RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 HSBP1O75506 76 aa16.39■□□□□ 0.21
TSPAN4-202ENST00000397396 SERF1AO75920 110 aa16.39■□□□□ 0.21
TSPAN4-202ENST00000397396 WWC2-AS2Q96NR7 200 aa16.39■□□□□ 0.21
TSPAN4-202ENST00000397396 COL7A1Q02388 2944 aa16.38■□□□□ 0.21
TSPAN4-202ENST00000397396 TSHBP01222 138 aa16.38■□□□□ 0.21
TSPAN4-202ENST00000397396 TCTAP57738 103 aa16.38■□□□□ 0.21
TSPAN4-202ENST00000397396 TIRAPP58753 221 aa16.38■□□□□ 0.21
TSPAN4-202ENST00000397396 TMA7Q9Y2S6 64 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-202ENST00000397396 LINC01549A6NIU2 74 aa16.37■□□□□ 0.21
TSPAN4-202ENST00000397396 URB1-AS1Q96HZ7 61 aa16.37■□□□□ 0.21
TSPAN4-202ENST00000397396 TRBV25-1A0A075B6N4 114 aa16.36■□□□□ 0.21
TSPAN4-202ENST00000397396 ESDP10768 282 aa16.36■□□□□ 0.21
TSPAN4-202ENST00000397396 AMTP48728 403 aa16.36■□□□□ 0.21
TSPAN4-202ENST00000397396 TMEM18Q96B42 140 aa16.36■□□□□ 0.21
TSPAN4-202ENST00000397396 IGHV1-24A0A0C4DH33 117 aa16.35■□□□□ 0.21
TSPAN4-202ENST00000397396 TRBV6-8A0A0A6YYG3 113 aa16.34■□□□□ 0.21
TSPAN4-202ENST00000397396 MUC7Q8TAX7 377 aa16.34■□□□□ 0.21
TSPAN4-202ENST00000397396 SMAGPQ0VAQ4 97 aa16.33■□□□□ 0.2
TSPAN4-202ENST00000397396 HBDP02042 147 aa16.32■□□□□ 0.2
TSPAN4-202ENST00000397396 LINC00310P59036 64 aa16.32■□□□□ 0.2
TSPAN4-202ENST00000397396 LELP1Q5T871 98 aa16.31■□□□□ 0.2
TSPAN4-202ENST00000397396 TMEM243Q9BU79 118 aa16.31■□□□□ 0.2
TSPAN4-202ENST00000397396 CYSLTR1Q9Y271 337 aa16.31■□□□□ 0.2
TSPAN4-202ENST00000397396 H7C423 109 aa16.3■□□□□ 0.2
TSPAN4-202ENST00000397396 BTF3P20290 206 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-202ENST00000397396 PKIAP61925 76 aa16.3■□□□□ 0.2
TSPAN4-202ENST00000397396 LYPD5Q6UWN5 251 aa16.3■□□□□ 0.2
TSPAN4-202ENST00000397396 NTM-AS1Q6ZSK4 140 aa16.3■□□□□ 0.2
TSPAN4-202ENST00000397396 C20orf203Q8NBC4 194 aa16.3■□□□□ 0.2
TSPAN4-202ENST00000397396 UBE2L6O14933 153 aa16.29■□□□□ 0.2
TSPAN4-202ENST00000397396 CHCHD7Q9BUK0 85 aa16.29■□□□□ 0.2
TSPAN4-202ENST00000397396 C2orf66Q6UXQ4 117 aa16.28■□□□□ 0.2
TSPAN4-202ENST00000397396 TRAV8-6A0A0B4J262 113 aa16.27■□□□□ 0.2
TSPAN4-202ENST00000397396 C5orf52A6NGY3 159 aa16.27■□□□□ 0.2
TSPAN4-202ENST00000397396 S100A2P29034 98 aa16.27■□□□□ 0.2
TSPAN4-202ENST00000397396 CCL18P55774 89 aa16.27■□□□□ 0.2
TSPAN4-202ENST00000397396 SNRPEP62304 92 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-202ENST00000397396 DEFB104AQ8WTQ1 72 aa16.27■□□□□ 0.2
TSPAN4-202ENST00000397396 TOMM6Q96B49 74 aa16.27■□□□□ 0.2
TSPAN4-202ENST00000397396 NUPR1O60356 82 aa16.26■□□□□ 0.19
TSPAN4-202ENST00000397396 PACRGQ96M98 296 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-202ENST00000397396 APLNQ9ULZ1 77 aa16.26■□□□□ 0.19
TSPAN4-202ENST00000397396 CHCHD5Q9BSY4 110 aa16.25■□□□□ 0.19
TSPAN4-202ENST00000397396 PMCHL1Q16048 86 aa16.24■□□□□ 0.19
TSPAN4-202ENST00000397396 HIST3H2BBQ8N257 126 aa16.24■□□□□ 0.19
TSPAN4-202ENST00000397396 FAM19A2Q8N3H0 131 aa16.24■□□□□ 0.19
TSPAN4-202ENST00000397396 A0A096LNJ9 63 aa16.23■□□□□ 0.19
TSPAN4-202ENST00000397396 ESRGQ1W209 222 aa16.23■□□□□ 0.19
TSPAN4-202ENST00000397396 ZFAND6Q6FIF0 208 aa16.23■□□□□ 0.19
TSPAN4-202ENST00000397396 SPANXA1Q9NS26 97 aa16.23■□□□□ 0.19
TSPAN4-202ENST00000397396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 IGKV2-29A2NJV5 120 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 C3orf84H3BNL1 204 aa16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 LEPROTL1O95214 131 aa16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 NPSP0C0P6 89 aa16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 ZNF25P17030 456 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 PDZD11Q5EBL8 140 aa16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 TIMM21Q9BVV7 248 aa16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 HSPB8Q9UJY1 196 aa16.22■□□□□ 0.19
TSPAN4-202ENST00000397396 ATP5LO75964 103 aa16.21■□□□□ 0.19
TSPAN4-202ENST00000397396 AMMECR1LQ6DCA0 310 aa16.21■□□□□ 0.19
TSPAN4-202ENST00000397396 MRPL52Q86TS9 123 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-202ENST00000397396 MRPS16Q9Y3D3 137 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-202ENST00000397396 PYGO1Q9Y3Y4 419 aa16.21■□□□□ 0.19
TSPAN4-202ENST00000397396 RPL39P62891 51 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-202ENST00000397396 ERASQ7Z444 233 aa16.2■□□□□ 0.18
TSPAN4-202ENST00000397396 TMEM101Q96IK0 257 aa16.2■□□□□ 0.18
TSPAN4-202ENST00000397396 SCGB3A1Q96QR1 104 aa16.2■□□□□ 0.18
TSPAN4-202ENST00000397396 TIMM17AQ99595 171 aa16.2■□□□□ 0.18
TSPAN4-202ENST00000397396 FGF6P10767 208 aa16.19■□□□□ 0.18
TSPAN4-202ENST00000397396 PAPPA-AS1Q5QFB9 102 aa16.19■□□□□ 0.18
TSPAN4-202ENST00000397396 DGAT2L7PQ6IED9 249 aa16.19■□□□□ 0.18
TSPAN4-202ENST00000397396 TMEM141Q96I45 108 aa16.19■□□□□ 0.18
TSPAN4-202ENST00000397396 UBE2D4Q9Y2X8 147 aa16.19■□□□□ 0.18
TSPAN4-202ENST00000397396 CSDC2Q9Y534 153 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-202ENST00000397396 GAGE6Q13070 117 aa16.19■□□□□ 0.18
TSPAN4-202ENST00000397396 TMEM262E9PQX1 116 aa16.18■□□□□ 0.18
TSPAN4-202ENST00000397396 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-202ENST00000397396 UPK3BQ9BT76 320 aa16.18■□□□□ 0.18
TSPAN4-202ENST00000397396 A0A087WX48 190 aa16.17■□□□□ 0.18
TSPAN4-202ENST00000397396 UBE2DNLQ8IWF7 75 aa16.17■□□□□ 0.18
TSPAN4-202ENST00000397396 OR5A1Q8NGJ0 315 aa16.17■□□□□ 0.18
TSPAN4-202ENST00000397396 HIST1H2BLQ99880 126 aa16.17■□□□□ 0.18
TSPAN4-202ENST00000397396 LINC00588Q9Y4M8 146 aa16.17■□□□□ 0.18
TSPAN4-202ENST00000397396 A0A1B0GUV1 79 aa16.16■□□□□ 0.18
TSPAN4-202ENST00000397396 Q6ZN92 141 aa16.16■□□□□ 0.18
TSPAN4-202ENST00000397396 IGIPA6NJ69 53 aa16.15■□□□□ 0.18
TSPAN4-202ENST00000397396 FABP4P15090 132 aa16.15■□□□□ 0.18
TSPAN4-202ENST00000397396 MRPS36P82909 103 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-202ENST00000397396 IFI27L1Q96BM0 104 aa16.15■□□□□ 0.18
TSPAN4-202ENST00000397396 DNAH7Q8WXX0 4024 aa16.13■□□□□ 0.17
TSPAN4-202ENST00000397396 CASC10Q5T4H9 136 aa16.13■□□□□ 0.17
TSPAN4-202ENST00000397396 RBX1P62877 108 aa16.12■□□□□ 0.17
TSPAN4-202ENST00000397396 WFDC10BQ8IUB3 73 aa16.12■□□□□ 0.17
TSPAN4-202ENST00000397396 MAP1LC3CQ9BXW4 147 aa16.12■□□□□ 0.17
TSPAN4-202ENST00000397396 SIVA1O15304 175 aa16.11■□□□□ 0.17
TSPAN4-202ENST00000397396 MPV17L2Q567V2 206 aa16.11■□□□□ 0.17
TSPAN4-202ENST00000397396 LINC01556Q5JQF7 62 aa16.11■□□□□ 0.17
TSPAN4-202ENST00000397396 IGLV4-3A0A075B6K6 122 aa16.1■□□□□ 0.17
TSPAN4-202ENST00000397396 DYNC2H1Q8NCM8 4307 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms