RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
SEC13-208ENST00000397109 K7EQD1 137 aa10.02□□□□□ -0.81
SEC13-208ENST00000397109 RS1O15537 224 aa10.02□□□□□ -0.81
SEC13-208ENST00000397109 TNFRSF6BO95407 300 aa10.02□□□□□ -0.81
SEC13-208ENST00000397109 GYPEP15421 78 aa10.02□□□□□ -0.81
SEC13-208ENST00000397109 BTF3P20290 206 aaKnown RBP10.02□□□□□ -0.81
SEC13-208ENST00000397109 PKIAP61925 76 aa10.02□□□□□ -0.81
SEC13-208ENST00000397109 PMCHL1Q16048 86 aa10.02□□□□□ -0.81
SEC13-208ENST00000397109 SH2D6Q7Z4S9 175 aa10.02□□□□□ -0.81
SEC13-208ENST00000397109 A0A1B0GVY2 172 aa10.01□□□□□ -0.81
SEC13-208ENST00000397109 TSTD3H0UI37 97 aa10.01□□□□□ -0.81
SEC13-208ENST00000397109 NPYP01303 97 aa10.01□□□□□ -0.81
SEC13-208ENST00000397109 SMIM17P0DL12 118 aa10.01□□□□□ -0.81
SEC13-208ENST00000397109 GATA1P15976 413 aaPredicted RBP10.01□□□□□ -0.81
SEC13-208ENST00000397109 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
SEC13-208ENST00000397109 CFAP126Q5VTH2 177 aa10.01□□□□□ -0.81
SEC13-208ENST00000397109 LYPD5Q6UWN5 251 aa10.01□□□□□ -0.81
SEC13-208ENST00000397109 C20orf78Q9BR46 151 aa10.01□□□□□ -0.81
SEC13-208ENST00000397109 FAT2Q9NYQ8 4349 aa10.01□□□□□ -0.81
SEC13-208ENST00000397109 SIVA1O15304 175 aa10□□□□□ -0.81
SEC13-208ENST00000397109 C3orf79P0CE67 100 aa10□□□□□ -0.81
SEC13-208ENST00000397109 KRTDAPP60985 99 aa10□□□□□ -0.81
SEC13-208ENST00000397109 TEX43Q6ZNM6 134 aa10□□□□□ -0.81
SEC13-208ENST00000397109 TMEM70Q9BUB7 260 aa10□□□□□ -0.81
SEC13-208ENST00000397109 Q8N8P6 123 aa9.99□□□□□ -0.81
SEC13-208ENST00000397109 PRADC1Q9BSG0 188 aa9.99□□□□□ -0.81
SEC13-208ENST00000397109 MAP1LC3CQ9BXW4 147 aa9.99□□□□□ -0.81
SEC13-208ENST00000397109 TRBV6-4A0A1B0GX49 114 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 A8MWV9 139 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
SEC13-208ENST00000397109 PET117Q6UWS5 81 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 SPATA12Q7Z6I5 190 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 NRACQ8N912 160 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 C20orf202A1L168 122 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 PCP4L1A6NKN8 68 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 HBDP02042 147 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 RHOHQ15669 191 aa9.98□□□□□ -0.81
SEC13-208ENST00000397109 LOC389332A0A1B0GUA5 103 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 SMKR1H3BMG3 65 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 G0S2P27469 103 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 TIRAPP58753 221 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 CDPF1Q6NVV7 123 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 ZFP2Q6ZN57 461 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 C14orf178Q8N769 122 aaPredicted RBP9.97□□□□□ -0.81
SEC13-208ENST00000397109 SLC25A29Q8N8R3 303 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 KRTAP1-5Q9BYS1 174 aa9.97□□□□□ -0.81
SEC13-208ENST00000397109 TRAV9-2A0A087WT02 112 aa9.96□□□□□ -0.82
SEC13-208ENST00000397109 IGHV3-73A0A0B4J1V6 119 aa9.96□□□□□ -0.82
SEC13-208ENST00000397109 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
SEC13-208ENST00000397109 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
SEC13-208ENST00000397109 NCR2O95944 276 aa9.96□□□□□ -0.82
SEC13-208ENST00000397109 FCER1GP30273 86 aa9.96□□□□□ -0.82
SEC13-208ENST00000397109 LINC00315P59091 139 aa9.96□□□□□ -0.82
SEC13-208ENST00000397109 Q8N976 141 aa9.96□□□□□ -0.82
SEC13-208ENST00000397109 K7EP13 123 aa9.95□□□□□ -0.82
SEC13-208ENST00000397109 RHODO00212 210 aa9.95□□□□□ -0.82
SEC13-208ENST00000397109 CRYGDP07320 174 aa9.95□□□□□ -0.82
SEC13-208ENST00000397109 SUMO2P61956 95 aaKnown RBP9.95□□□□□ -0.82
SEC13-208ENST00000397109 TNP2Q05952 138 aa9.95□□□□□ -0.82
SEC13-208ENST00000397109 JPT2Q9H910 190 aa9.95□□□□□ -0.82
SEC13-208ENST00000397109 LAGE3Q14657 143 aa9.94□□□□□ -0.82
SEC13-208ENST00000397109 ORMDL2Q53FV1 153 aa9.94□□□□□ -0.82
SEC13-208ENST00000397109 VAMP8Q9BV40 100 aa9.94□□□□□ -0.82
SEC13-208ENST00000397109 A0A096LNJ9 63 aa9.93□□□□□ -0.82
SEC13-208ENST00000397109 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
SEC13-208ENST00000397109 SMIM2Q9BVW6 85 aa9.93□□□□□ -0.82
SEC13-208ENST00000397109 TCAPO15273 167 aa9.92□□□□□ -0.82
SEC13-208ENST00000397109 PKHD1P08F94 4074 aa9.92□□□□□ -0.82
SEC13-208ENST00000397109 H7C1H1 209 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 GAS8-AS1O95177 125 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 MGPP08493 103 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 DNAH10OSP0CZ25 163 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 LINC01545Q5VT33 79 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 WFDC10BQ8IUB3 73 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 ATP6V0E2Q8NHE4 81 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 PKD1P98161 4303 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 A0A087WWL8 130 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 TRAV8-6A0A0B4J262 113 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 TRAV26-2A0A0B4J265 109 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 ATP5LO75964 103 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 NFE4Q86UQ8 179 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 ST20Q9HBF5 79 aa9.91□□□□□ -0.82
SEC13-208ENST00000397109 VCYO14598 125 aa9.9□□□□□ -0.83
SEC13-208ENST00000397109 DDTP30046 118 aa9.9□□□□□ -0.83
SEC13-208ENST00000397109 POLR2KP53803 58 aaKnown RBP9.9□□□□□ -0.83
SEC13-208ENST00000397109 FAM74A4Q5TZK3 123 aa9.9□□□□□ -0.83
SEC13-208ENST00000397109 Q6ZSN1 163 aa9.9□□□□□ -0.83
SEC13-208ENST00000397109 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.83
SEC13-208ENST00000397109 IFI27L1Q96BM0 104 aa9.9□□□□□ -0.83
SEC13-208ENST00000397109 GTSF1LQ9H1H1 148 aa9.9□□□□□ -0.83
SEC13-208ENST00000397109 IGHV3-38A0A0C4DH36 116 aa9.89□□□□□ -0.83
SEC13-208ENST00000397109 F5H697 171 aa9.89□□□□□ -0.83
SEC13-208ENST00000397109 LELP1Q5T871 98 aa9.89□□□□□ -0.83
SEC13-208ENST00000397109 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
SEC13-208ENST00000397109 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
SEC13-208ENST00000397109 M0QY20 66 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms