RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SMIM7Q9BQ49 75 aa5.96□□□□□ -1.46
SNORD88A-201ENST00000408314 FAM231BA6NCW3 169 aa5.95□□□□□ -1.46
SNORD88A-201ENST00000408314 H7C423 109 aa5.95□□□□□ -1.46
SNORD88A-201ENST00000408314 AMMECR1LQ6DCA0 310 aa5.95□□□□□ -1.46
SNORD88A-201ENST00000408314 GFRA4Q9GZZ7 299 aa5.95□□□□□ -1.46
SNORD88A-201ENST00000408314 AP5S1Q9NUS5 200 aa5.95□□□□□ -1.46
SNORD88A-201ENST00000408314 DMBT1Q9UGM3 2413 aaPredicted RBP5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 ZNF727A8MUV8 499 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 APCSP02743 223 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 FAM74A3Q4VXF1 159 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 CLPSL2Q6UWE3 100 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 LINC00528Q8N1L1 170 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 TSKUQ8WUA8 353 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 CHAC1Q9BUX1 264 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 FAM30AQ9NZY2 134 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 DNAH8Q96JB1 4490 aa5.94□□□□□ -1.46
SNORD88A-201ENST00000408314 A0A1B0GUT8 65 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 PPP1R17O96001 155 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 ZNF25P17030 456 aaPredicted RBP5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 FOXA3P55318 350 aaPredicted RBP5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 HAMPP81172 84 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 SMAGPQ0VAQ4 97 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 CFAP161Q6P656 301 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 LINC01551Q86U37 167 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 GATD1Q8NB37 220 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 C20orf203Q8NBC4 194 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 GTSF1Q8WW33 167 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 BTF3L4Q96K17 158 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 OSTCQ9NRP0 149 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
SNORD88A-201ENST00000408314 SDHAF1A6NFY7 115 aa5.92□□□□□ -1.46
SNORD88A-201ENST00000408314 HIGD1CA8MV81 97 aa5.92□□□□□ -1.46
SNORD88A-201ENST00000408314 SCXQ7RTU7 201 aa5.92□□□□□ -1.46
SNORD88A-201ENST00000408314 DEFB104AQ8WTQ1 72 aa5.92□□□□□ -1.46
SNORD88A-201ENST00000408314 MRAP2Q96G30 205 aa5.92□□□□□ -1.46
SNORD88A-201ENST00000408314 TMEM101Q96IK0 257 aa5.92□□□□□ -1.46
SNORD88A-201ENST00000408314 IGLV10-54A0A075B6I4 117 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 TRAV26-2A0A0B4J265 109 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 TRBV6-5A0A0K0K1A5 114 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 I3L3M4 83 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 PRSS1P07477 247 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 PMCHP20382 165 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 CNBPP62633 177 aaKnown RBP5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 RIGQ13278 110 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 RNASEKQ6P5S7 137 aaKnown RBP5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 C9orf163Q8N9P6 203 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 TMEM191AQ9H0A3 160 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 SMDT1Q9H4I9 107 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 ST20Q9HBF5 79 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 SRRM2Q9UQ35 2752 aaKnown RBP5.91□□□□□ -1.46
SNORD88A-201ENST00000408314 IGLV4-60A0A075B6I1 120 aa5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 A0A1B0GW15 77 aa5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 SRP19P09132 144 aaKnown RBP5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 PEA15Q15121 130 aa5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 TMEM241Q24JQ0 296 aa5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 LINC01620Q4KN68 170 aa5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 KRTAP26-1Q6PEX3 210 aa5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 RPL39LQ96EH5 51 aaKnown RBP5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 NAT8BQ9UHF3 227 aa5.9□□□□□ -1.46
SNORD88A-201ENST00000408314 IGHV3-64A0A075B6Q5 118 aa5.89□□□□□ -1.47
SNORD88A-201ENST00000408314 PPP1R2P9O14990 202 aa5.89□□□□□ -1.47
SNORD88A-201ENST00000408314 S100A8P05109 93 aa5.89□□□□□ -1.47
SNORD88A-201ENST00000408314 FGF6P10767 208 aa5.89□□□□□ -1.47
SNORD88A-201ENST00000408314 CIRBP-AS1Q8TBR5 109 aa5.89□□□□□ -1.47
SNORD88A-201ENST00000408314 NAT8Q9UHE5 227 aa5.89□□□□□ -1.47
SNORD88A-201ENST00000408314 GAGE12HA6NDE8 117 aa5.88□□□□□ -1.47
SNORD88A-201ENST00000408314 J3QL48 77 aa5.88□□□□□ -1.47
SNORD88A-201ENST00000408314 TCAPO15273 167 aa5.88□□□□□ -1.47
SNORD88A-201ENST00000408314 ADIRFQ15847 76 aa5.88□□□□□ -1.47
SNORD88A-201ENST00000408314 OR5A1Q8NGJ0 315 aa5.88□□□□□ -1.47
SNORD88A-201ENST00000408314 ISOC2Q96AB3 205 aa5.88□□□□□ -1.47
SNORD88A-201ENST00000408314 RNF185Q96GF1 192 aa5.88□□□□□ -1.47
SNORD88A-201ENST00000408314 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
SNORD88A-201ENST00000408314 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 IGKV3OR2-268A0A0C4DH90 116 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 TRBV27A0A0K0K1C4 114 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 IGKV2-29A2NJV5 120 aaPredicted RBP5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 C7orf77A4D0Y5 90 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 VCYO14598 125 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 RAB4AP20338 218 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 FCER1GP30273 86 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 CHCHD10Q8WYQ3 142 aaPredicted RBP5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 TMEM18Q96B42 140 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 KIR2DL4Q99706 377 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 V9GYV3 84 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 HERC1Q15751 4861 aa5.87□□□□□ -1.47
SNORD88A-201ENST00000408314 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 LINC00862A6NCI5 91 aa5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 ESDP10768 282 aa5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 RPL37AP61513 92 aaKnown RBP5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 RPL23P62829 140 aaKnown RBP5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 SS18Q15532 418 aa5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 MRPL52Q86TS9 123 aaKnown RBP5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 AMN1Q8IY45 258 aa5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 NUP35Q8NFH5 326 aa5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 TMEM242Q9NWH2 141 aa5.86□□□□□ -1.47
SNORD88A-201ENST00000408314 F8W036 122 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms