RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
PDLIM2-205ENST00000397761 F5H768 121 aa13.62□□□□□ -0.23
PDLIM2-205ENST00000397761 PAX4O43316 350 aa13.62□□□□□ -0.23
PDLIM2-205ENST00000397761 LINC00173Q6ZV60 143 aa13.62□□□□□ -0.23
PDLIM2-205ENST00000397761 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
PDLIM2-205ENST00000397761 HSPB8Q9UJY1 196 aa13.62□□□□□ -0.23
PDLIM2-205ENST00000397761 LINC01549A6NIU2 74 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 NHLRC4P0CG21 123 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 GYPEP15421 78 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 C2orf66Q6UXQ4 117 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 Q6ZTC4 211 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 PHLDA1Q8WV24 401 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 DNAH9Q9NYC9 4486 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 IGHV3-38A0A0C4DH36 116 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 BTF3P20290 206 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 COTL1Q14019 142 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 C20orf203Q8NBC4 194 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 GTSF1LQ9H1H1 148 aa13.61□□□□□ -0.23
PDLIM2-205ENST00000397761 TRAV26-1A0A087WT03 109 aa13.6□□□□□ -0.23
PDLIM2-205ENST00000397761 C3orf79P0CE67 100 aa13.6□□□□□ -0.23
PDLIM2-205ENST00000397761 NANOS2P60321 138 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-205ENST00000397761 DEFB104AQ8WTQ1 72 aa13.6□□□□□ -0.23
PDLIM2-205ENST00000397761 CHCHD7Q9BUK0 85 aa13.6□□□□□ -0.23
PDLIM2-205ENST00000397761 CYSLTR1Q9Y271 337 aa13.6□□□□□ -0.23
PDLIM2-205ENST00000397761 H3BNG1 76 aa13.59□□□□□ -0.23
PDLIM2-205ENST00000397761 HTN3P15516 51 aa13.58□□□□□ -0.24
PDLIM2-205ENST00000397761 JOSD1Q15040 202 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-205ENST00000397761 NTM-AS1Q6ZSK4 140 aa13.58□□□□□ -0.24
PDLIM2-205ENST00000397761 ATP5LO75964 103 aa13.57□□□□□ -0.24
PDLIM2-205ENST00000397761 SPATA12Q7Z6I5 190 aa13.57□□□□□ -0.24
PDLIM2-205ENST00000397761 A0A0J9YY99 117 aa13.56□□□□□ -0.24
PDLIM2-205ENST00000397761 KRTDAPP60985 99 aa13.56□□□□□ -0.24
PDLIM2-205ENST00000397761 RPL39P62891 51 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-205ENST00000397761 TMEM97Q5BJF2 176 aa13.56□□□□□ -0.24
PDLIM2-205ENST00000397761 PYY3Q5JQD4 70 aa13.56□□□□□ -0.24
PDLIM2-205ENST00000397761 ATP6V0E2Q8NHE4 81 aa13.56□□□□□ -0.24
PDLIM2-205ENST00000397761 IFI27L1Q96BM0 104 aa13.56□□□□□ -0.24
PDLIM2-205ENST00000397761 IGIPA6NJ69 53 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 SYS1-DBNDD2H3BUS1 97 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 ERASQ7Z444 233 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 Q8N976 141 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 MAP1LC3CQ9BXW4 147 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 SMIM6P0DI80 62 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 MRPL23Q16540 153 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 SH2D6Q7Z4S9 175 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 SCGB3A1Q96QR1 104 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 TIMM17AQ99595 171 aa13.55□□□□□ -0.24
PDLIM2-205ENST00000397761 DEFB131BA0A096LNP1 70 aa13.54□□□□□ -0.24
PDLIM2-205ENST00000397761 PYGO1Q9Y3Y4 419 aa13.54□□□□□ -0.24
PDLIM2-205ENST00000397761 TRAV10A0A0B4J240 114 aa13.53□□□□□ -0.24
PDLIM2-205ENST00000397761 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-205ENST00000397761 PET117Q6UWS5 81 aa13.53□□□□□ -0.24
PDLIM2-205ENST00000397761 ICOSQ9Y6W8 199 aa13.53□□□□□ -0.24
PDLIM2-205ENST00000397761 A0A096LPF7 62 aa13.52□□□□□ -0.25
PDLIM2-205ENST00000397761 TRBV6-8A0A0A6YYG3 113 aa13.52□□□□□ -0.25
PDLIM2-205ENST00000397761 TMEM141Q96I45 108 aa13.52□□□□□ -0.25
PDLIM2-205ENST00000397761 NPSP0C0P6 89 aa13.51□□□□□ -0.25
PDLIM2-205ENST00000397761 TIMM21Q9BVV7 248 aa13.51□□□□□ -0.25
PDLIM2-205ENST00000397761 TRBV25-1A0A075B6N4 114 aa13.5□□□□□ -0.25
PDLIM2-205ENST00000397761 H7C423 109 aa13.5□□□□□ -0.25
PDLIM2-205ENST00000397761 LINC01545Q5VT33 79 aa13.5□□□□□ -0.25
PDLIM2-205ENST00000397761 TMEM243Q9BU79 118 aa13.5□□□□□ -0.25
PDLIM2-205ENST00000397761 SPANXA1Q9NS26 97 aa13.5□□□□□ -0.25
PDLIM2-205ENST00000397761 UBE2D4Q9Y2X8 147 aa13.5□□□□□ -0.25
PDLIM2-205ENST00000397761 MRPL52Q86TS9 123 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-205ENST00000397761 FAM104AQ969W3 186 aa13.49□□□□□ -0.25
PDLIM2-205ENST00000397761 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-205ENST00000397761 IGKV2-29A2NJV5 120 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-205ENST00000397761 SCGB1D1O95968 90 aa13.48□□□□□ -0.25
PDLIM2-205ENST00000397761 TIRAPP58753 221 aa13.48□□□□□ -0.25
PDLIM2-205ENST00000397761 TRAV12-1A0A0B4J245 112 aa13.48□□□□□ -0.25
PDLIM2-205ENST00000397761 LGALS9CQ6DKI2 356 aa13.48□□□□□ -0.25
PDLIM2-205ENST00000397761 BAALCQ8WXS3 180 aa13.48□□□□□ -0.25
PDLIM2-205ENST00000397761 CSDC2Q9Y534 153 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-205ENST00000397761 Q6ZN92 141 aa13.47□□□□□ -0.25
PDLIM2-205ENST00000397761 LINC00518Q8N0U6 118 aa13.47□□□□□ -0.25
PDLIM2-205ENST00000397761 IGLV4-3A0A075B6K6 122 aa13.46□□□□□ -0.25
PDLIM2-205ENST00000397761 PRSS1P07477 247 aa13.46□□□□□ -0.25
PDLIM2-205ENST00000397761 ODF1Q14990 250 aa13.46□□□□□ -0.25
PDLIM2-205ENST00000397761 C20orf202A1L168 122 aa13.45□□□□□ -0.26
PDLIM2-205ENST00000397761 FGF6P10767 208 aa13.45□□□□□ -0.26
PDLIM2-205ENST00000397761 MRPS36P82909 103 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-205ENST00000397761 SMAGPQ0VAQ4 97 aa13.45□□□□□ -0.26
PDLIM2-205ENST00000397761 H0Y8G0 127 aa13.44□□□□□ -0.26
PDLIM2-205ENST00000397761 PAPPA-AS1Q5QFB9 102 aa13.44□□□□□ -0.26
PDLIM2-205ENST00000397761 CDPF1Q6NVV7 123 aa13.44□□□□□ -0.26
PDLIM2-205ENST00000397761 OPRPNQ99935 248 aaPredicted RBP13.44□□□□□ -0.26
PDLIM2-205ENST00000397761 A0A087WX48 190 aa13.43□□□□□ -0.26
PDLIM2-205ENST00000397761 PMVKQ15126 192 aa13.43□□□□□ -0.26
PDLIM2-205ENST00000397761 CEMP1Q6PRD7 247 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-205ENST00000397761 TEX43Q6ZNM6 134 aa13.43□□□□□ -0.26
PDLIM2-205ENST00000397761 AMELXQ99217 191 aa13.43□□□□□ -0.26
PDLIM2-205ENST00000397761 C12orf57Q99622 126 aa13.43□□□□□ -0.26
PDLIM2-205ENST00000397761 ZNF25P17030 456 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-205ENST00000397761 LELP1Q5T871 98 aa13.42□□□□□ -0.26
PDLIM2-205ENST00000397761 LYPD5Q6UWN5 251 aa13.42□□□□□ -0.26
PDLIM2-205ENST00000397761 C15orf53Q8NAA6 179 aa13.42□□□□□ -0.26
PDLIM2-205ENST00000397761 PRSS29PA6NIE9 313 aa13.42□□□□□ -0.26
PDLIM2-205ENST00000397761 UBE2L6O14933 153 aa13.42□□□□□ -0.26
PDLIM2-205ENST00000397761 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms