RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 TRAV26-1A0A087WT03 109 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 GAGE12JA6NER3 117 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 F5H768 121 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 DEFA6Q01524 100 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 GAGE1Q13065 139 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 GAGE4Q13068 117 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 GAGE5Q13069 117 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 GAGE13Q4V321 117 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 SH2D6Q7Z4S9 175 aa9.52□□□□□ -0.88
MCF2L-209ENST00000397036 ATP5LO75964 103 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 GYPEP15421 78 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 C20orf203Q8NBC4 194 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 CYSLTR1Q9Y271 337 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 LOC100131303A0A0U1RQF7 123 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 NPSP0C0P6 89 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 BTF3P20290 206 aaKnown RBP9.51□□□□□ -0.89
MCF2L-209ENST00000397036 AKR1D1P51857 326 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 MRPL23Q16540 153 aaKnown RBP9.51□□□□□ -0.89
MCF2L-209ENST00000397036 C2orf66Q6UXQ4 117 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 Q6ZTC4 211 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 SPATA12Q7Z6I5 190 aa9.51□□□□□ -0.89
MCF2L-209ENST00000397036 ERASQ7Z444 233 aa9.5□□□□□ -0.89
MCF2L-209ENST00000397036 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
MCF2L-209ENST00000397036 CHCHD7Q9BUK0 85 aa9.5□□□□□ -0.89
MCF2L-209ENST00000397036 STAB2Q8WWQ8 2551 aa9.49□□□□□ -0.89
MCF2L-209ENST00000397036 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
MCF2L-209ENST00000397036 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
MCF2L-209ENST00000397036 JOSD1Q15040 202 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-209ENST00000397036 PHLDA1Q8WV24 401 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-209ENST00000397036 IFI27L1Q96BM0 104 aa9.49□□□□□ -0.89
MCF2L-209ENST00000397036 TIMM17AQ99595 171 aa9.49□□□□□ -0.89
MCF2L-209ENST00000397036 MAP1LC3CQ9BXW4 147 aa9.49□□□□□ -0.89
MCF2L-209ENST00000397036 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
MCF2L-209ENST00000397036 IGIPA6NJ69 53 aa9.48□□□□□ -0.89
MCF2L-209ENST00000397036 H7C423 109 aa9.48□□□□□ -0.89
MCF2L-209ENST00000397036 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
MCF2L-209ENST00000397036 NTM-AS1Q6ZSK4 140 aa9.48□□□□□ -0.89
MCF2L-209ENST00000397036 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
MCF2L-209ENST00000397036 TMEM141Q96I45 108 aa9.48□□□□□ -0.89
MCF2L-209ENST00000397036 SCGB3A1Q96QR1 104 aa9.48□□□□□ -0.89
MCF2L-209ENST00000397036 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
MCF2L-209ENST00000397036 DEFB131BA0A096LNP1 70 aa9.47□□□□□ -0.89
MCF2L-209ENST00000397036 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
MCF2L-209ENST00000397036 IGHV3-38A0A0C4DH36 116 aa9.47□□□□□ -0.89
MCF2L-209ENST00000397036 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-209ENST00000397036 SYS1-DBNDD2H3BUS1 97 aa9.47□□□□□ -0.89
MCF2L-209ENST00000397036 HTN3P15516 51 aa9.47□□□□□ -0.89
MCF2L-209ENST00000397036 TIRAPP58753 221 aa9.47□□□□□ -0.89
MCF2L-209ENST00000397036 ICOSQ9Y6W8 199 aa9.47□□□□□ -0.89
MCF2L-209ENST00000397036 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.89
MCF2L-209ENST00000397036 A0A0J9YY99 117 aa9.46□□□□□ -0.89
MCF2L-209ENST00000397036 SMAGPQ0VAQ4 97 aa9.46□□□□□ -0.89
MCF2L-209ENST00000397036 SPANXA1Q9NS26 97 aa9.46□□□□□ -0.89
MCF2L-209ENST00000397036 CSDC2Q9Y534 153 aaKnown RBP9.46□□□□□ -0.89
MCF2L-209ENST00000397036 TRBV25-1A0A075B6N4 114 aa9.46□□□□□ -0.9
MCF2L-209ENST00000397036 SMIM6P0DI80 62 aa9.46□□□□□ -0.9
MCF2L-209ENST00000397036 KRTDAPP60985 99 aa9.46□□□□□ -0.9
MCF2L-209ENST00000397036 PYY3Q5JQD4 70 aa9.46□□□□□ -0.9
MCF2L-209ENST00000397036 MRPL52Q86TS9 123 aaKnown RBP9.46□□□□□ -0.9
MCF2L-209ENST00000397036 A0A096LPF7 62 aa9.45□□□□□ -0.9
MCF2L-209ENST00000397036 RPL39P62891 51 aaKnown RBP9.45□□□□□ -0.9
MCF2L-209ENST00000397036 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
MCF2L-209ENST00000397036 TMEM243Q9BU79 118 aa9.45□□□□□ -0.9
MCF2L-209ENST00000397036 MEGF8Q7Z7M0 2845 aa9.44□□□□□ -0.9
MCF2L-209ENST00000397036 TRAV12-1A0A0B4J245 112 aa9.44□□□□□ -0.9
MCF2L-209ENST00000397036 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
MCF2L-209ENST00000397036 LGALS9CQ6DKI2 356 aa9.44□□□□□ -0.9
MCF2L-209ENST00000397036 Q8N976 141 aa9.44□□□□□ -0.9
MCF2L-209ENST00000397036 DEFB104AQ8WTQ1 72 aa9.44□□□□□ -0.9
MCF2L-209ENST00000397036 PRKDCP78527 4128 aaKnown RBP9.43□□□□□ -0.9
MCF2L-209ENST00000397036 C20orf202A1L168 122 aa9.43□□□□□ -0.9
MCF2L-209ENST00000397036 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
MCF2L-209ENST00000397036 Q6ZN92 141 aa9.43□□□□□ -0.9
MCF2L-209ENST00000397036 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
MCF2L-209ENST00000397036 UBE2D4Q9Y2X8 147 aa9.43□□□□□ -0.9
MCF2L-209ENST00000397036 PRSS1P07477 247 aa9.42□□□□□ -0.9
MCF2L-209ENST00000397036 SCGB1D1O95968 90 aa9.41□□□□□ -0.9
MCF2L-209ENST00000397036 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-209ENST00000397036 LELP1Q5T871 98 aa9.41□□□□□ -0.9
MCF2L-209ENST00000397036 IGLV4-3A0A075B6K6 122 aa9.41□□□□□ -0.9
MCF2L-209ENST00000397036 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-209ENST00000397036 A0A087WX48 190 aa9.41□□□□□ -0.9
MCF2L-209ENST00000397036 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-209ENST00000397036 FGF6P10767 208 aa9.41□□□□□ -0.9
MCF2L-209ENST00000397036 PKIAP61925 76 aa9.41□□□□□ -0.9
MCF2L-209ENST00000397036 LINC00518Q8N0U6 118 aa9.41□□□□□ -0.9
MCF2L-209ENST00000397036 BAALCQ8WXS3 180 aa9.41□□□□□ -0.9
MCF2L-209ENST00000397036 A0A1B0GUV1 79 aa9.4□□□□□ -0.91
MCF2L-209ENST00000397036 UBE2L6O14933 153 aa9.4□□□□□ -0.91
MCF2L-209ENST00000397036 ODF1Q14990 250 aa9.4□□□□□ -0.91
MCF2L-209ENST00000397036 PMVKQ15126 192 aa9.4□□□□□ -0.91
MCF2L-209ENST00000397036 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.91
MCF2L-209ENST00000397036 FAM104AQ969W3 186 aa9.4□□□□□ -0.91
MCF2L-209ENST00000397036 AMELXQ99217 191 aa9.4□□□□□ -0.91
MCF2L-209ENST00000397036 PRSS29PA6NIE9 313 aa9.39□□□□□ -0.91
MCF2L-209ENST00000397036 VCX2Q9H322 139 aa9.39□□□□□ -0.91
MCF2L-209ENST00000397036 CST9LQ9H4G1 147 aa9.39□□□□□ -0.91
MCF2L-209ENST00000397036 COL7A1Q02388 2944 aa9.38□□□□□ -0.91
MCF2L-209ENST00000397036 DGAT2L7PQ6IED9 249 aa9.38□□□□□ -0.91
MCF2L-209ENST00000397036 TEX43Q6ZNM6 134 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms