RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 Q6ZVQ6 151 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 C5orf38Q86SI9 138 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 LYPD1Q8N2G4 141 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 NPYP01303 97 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 APELAP0DMC3 54 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 ZFP2Q6ZN57 461 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 C2CD3Q4AC94 2353 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 H0Y9J4 135 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 IGFL3Q6UXB1 125 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 LINC00322Q6ZN03 302 aaPredicted RBP4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 TOMM6Q96B49 74 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 URB1-AS1Q96HZ7 61 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 DOPEY1Q5JWR5 2465 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 Q8N2B8 174 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 Q9HAA7 133 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 MTORP42345 2549 aa4.94□□□□□ -1.62
TM9SF4-202ENST00000398022 TRIAP1O43715 76 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 CD24P25063 80 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 ZNF80P51504 273 aaPredicted RBP4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 MP68P56378 58 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 UBE2D3P61077 147 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 UBE2D2P62837 147 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 FAM104BQ5XKR9 115 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 LINC00173Q6ZV60 143 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 RPRMLQ8N4K4 120 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 RNF5Q99942 180 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 KAAG1Q9UBP8 84 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 MYMXA0A1B0GTQ4 84 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 BSPH1Q075Z2 132 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 VSIG2Q96IQ7 327 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 H3BMM0 161 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 ARMS2P0C7Q2 107 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 ZNF138P52744 262 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 LYPD2Q6UXB3 125 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 UBE2WQ96B02 151 aa4.93□□□□□ -1.62
TM9SF4-202ENST00000398022 MALRD1Q5VYJ5 2156 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 COX7A2LO14548 114 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 HBDP02042 147 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 ORMDL3Q8N138 153 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 RNASE6Q93091 150 aaKnown RBP4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 ZNF747Q9BV97 191 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 IGHV1-3A0A0C4DH29 117 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 GNLYP22749 145 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 NTN5Q8WTR8 489 aaPredicted RBP4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 LINC00588Q9Y4M8 146 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 COX7A1P24310 79 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 PDE6HQ13956 83 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 PHF5AQ7RTV0 110 aaKnown RBP4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 ZGRF1Q86YA3 2104 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 HIVEP1P15822 2718 aa4.92□□□□□ -1.62
TM9SF4-202ENST00000398022 FBN1P35555 2871 aaKnown RBP4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 PLA2G1BP04054 148 aaKnown RBP4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 EGR2P11161 476 aaPredicted RBP4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 Q8N8P6 123 aa4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 RITA1Q96K30 269 aa4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 H3BRN7 92 aa4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 CCKP06307 115 aa4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 IFI27L1Q96BM0 104 aa4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 BUB1B-PAK6H3BSN5 160 aa4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 I3L2K1 104 aa4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 RBM3P98179 157 aaKnown RBP4.91□□□□□ -1.62
TM9SF4-202ENST00000398022 A0A087WZ39 114 aa4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 IGLV2-11P01706 119 aa4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 CKS2P33552 79 aa4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 Q1RN00 199 aa4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 GFRALQ6UXV0 394 aa4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 D6R8Y8 96 aa4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 IGKV1-17P01599 117 aa4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 IFI27P40305 119 aaPredicted RBP4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 TWIST1Q15672 202 aa4.9□□□□□ -1.62
TM9SF4-202ENST00000398022 JMJD1CQ15652 2540 aa4.9□□□□□ -1.63
TM9SF4-202ENST00000398022 LOC100131303A0A0U1RQF7 123 aa4.9□□□□□ -1.63
TM9SF4-202ENST00000398022 LINC01548A6NM66 108 aa4.9□□□□□ -1.63
TM9SF4-202ENST00000398022 IGLV1-47P01700 117 aa4.9□□□□□ -1.63
TM9SF4-202ENST00000398022 UBE2BP63146 152 aa4.9□□□□□ -1.63
TM9SF4-202ENST00000398022 C22orf34Q6ZV56 151 aa4.9□□□□□ -1.63
TM9SF4-202ENST00000398022 SLC50A1Q9BRV3 221 aa4.9□□□□□ -1.63
TM9SF4-202ENST00000398022 FHL2Q14192 279 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 ZNF876PQ49A33 203 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 SFTA2Q6UW10 78 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 LYZL1Q6UWQ5 148 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 LINC00337Q8N6G1 96 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 C19orf73Q9NVV2 129 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 LINC00313P59037 77 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 MRGPRG-AS1Q2M3A8 158 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 ZNF491Q8N8L2 437 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 NKAPP1Q8N9T2 125 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 C11orf72Q8NBR9 251 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 WNK2Q9Y3S1 2297 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 COX6B1P14854 86 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 LINC00474Q9P2X8 69 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 KLLNB2CW77 178 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 K7EIM0 57 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 M0R3E3 92 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 SH2D1AO60880 128 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 NXPH4O95158 308 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 DEFB121Q5J5C9 76 aa4.89□□□□□ -1.63
TM9SF4-202ENST00000398022 S100A7L2Q5SY68 101 aa4.88□□□□□ -1.63
TM9SF4-202ENST00000398022 DPM3Q9P2X0 92 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms