RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 OR11H2Q8NH07 326 aa17.68■□□□□ 0.42
DNMT3A-206ENST00000406659 OVOL2Q9BRP0 275 aa17.68■□□□□ 0.42
DNMT3A-206ENST00000406659 HIGD1BQ9P298 99 aa17.68■□□□□ 0.42
DNMT3A-206ENST00000406659 PYGO1Q9Y3Y4 419 aa17.67■□□□□ 0.42
DNMT3A-206ENST00000406659 FLNBO75369 2602 aaKnown RBP17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 BAHCC1Q9P281 2608 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 IGHV3-38A0A0C4DH36 116 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 GAGE12BA1L429 117 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 K7EQD1 137 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 GAGE7O76087 117 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 GAGE12FP0CL80 117 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 GAGE12GP0CL81 117 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 GAGE12IP0CL82 117 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 MAPKAPK5-AS1Q8N8E1 139 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 ZNRF2Q8NHG8 242 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 VCX2Q9H322 139 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 NOTCH3Q9UM47 2321 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 IGLV4-3A0A075B6K6 122 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 TRGV2A0A075B6R0 118 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 E9PLD3 99 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 CHCHD7Q9BUK0 85 aa17.66■□□□□ 0.42
DNMT3A-206ENST00000406659 TRBV25-1A0A075B6N4 114 aa17.65■□□□□ 0.42
DNMT3A-206ENST00000406659 TRBV10-1A0A0K0K1A3 114 aa17.65■□□□□ 0.42
DNMT3A-206ENST00000406659 ZMAT5Q9UDW3 170 aaKnown RBP17.65■□□□□ 0.42
DNMT3A-206ENST00000406659 TRBV7-3A0A075B6L6 115 aa17.64■□□□□ 0.41
DNMT3A-206ENST00000406659 HERVK_113P61574 105 aa17.64■□□□□ 0.41
DNMT3A-206ENST00000406659 SEC11AP67812 179 aa17.64■□□□□ 0.41
DNMT3A-206ENST00000406659 RPL36AP83881 106 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-206ENST00000406659 RPL36ALQ969Q0 106 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-206ENST00000406659 ORAOV1Q8WV07 137 aa17.63■□□□□ 0.41
DNMT3A-206ENST00000406659 PRADC1Q9BSG0 188 aa17.63■□□□□ 0.41
DNMT3A-206ENST00000406659 CHAC1Q9BUX1 264 aa17.63■□□□□ 0.41
DNMT3A-206ENST00000406659 CIDEAO60543 219 aa17.62■□□□□ 0.41
DNMT3A-206ENST00000406659 TMEM170BQ5T4T1 132 aa17.62■□□□□ 0.41
DNMT3A-206ENST00000406659 NFE4Q86UQ8 179 aa17.61■□□□□ 0.41
DNMT3A-206ENST00000406659 SLC25A29Q8N8R3 303 aa17.61■□□□□ 0.41
DNMT3A-206ENST00000406659 SPANXA1Q9NS26 97 aa17.61■□□□□ 0.41
DNMT3A-206ENST00000406659 COX11Q9Y6N1 276 aa17.61■□□□□ 0.41
DNMT3A-206ENST00000406659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.61■□□□□ 0.41
DNMT3A-206ENST00000406659 MYMXA0A1B0GTQ4 84 aa17.61■□□□□ 0.41
DNMT3A-206ENST00000406659 IGKV2-29A2NJV5 120 aaPredicted RBP17.61■□□□□ 0.41
DNMT3A-206ENST00000406659 NPSP0C0P6 89 aa17.61■□□□□ 0.41
DNMT3A-206ENST00000406659 CRYBA4P53673 196 aa17.6■□□□□ 0.41
DNMT3A-206ENST00000406659 CEMP1Q6PRD7 247 aaPredicted RBP17.59■□□□□ 0.41
DNMT3A-206ENST00000406659 Q6ZVH6 145 aa17.59■□□□□ 0.41
DNMT3A-206ENST00000406659 TENM1Q9UKZ4 2725 aa17.59■□□□□ 0.41
DNMT3A-206ENST00000406659 A6NDN8 102 aa17.58■□□□□ 0.41
DNMT3A-206ENST00000406659 WFDC9Q8NEX5 89 aa17.58■□□□□ 0.41
DNMT3A-206ENST00000406659 AMELXQ99217 191 aa17.58■□□□□ 0.41
DNMT3A-206ENST00000406659 UBE2D4Q9Y2X8 147 aa17.58■□□□□ 0.41
DNMT3A-206ENST00000406659 TAX1BP3O14907 124 aa17.58■□□□□ 0.4
DNMT3A-206ENST00000406659 DAZ4Q86SG3 579 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-206ENST00000406659 DAZ3Q9NR90 486 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-206ENST00000406659 F8P00451 2351 aa17.58■□□□□ 0.4
DNMT3A-206ENST00000406659 TRGV4A0A0C4DH28 118 aa17.57■□□□□ 0.4
DNMT3A-206ENST00000406659 GAGE12JA6NER3 117 aa17.57■□□□□ 0.4
DNMT3A-206ENST00000406659 GAGE1Q13065 139 aa17.57■□□□□ 0.4
DNMT3A-206ENST00000406659 GAGE4Q13068 117 aa17.57■□□□□ 0.4
DNMT3A-206ENST00000406659 GAGE5Q13069 117 aa17.57■□□□□ 0.4
DNMT3A-206ENST00000406659 GAGE13Q4V321 117 aa17.57■□□□□ 0.4
DNMT3A-206ENST00000406659 VWFP04275 2813 aa17.57■□□□□ 0.4
DNMT3A-206ENST00000406659 TEP1Q99973 2627 aaKnown RBP17.56■□□□□ 0.4
DNMT3A-206ENST00000406659 LINC00469Q8N7U9 141 aa17.56■□□□□ 0.4
DNMT3A-206ENST00000406659 FAM104AQ969W3 186 aa17.56■□□□□ 0.4
DNMT3A-206ENST00000406659 A0A0J9YXV3 536 aa17.56■□□□□ 0.4
DNMT3A-206ENST00000406659 SMIM9A6NGZ8 99 aa17.56■□□□□ 0.4
DNMT3A-206ENST00000406659 UBE2D3P61077 147 aa17.56■□□□□ 0.4
DNMT3A-206ENST00000406659 UBE2D2P62837 147 aa17.56■□□□□ 0.4
DNMT3A-206ENST00000406659 ATRQ13535 2644 aa17.55■□□□□ 0.4
DNMT3A-206ENST00000406659 TRBV6-4A0A1B0GX49 114 aa17.54■□□□□ 0.4
DNMT3A-206ENST00000406659 ZNF815PA8K554 130 aa17.54■□□□□ 0.4
DNMT3A-206ENST00000406659 GCSHP23434 173 aa17.54■□□□□ 0.4
DNMT3A-206ENST00000406659 KIR2DL5BQ8NHK3 375 aa17.53■□□□□ 0.4
DNMT3A-206ENST00000406659 APOC4P55056 127 aa17.53■□□□□ 0.4
DNMT3A-206ENST00000406659 RNASE13Q5GAN3 156 aaKnown RBP17.53■□□□□ 0.4
DNMT3A-206ENST00000406659 X6R8D5 127 aa17.53■□□□□ 0.4
DNMT3A-206ENST00000406659 ZNF22P17026 224 aaPredicted RBP17.52■□□□□ 0.4
DNMT3A-206ENST00000406659 TAL2Q16559 108 aa17.52■□□□□ 0.4
DNMT3A-206ENST00000406659 TIMM21Q9BVV7 248 aa17.52■□□□□ 0.4
DNMT3A-206ENST00000406659 DGAT2L7PQ6IED9 249 aa17.51■□□□□ 0.39
DNMT3A-206ENST00000406659 TMEM223A0PJW6 202 aa17.51■□□□□ 0.39
DNMT3A-206ENST00000406659 DEFB130BP0DP73 79 aa17.51■□□□□ 0.39
DNMT3A-206ENST00000406659 DEFB130AP0DP74 79 aa17.51■□□□□ 0.39
DNMT3A-206ENST00000406659 FHL2Q14192 279 aa17.51■□□□□ 0.39
DNMT3A-206ENST00000406659 Q6ZUT4 128 aa17.51■□□□□ 0.39
DNMT3A-206ENST00000406659 CEND1Q8N111 149 aa17.51■□□□□ 0.39
DNMT3A-206ENST00000406659 HIST1H4GQ99525 98 aa17.51■□□□□ 0.39
DNMT3A-206ENST00000406659 MRPS36P82909 103 aaKnown RBP17.5■□□□□ 0.39
DNMT3A-206ENST00000406659 WIPF1O43516 503 aa17.49■□□□□ 0.39
DNMT3A-206ENST00000406659 NTM-AS1Q6ZSK4 140 aa17.49■□□□□ 0.39
DNMT3A-206ENST00000406659 LOC100131303A0A0U1RQF7 123 aa17.48■□□□□ 0.39
DNMT3A-206ENST00000406659 H3BRM9 83 aa17.48■□□□□ 0.39
DNMT3A-206ENST00000406659 PTTG1IPP53801 180 aa17.48■□□□□ 0.39
DNMT3A-206ENST00000406659 SCGB1D4Q6XE38 83 aa17.48■□□□□ 0.39
DNMT3A-206ENST00000406659 TM2D2Q9BX73 214 aa17.48■□□□□ 0.39
DNMT3A-206ENST00000406659 LEPROTO15243 131 aa17.48■□□□□ 0.39
DNMT3A-206ENST00000406659 FXYD2P54710 66 aa17.48■□□□□ 0.39
DNMT3A-206ENST00000406659 LINC00612Q8N6U2 182 aa17.48■□□□□ 0.39
DNMT3A-206ENST00000406659 J3QQQ9 107 aa17.47■□□□□ 0.39
DNMT3A-206ENST00000406659 LGALS3P17931 250 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms