RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 Q8N9W7 124 aa10.3□□□□□ -0.76
LDLRAD4-203ENST00000399848 KRTAP27-1Q3LI81 207 aa10.3□□□□□ -0.76
LDLRAD4-203ENST00000399848 ATP5EP2Q5VTU8 51 aa10.3□□□□□ -0.76
LDLRAD4-203ENST00000399848 RITA1Q96K30 269 aa10.3□□□□□ -0.76
LDLRAD4-203ENST00000399848 TRAV23DV6A0A075B6W5 121 aa10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 NUPR1O60356 82 aa10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 ZNF843Q8N446 348 aa10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 LINC01548A6NM66 108 aa10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 HIST2H2BDQ6DRA6 164 aa10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 NDUFV3P56181 108 aaKnown RBP10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 RNASE8Q8TDE3 154 aaKnown RBP10.29□□□□□ -0.76
LDLRAD4-203ENST00000399848 UQCRQO14949 82 aa10.28□□□□□ -0.76
LDLRAD4-203ENST00000399848 IGHV4-61A0A0C4DH41 118 aa10.28□□□□□ -0.76
LDLRAD4-203ENST00000399848 COL4A4P53420 1690 aaPredicted RBP10.28□□□□□ -0.76
LDLRAD4-203ENST00000399848 DAZAP2Q15038 168 aaPredicted RBP10.28□□□□□ -0.76
LDLRAD4-203ENST00000399848 PLA2G2AP14555 144 aa10.28□□□□□ -0.76
LDLRAD4-203ENST00000399848 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
LDLRAD4-203ENST00000399848 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
LDLRAD4-203ENST00000399848 LRCOL1A6NCL2 159 aa10.27□□□□□ -0.76
LDLRAD4-203ENST00000399848 DEFB135Q30KP9 77 aa10.27□□□□□ -0.76
LDLRAD4-203ENST00000399848 UFSP1Q6NVU6 142 aa10.27□□□□□ -0.77
LDLRAD4-203ENST00000399848 PRO0255Q9UI72 69 aa10.27□□□□□ -0.77
LDLRAD4-203ENST00000399848 INAFM1C9JVW0 142 aa10.27□□□□□ -0.77
LDLRAD4-203ENST00000399848 IGHV4-30-2A0A087WSY4 118 aa10.27□□□□□ -0.77
LDLRAD4-203ENST00000399848 TCL1BO95988 128 aa10.27□□□□□ -0.77
LDLRAD4-203ENST00000399848 WT1P19544 449 aaPredicted RBP10.27□□□□□ -0.77
LDLRAD4-203ENST00000399848 ATP5EP56381 51 aaPredicted RBP10.26□□□□□ -0.77
LDLRAD4-203ENST00000399848 ESM1Q9NQ30 184 aa10.26□□□□□ -0.77
LDLRAD4-203ENST00000399848 MRPL55Q7Z7F7 128 aaKnown RBP10.26□□□□□ -0.77
LDLRAD4-203ENST00000399848 C20orf203Q8NBC4 194 aa10.26□□□□□ -0.77
LDLRAD4-203ENST00000399848 F8P00451 2351 aa10.25□□□□□ -0.77
LDLRAD4-203ENST00000399848 ADAMTS20P59510 1910 aa10.25□□□□□ -0.77
LDLRAD4-203ENST00000399848 H7C423 109 aa10.25□□□□□ -0.77
LDLRAD4-203ENST00000399848 V9GYY9 64 aa10.25□□□□□ -0.77
LDLRAD4-203ENST00000399848 PRAC2D3DTV9 90 aa10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 SPATA12Q7Z6I5 190 aa10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 NUPR2A6NF83 97 aa10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 LRP4O75096 1905 aa10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 TRAV26-1A0A087WT03 109 aa10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 SPRNQ5BIV9 151 aa10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 TLN2Q9Y4G6 2542 aa10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 NDUFC1O43677 76 aa10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 GRNP28799 593 aaKnown RBP10.24□□□□□ -0.77
LDLRAD4-203ENST00000399848 FAM236DA0A1B0GTK5 79 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 FAM236CP0DP71 79 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 IGFL2Q6UWQ7 119 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 P0DMU3 169 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 FAM231AP0DMU4 169 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 FAM231CP0DMU5 169 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 Q6ZSR3 168 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 C3orf22Q8N5N4 141 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 A0A0J9YX75 114 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 FAM240AA0A1B0GVK7 77 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 ODF3Q96PU9 254 aa10.23□□□□□ -0.77
LDLRAD4-203ENST00000399848 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
LDLRAD4-203ENST00000399848 MPLKIPQ8TAP9 179 aa10.22□□□□□ -0.77
LDLRAD4-203ENST00000399848 C10orf105Q8TEF2 133 aa10.22□□□□□ -0.77
LDLRAD4-203ENST00000399848 ZFAND2AQ8N6M9 145 aa10.22□□□□□ -0.77
LDLRAD4-203ENST00000399848 TEX49A0A1B0GTD5 131 aa10.22□□□□□ -0.77
LDLRAD4-203ENST00000399848 TTTY13Q9BZ97 58 aa10.22□□□□□ -0.77
LDLRAD4-203ENST00000399848 ACANP16112 2415 aa10.21□□□□□ -0.77
LDLRAD4-203ENST00000399848 A0A0J9YXY3 114 aa10.21□□□□□ -0.78
LDLRAD4-203ENST00000399848 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.78
LDLRAD4-203ENST00000399848 LOXL1Q08397 574 aaPredicted RBP10.2□□□□□ -0.78
LDLRAD4-203ENST00000399848 DNAJC9-AS1A6NH13 148 aa10.2□□□□□ -0.78
LDLRAD4-203ENST00000399848 UBE2D3P61077 147 aa10.2□□□□□ -0.78
LDLRAD4-203ENST00000399848 JMJD1CQ15652 2540 aa10.2□□□□□ -0.78
LDLRAD4-203ENST00000399848 LTBP2Q14767 1821 aa10.2□□□□□ -0.78
LDLRAD4-203ENST00000399848 C20orf197Q8N268 126 aa10.19□□□□□ -0.78
LDLRAD4-203ENST00000399848 PTH2Q96A98 100 aa10.19□□□□□ -0.78
LDLRAD4-203ENST00000399848 IGLV1-47P01700 117 aa10.19□□□□□ -0.78
LDLRAD4-203ENST00000399848 LINC00269Q8N2A0 174 aa10.19□□□□□ -0.78
LDLRAD4-203ENST00000399848 REG3AQ06141 175 aa10.19□□□□□ -0.78
LDLRAD4-203ENST00000399848 IGLC6P0CF74 106 aa10.18□□□□□ -0.78
LDLRAD4-203ENST00000399848 IGLV2-14P01704 120 aa10.18□□□□□ -0.78
LDLRAD4-203ENST00000399848 DEFB4AO15263 64 aa10.18□□□□□ -0.78
LDLRAD4-203ENST00000399848 A0A1B0GXF2 115 aa10.18□□□□□ -0.78
LDLRAD4-203ENST00000399848 SMIM9A6NGZ8 99 aa10.18□□□□□ -0.78
LDLRAD4-203ENST00000399848 PIEZO2Q9H5I5 2752 aa10.18□□□□□ -0.78
LDLRAD4-203ENST00000399848 MAP6D1Q9H9H5 199 aa10.17□□□□□ -0.78
LDLRAD4-203ENST00000399848 PIK3CD-AS1Q5SR53 167 aa10.17□□□□□ -0.78
LDLRAD4-203ENST00000399848 HIGD2AQ9BW72 106 aa10.17□□□□□ -0.78
LDLRAD4-203ENST00000399848 IBA57-AS1B1ANH7 110 aa10.17□□□□□ -0.78
LDLRAD4-203ENST00000399848 LYRM9A8MSI8 78 aa10.17□□□□□ -0.78
LDLRAD4-203ENST00000399848 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
LDLRAD4-203ENST00000399848 SIRPDQ9H106 197 aa10.16□□□□□ -0.78
LDLRAD4-203ENST00000399848 UNQ9165/PRO28630Q6UXU0 137 aa10.16□□□□□ -0.78
LDLRAD4-203ENST00000399848 TLN1Q9Y490 2541 aaKnown RBP10.16□□□□□ -0.78
LDLRAD4-203ENST00000399848 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
LDLRAD4-203ENST00000399848 SPRY4Q9C004 299 aa10.16□□□□□ -0.78
LDLRAD4-203ENST00000399848 E7EUB6 86 aa10.16□□□□□ -0.78
LDLRAD4-203ENST00000399848 IGKV2-24A0A0C4DH68 120 aa10.15□□□□□ -0.78
LDLRAD4-203ENST00000399848 ENHOQ6UWT2 76 aa10.15□□□□□ -0.78
LDLRAD4-203ENST00000399848 NAV2Q8IVL1 2488 aa10.15□□□□□ -0.78
LDLRAD4-203ENST00000399848 NCOR2Q9Y618 2525 aa10.15□□□□□ -0.78
LDLRAD4-203ENST00000399848 LY6G6DO95868 133 aa10.15□□□□□ -0.79
LDLRAD4-203ENST00000399848 ANKRD17O75179 2603 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms