RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SYNJ2BPP57105 145 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 A0A0U1RRA0 63 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 G3V318 75 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 ATP6V0E1O15342 81 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 Q8N6K4 173 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 ZFHX3Q15911 3703 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 LRBAP50851 2863 aa9.4□□□□□ -0.9
HERC3-203ENST00000407637 Q9HAA7 133 aa9.39□□□□□ -0.91
HERC3-203ENST00000407637 TTC28Q96AY4 2481 aa9.39□□□□□ -0.91
HERC3-203ENST00000407637 APC2O95996 2303 aa9.39□□□□□ -0.91
HERC3-203ENST00000407637 USP17L23D6RBM5 183 aa9.39□□□□□ -0.91
HERC3-203ENST00000407637 APRG1Q8IVJ8 170 aa9.39□□□□□ -0.91
HERC3-203ENST00000407637 ATMQ13315 3056 aa9.39□□□□□ -0.91
HERC3-203ENST00000407637 ODF3BA8MYP8 253 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 SOCS3O14543 225 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 DNAL4O96015 105 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 FHL2Q14192 279 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 LINC01561Q8N1V8 128 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 Q8N9W7 124 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 LY6G5BQ8NDX9 201 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 TIMM17BO60830 172 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 IGFL2Q6UWQ7 119 aa9.38□□□□□ -0.91
HERC3-203ENST00000407637 E7EQL1 145 aa9.37□□□□□ -0.91
HERC3-203ENST00000407637 FAM222AQ5U5X8 452 aa9.37□□□□□ -0.91
HERC3-203ENST00000407637 HOXD3P31249 432 aaPredicted RBP9.37□□□□□ -0.91
HERC3-203ENST00000407637 PRIMA1Q86XR5 153 aa9.37□□□□□ -0.91
HERC3-203ENST00000407637 BDP1A6H8Y1 2624 aa9.37□□□□□ -0.91
HERC3-203ENST00000407637 MALP21145 153 aa9.36□□□□□ -0.91
HERC3-203ENST00000407637 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
HERC3-203ENST00000407637 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
HERC3-203ENST00000407637 J3QLI3 93 aa9.36□□□□□ -0.91
HERC3-203ENST00000407637 K7ENP7 123 aa9.36□□□□□ -0.91
HERC3-203ENST00000407637 PFN2P35080 140 aa9.36□□□□□ -0.91
HERC3-203ENST00000407637 Q6JHZ5 121 aa9.36□□□□□ -0.91
HERC3-203ENST00000407637 UNQ9165/PRO28630Q6UXU0 137 aa9.36□□□□□ -0.91
HERC3-203ENST00000407637 C14orf132Q9NPU4 83 aa9.36□□□□□ -0.91
HERC3-203ENST00000407637 SPTBN1Q01082 2364 aaKnown RBP9.36□□□□□ -0.91
HERC3-203ENST00000407637 TINCRA0A1B0GVN0 87 aa9.35□□□□□ -0.91
HERC3-203ENST00000407637 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
HERC3-203ENST00000407637 LINC00846Q9NV44 126 aa9.35□□□□□ -0.91
HERC3-203ENST00000407637 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
HERC3-203ENST00000407637 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
HERC3-203ENST00000407637 KLLNB2CW77 178 aa9.34□□□□□ -0.91
HERC3-203ENST00000407637 NDUFA1O15239 70 aa9.34□□□□□ -0.91
HERC3-203ENST00000407637 FAM223AQ8IWN6 122 aa9.34□□□□□ -0.91
HERC3-203ENST00000407637 PRO0628Q9UI54 55 aa9.34□□□□□ -0.91
HERC3-203ENST00000407637 C1orf43Q9BWL3 253 aa9.34□□□□□ -0.91
HERC3-203ENST00000407637 CIRBPQ14011 172 aaKnown RBP9.33□□□□□ -0.92
HERC3-203ENST00000407637 DEFB123Q8N688 67 aa9.33□□□□□ -0.92
HERC3-203ENST00000407637 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
HERC3-203ENST00000407637 IGHV3-16A0A0C4DH30 117 aa9.33□□□□□ -0.92
HERC3-203ENST00000407637 C9orf85Q96MD7 179 aa9.33□□□□□ -0.92
HERC3-203ENST00000407637 Q9H8V8 135 aa9.33□□□□□ -0.92
HERC3-203ENST00000407637 LY6HO94772 140 aa9.32□□□□□ -0.92
HERC3-203ENST00000407637 TRBV12-3P01733 135 aa9.32□□□□□ -0.92
HERC3-203ENST00000407637 IGHG2P01859 326 aa9.32□□□□□ -0.92
HERC3-203ENST00000407637 KLK9Q9UKQ9 250 aa9.32□□□□□ -0.92
HERC3-203ENST00000407637 MINOS1Q5TGZ0 78 aa9.32□□□□□ -0.92
HERC3-203ENST00000407637 HILS1P60008 231 aa9.31□□□□□ -0.92
HERC3-203ENST00000407637 DEFB109BQ30KR1 87 aa9.31□□□□□ -0.92
HERC3-203ENST00000407637 ARRDC1-AS1Q9H2J1 176 aa9.31□□□□□ -0.92
HERC3-203ENST00000407637 IGHV3-73A0A0B4J1V6 119 aa9.31□□□□□ -0.92
HERC3-203ENST00000407637 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.3□□□□□ -0.92
HERC3-203ENST00000407637 IGKV2-29A2NJV5 120 aaPredicted RBP9.3□□□□□ -0.92
HERC3-203ENST00000407637 KLK9Q2XQG4 91 aa9.3□□□□□ -0.92
HERC3-203ENST00000407637 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
HERC3-203ENST00000407637 TRAV12-2A0A075B6T6 113 aa9.3□□□□□ -0.92
HERC3-203ENST00000407637 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
HERC3-203ENST00000407637 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.3□□□□□ -0.92
HERC3-203ENST00000407637 TMEM243Q9BU79 118 aa9.3□□□□□ -0.92
HERC3-203ENST00000407637 UBE2D4Q9Y2X8 147 aa9.3□□□□□ -0.92
HERC3-203ENST00000407637 ASH1LQ9NR48 2969 aaKnown RBP9.29□□□□□ -0.92
HERC3-203ENST00000407637 GHRHP01286 108 aa9.29□□□□□ -0.92
HERC3-203ENST00000407637 BSNQ9UPA5 3926 aa9.29□□□□□ -0.92
HERC3-203ENST00000407637 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
HERC3-203ENST00000407637 NDUFC2O95298 119 aa9.29□□□□□ -0.92
HERC3-203ENST00000407637 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
HERC3-203ENST00000407637 A0A087WYN8 130 aa9.28□□□□□ -0.92
HERC3-203ENST00000407637 PROK1P58294 105 aa9.28□□□□□ -0.92
HERC3-203ENST00000407637 PRORYQ9H606 182 aa9.28□□□□□ -0.92
HERC3-203ENST00000407637 IGKV3-20P01619 116 aa9.28□□□□□ -0.92
HERC3-203ENST00000407637 ZNF415Q09FC8 603 aa9.28□□□□□ -0.92
HERC3-203ENST00000407637 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
HERC3-203ENST00000407637 WFDC9Q8NEX5 89 aa9.28□□□□□ -0.92
HERC3-203ENST00000407637 NDUFC2-KCTD14E9PQ53 114 aa9.27□□□□□ -0.93
HERC3-203ENST00000407637 F8WDY8 70 aa9.27□□□□□ -0.93
HERC3-203ENST00000407637 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
HERC3-203ENST00000407637 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
HERC3-203ENST00000407637 RPL28P46779 137 aaKnown RBP9.27□□□□□ -0.93
HERC3-203ENST00000407637 Q9UF83 564 aa9.27□□□□□ -0.93
HERC3-203ENST00000407637 COL6A6A6NMZ7 2263 aa9.26□□□□□ -0.93
HERC3-203ENST00000407637 DOPEY2Q9Y3R5 2298 aa9.26□□□□□ -0.93
HERC3-203ENST00000407637 NCR3O14931 201 aa9.26□□□□□ -0.93
HERC3-203ENST00000407637 COX6A2Q02221 97 aa9.26□□□□□ -0.93
HERC3-203ENST00000407637 CHCHD7Q9BUK0 85 aa9.26□□□□□ -0.93
HERC3-203ENST00000407637 PTPRZ1P23471 2315 aaPredicted RBP9.26□□□□□ -0.93
HERC3-203ENST00000407637 LINC00467Q9BRT7 94 aa9.26□□□□□ -0.93
HERC3-203ENST00000407637 HIST2H2BCQ6DN03 193 aa9.25□□□□□ -0.93
HERC3-203ENST00000407637 HIST2H2BDQ6DRA6 164 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms