS2-206ENST00000409754 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
LIMS2-206ENST00000409754 CHCHD7Q9BUK0 85 aa10□□□□□ -0.81
LIMS2-206ENST00000409754 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
LIMS2-206ENST00000409754 HUWE1Q7Z6Z7 4374 aaKnown RBP9.99□□□□□ -0.81
LIMS2-206ENST00000409754 TENM3Q9P273 2699 aa9.99□□□□□ -0.81
LIMS2-206ENST00000409754 TRGV4A0A0C4DH28 118 aa9.99□□□□□ -0.81
LIMS2-206ENST00000409754 M0R143 59 aa9.99□□□□□ -0.81
LIMS2-206ENST00000409754 NPSP0C0P6 89 aa9.99□□□□□ -0.81
LIMS2-206ENST00000409754 CTAG1AP78358 180 aa9.99□□□□□ -0.81
LIMS2-206ENST00000409754 ZC2HC1BQ5TFG8 222 aa9.99□□□□□ -0.81
LIMS2-206ENST00000409754 DAZ4Q86SG3 579 aaKnown RBP9.99□□□□□ -0.81
LIMS2-206ENST00000409754 PHLDA1Q8WV24 401 aaPredicted RBP9.99□□□□□ -0.81
LIMS2-206ENST00000409754 CST9LQ9H4G1 147 aa9.99□□□□□ -0.81
LIMS2-206ENST00000409754 DAZ3Q9NR90 486 aaKnown RBP9.99□□□□□ -0.81
LIMS2-206ENST00000409754 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
LIMS2-206ENST00000409754 LYRM9A8MSI8 78 aa9.98□□□□□ -0.81
LIMS2-206ENST00000409754 UBE2D3P61077 147 aa9.98□□□□□ -0.81
LIMS2-206ENST00000409754 UBE2D2P62837 147 aa9.98□□□□□ -0.81
LIMS2-206ENST00000409754 FHL2Q14192 279 aa9.98□□□□□ -0.81
LIMS2-206ENST00000409754 OR11H2Q8NH07 326 aa9.98□□□□□ -0.81
LIMS2-206ENST00000409754 SNHG12Q9BXW3 62 aa9.98□□□□□ -0.81
LIMS2-206ENST00000409754 A8MZ25 164 aa9.97□□□□□ -0.81
LIMS2-206ENST00000409754 LBHQ53QV2 105 aaPredicted RBP9.97□□□□□ -0.81
LIMS2-206ENST00000409754 PAPPA-AS1Q5QFB9 102 aa9.97□□□□□ -0.81
LIMS2-206ENST00000409754 RNF183Q96D59 192 aa9.97□□□□□ -0.81
LIMS2-206ENST00000409754 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 GAGE12JA6NER3 117 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 EREGO14944 169 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 DLEU1O43261 78 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 DEFB130BP0DP73 79 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 DEFB130AP0DP74 79 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 FGF6P10767 208 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 MIFP14174 115 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 CRYBA4P53673 196 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 GAGE1Q13065 139 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 GAGE4Q13068 117 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 GAGE5Q13069 117 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 GAGE13Q4V321 117 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 SPANXA1Q9NS26 97 aa9.96□□□□□ -0.81
LIMS2-206ENST00000409754 IGHV4-28A0A0C4DH34 117 aa9.96□□□□□ -0.82
LIMS2-206ENST00000409754 BOD1L2Q8IYS8 172 aa9.96□□□□□ -0.82
LIMS2-206ENST00000409754 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.82
LIMS2-206ENST00000409754 IGLV4-69A0A075B6H9 119 aa9.95□□□□□ -0.82
LIMS2-206ENST00000409754 NMUP48645 174 aa9.95□□□□□ -0.82
LIMS2-206ENST00000409754 FAM222AQ5U5X8 452 aa9.95□□□□□ -0.82
LIMS2-206ENST00000409754 OPRPNQ99935 248 aaPredicted RBP9.95□□□□□ -0.82
LIMS2-206ENST00000409754 TP73-AS1Q9UF72 201 aa9.95□□□□□ -0.82
LIMS2-206ENST00000409754 UBE2D4Q9Y2X8 147 aa9.95□□□□□ -0.82
LIMS2-206ENST00000409754 NBEAL2Q6ZNJ1 2754 aa9.95□□□□□ -0.82
LIMS2-206ENST00000409754 IGKV2D-26A0A0A0MRZ7 120 aa9.94□□□□□ -0.82
LIMS2-206ENST00000409754 TCTAP57738 103 aa9.94□□□□□ -0.82
LIMS2-206ENST00000409754 Q8NAQ8 132 aa9.94□□□□□ -0.82
LIMS2-206ENST00000409754 C2orf88Q9BSF0 95 aa9.94□□□□□ -0.82
LIMS2-206ENST00000409754 VCX2Q9H322 139 aa9.94□□□□□ -0.82
LIMS2-206ENST00000409754 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.93□□□□□ -0.82
LIMS2-206ENST00000409754 IGKV2-29A2NJV5 120 aaPredicted RBP9.93□□□□□ -0.82
LIMS2-206ENST00000409754 LINC00694P0DN24 101 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 FAM104AQ969W3 186 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 AMELXQ99217 191 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 TIMM21Q9BVV7 248 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 C11orf86A6NJI1 115 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 SIVA1O15304 175 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 NFE4Q86UQ8 179 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 PCP2Q8IVA1 136 aa9.93□□□□□ -0.82
LIMS2-206ENST00000409754 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms