RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 PDZD11Q5EBL8 140 aa9.76□□□□□ -0.85
GAPDH-203ENST00000396858 COA6Q5JTJ3 125 aaKnown RBP9.76□□□□□ -0.85
GAPDH-203ENST00000396858 CEMP1Q6PRD7 247 aaPredicted RBP9.76□□□□□ -0.85
GAPDH-203ENST00000396858 C15orf53Q8NAA6 179 aa9.76□□□□□ -0.85
GAPDH-203ENST00000396858 PLECQ15149 4684 aaKnown RBP9.76□□□□□ -0.85
GAPDH-203ENST00000396858 LINC01546A6NGU7 62 aa9.75□□□□□ -0.85
GAPDH-203ENST00000396858 HSBP1O75506 76 aa9.75□□□□□ -0.85
GAPDH-203ENST00000396858 S100A6P06703 90 aa9.75□□□□□ -0.85
GAPDH-203ENST00000396858 LINC00614P0C842 121 aa9.75□□□□□ -0.85
GAPDH-203ENST00000396858 AMTP48728 403 aa9.75□□□□□ -0.85
GAPDH-203ENST00000396858 NTM-AS1Q6ZSK4 140 aa9.75□□□□□ -0.85
GAPDH-203ENST00000396858 CHCHD1Q96BP2 118 aaKnown RBP9.75□□□□□ -0.85
GAPDH-203ENST00000396858 TGP01266 2768 aa9.75□□□□□ -0.85
GAPDH-203ENST00000396858 IGHV1-24A0A0C4DH33 117 aa9.74□□□□□ -0.85
GAPDH-203ENST00000396858 LAGE3Q14657 143 aa9.74□□□□□ -0.85
GAPDH-203ENST00000396858 WWC2-AS2Q96NR7 200 aa9.74□□□□□ -0.85
GAPDH-203ENST00000396858 CHCHD7Q9BUK0 85 aa9.74□□□□□ -0.85
GAPDH-203ENST00000396858 GTSF1LQ9H1H1 148 aa9.74□□□□□ -0.85
GAPDH-203ENST00000396858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.73□□□□□ -0.85
GAPDH-203ENST00000396858 A0A096LNJ9 63 aa9.73□□□□□ -0.85
GAPDH-203ENST00000396858 IGKV2-29A2NJV5 120 aaPredicted RBP9.73□□□□□ -0.85
GAPDH-203ENST00000396858 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
GAPDH-203ENST00000396858 ORMDL2Q53FV1 153 aa9.73□□□□□ -0.85
GAPDH-203ENST00000396858 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
GAPDH-203ENST00000396858 FAM19A2Q8N3H0 131 aa9.73□□□□□ -0.85
GAPDH-203ENST00000396858 MUC7Q8TAX7 377 aa9.73□□□□□ -0.85
GAPDH-203ENST00000396858 TRBV25-1A0A075B6N4 114 aa9.72□□□□□ -0.85
GAPDH-203ENST00000396858 TRBV6-8A0A0A6YYG3 113 aa9.72□□□□□ -0.85
GAPDH-203ENST00000396858 ESDP10768 282 aa9.72□□□□□ -0.85
GAPDH-203ENST00000396858 SNRPEP62304 92 aaKnown RBP9.72□□□□□ -0.85
GAPDH-203ENST00000396858 RPL39P62891 51 aaKnown RBP9.72□□□□□ -0.85
GAPDH-203ENST00000396858 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
GAPDH-203ENST00000396858 K7EMI3 77 aa9.71□□□□□ -0.86
GAPDH-203ENST00000396858 HBDP02042 147 aa9.71□□□□□ -0.86
GAPDH-203ENST00000396858 TMEM97Q5BJF2 176 aa9.71□□□□□ -0.86
GAPDH-203ENST00000396858 HIST3H2BBQ8N257 126 aa9.71□□□□□ -0.86
GAPDH-203ENST00000396858 TMEM243Q9BU79 118 aa9.71□□□□□ -0.86
GAPDH-203ENST00000396858 CSMD3Q7Z407 3707 aa9.7□□□□□ -0.86
GAPDH-203ENST00000396858 LYPD5Q6UWN5 251 aa9.7□□□□□ -0.86
GAPDH-203ENST00000396858 C2orf66Q6UXQ4 117 aa9.7□□□□□ -0.86
GAPDH-203ENST00000396858 C20orf203Q8NBC4 194 aa9.7□□□□□ -0.86
GAPDH-203ENST00000396858 APLNQ9ULZ1 77 aa9.7□□□□□ -0.86
GAPDH-203ENST00000396858 C5orf52A6NGY3 159 aa9.69□□□□□ -0.86
GAPDH-203ENST00000396858 TIRAPP58753 221 aa9.69□□□□□ -0.86
GAPDH-203ENST00000396858 GAGE6Q13070 117 aa9.69□□□□□ -0.86
GAPDH-203ENST00000396858 ESRGQ1W209 222 aa9.69□□□□□ -0.86
GAPDH-203ENST00000396858 LELP1Q5T871 98 aa9.69□□□□□ -0.86
GAPDH-203ENST00000396858 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
GAPDH-203ENST00000396858 CYSLTR1Q9Y271 337 aa9.69□□□□□ -0.86
GAPDH-203ENST00000396858 UBE2L6O14933 153 aa9.68□□□□□ -0.86
GAPDH-203ENST00000396858 TOMM6Q96B49 74 aa9.68□□□□□ -0.86
GAPDH-203ENST00000396858 IFITM10A6NMD0 228 aa9.67□□□□□ -0.86
GAPDH-203ENST00000396858 S100A2P29034 98 aa9.67□□□□□ -0.86
GAPDH-203ENST00000396858 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
GAPDH-203ENST00000396858 WFDC10BQ8IUB3 73 aa9.67□□□□□ -0.86
GAPDH-203ENST00000396858 Q8N3U1 123 aa9.67□□□□□ -0.86
GAPDH-203ENST00000396858 FGF6P10767 208 aa9.66□□□□□ -0.86
GAPDH-203ENST00000396858 FABP4P15090 132 aa9.66□□□□□ -0.86
GAPDH-203ENST00000396858 TMEM18Q96B42 140 aa9.66□□□□□ -0.86
GAPDH-203ENST00000396858 HIST1H2BLQ99880 126 aa9.66□□□□□ -0.86
GAPDH-203ENST00000396858 UBE2D4Q9Y2X8 147 aa9.66□□□□□ -0.86
GAPDH-203ENST00000396858 MRPS16Q9Y3D3 137 aaKnown RBP9.66□□□□□ -0.86
GAPDH-203ENST00000396858 LINC00588Q9Y4M8 146 aa9.66□□□□□ -0.86
GAPDH-203ENST00000396858 MPV17L2Q567V2 206 aa9.65□□□□□ -0.86
GAPDH-203ENST00000396858 AMMECR1LQ6DCA0 310 aa9.65□□□□□ -0.86
GAPDH-203ENST00000396858 Q6ZUT4 128 aa9.65□□□□□ -0.86
GAPDH-203ENST00000396858 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
GAPDH-203ENST00000396858 TRAV8-6A0A0B4J262 113 aa9.64□□□□□ -0.87
GAPDH-203ENST00000396858 LEPROTL1O95214 131 aa9.64□□□□□ -0.87
GAPDH-203ENST00000396858 CCL18P55774 89 aa9.64□□□□□ -0.87
GAPDH-203ENST00000396858 UBE2DNLQ8IWF7 75 aa9.64□□□□□ -0.87
GAPDH-203ENST00000396858 SCGB3A1Q96QR1 104 aa9.64□□□□□ -0.87
GAPDH-203ENST00000396858 SPANXA1Q9NS26 97 aa9.64□□□□□ -0.87
GAPDH-203ENST00000396858 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
GAPDH-203ENST00000396858 G0S2P27469 103 aa9.63□□□□□ -0.87
GAPDH-203ENST00000396858 TCTAP57738 103 aa9.63□□□□□ -0.87
GAPDH-203ENST00000396858 RNASE13Q5GAN3 156 aaKnown RBP9.63□□□□□ -0.87
GAPDH-203ENST00000396858 MRPL52Q86TS9 123 aaKnown RBP9.63□□□□□ -0.87
GAPDH-203ENST00000396858 Q8N976 141 aa9.63□□□□□ -0.87
GAPDH-203ENST00000396858 OPRPNQ99935 248 aaPredicted RBP9.63□□□□□ -0.87
GAPDH-203ENST00000396858 IGLV4-60A0A075B6I1 120 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 IGIPA6NJ69 53 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 H7C423 109 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 RBX1P62877 108 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 CASC10Q5T4H9 136 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 OR5A1Q8NGJ0 315 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 TIMM17AQ99595 171 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 VPS13DQ5THJ4 4388 aa9.62□□□□□ -0.87
GAPDH-203ENST00000396858 A0A087WX48 190 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 IGHV3-30P01768 117 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 IGHV3-33P01772 117 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 IGHV3-30-5P0DP03 117 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 ZC2HC1BQ5TFG8 222 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 ERASQ7Z444 233 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 FAM104AQ969W3 186 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 IFI27L1Q96BM0 104 aa9.61□□□□□ -0.87
GAPDH-203ENST00000396858 PACRGQ96M98 296 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms