RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 GATD1Q8NB37 220 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 C20orf203Q8NBC4 194 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 SMIM12Q96EX1 92 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 PGLYRP4Q96LB8 373 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 DPH3P1Q9H4G8 78 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 IGHV1-24A0A0C4DH33 117 aa7.54□□□□□ -1.2
HLA-DQA1-203ENST00000395363 PRSS1P07477 247 aa7.54□□□□□ -1.2
HLA-DQA1-203ENST00000395363 ELOBQ15370 118 aa7.54□□□□□ -1.2
HLA-DQA1-203ENST00000395363 IQCJQ1A5X6 159 aa7.54□□□□□ -1.2
HLA-DQA1-203ENST00000395363 IGKV3OR2-268A0A0C4DH90 116 aa7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 XKRY2A2RUG3 117 aa7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 F2Z2F3 143 aa7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 PANO1I0J062 215 aa7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 GATCO43716 136 aaKnown RBP7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 TRGC1P0CF51 173 aa7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 Q0VG73 95 aa7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 TMEM243Q9BU79 118 aa7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 COX11Q9Y6N1 276 aa7.53□□□□□ -1.2
HLA-DQA1-203ENST00000395363 H7C1H1 209 aa7.52□□□□□ -1.21
HLA-DQA1-203ENST00000395363 REG3AQ06141 175 aa7.52□□□□□ -1.21
HLA-DQA1-203ENST00000395363 C21orf62-AS1Q17RA5 79 aa7.52□□□□□ -1.21
HLA-DQA1-203ENST00000395363 LYPD6BQ8NI32 183 aa7.52□□□□□ -1.21
HLA-DQA1-203ENST00000395363 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
HLA-DQA1-203ENST00000395363 NIT2Q9NQR4 276 aa7.52□□□□□ -1.21
HLA-DQA1-203ENST00000395363 PRR34Q9NV39 138 aa7.52□□□□□ -1.21
HLA-DQA1-203ENST00000395363 FAT3Q8TDW7 4589 aa7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 IGKV2-29A2NJV5 120 aaPredicted RBP7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 TAGLN2P37802 199 aaKnown RBP7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 AMTP48728 403 aa7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 BLOC1S1P78537 153 aa7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 MIAQ16674 131 aa7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 CIRBP-AS1Q8TBR5 109 aa7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 SMIM7Q9BQ49 75 aa7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 EIF5A2Q9GZV4 153 aaKnown RBP7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 BIN3Q9NQY0 253 aa7.51□□□□□ -1.21
HLA-DQA1-203ENST00000395363 C9JQL5 133 aa7.5□□□□□ -1.21
HLA-DQA1-203ENST00000395363 TMEM250H0YL14 139 aa7.5□□□□□ -1.21
HLA-DQA1-203ENST00000395363 SRP19P09132 144 aaKnown RBP7.5□□□□□ -1.21
HLA-DQA1-203ENST00000395363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
HLA-DQA1-203ENST00000395363 SMKR1H3BMG3 65 aa7.49□□□□□ -1.21
HLA-DQA1-203ENST00000395363 KRTAP10-4P60372 401 aaPredicted RBP7.49□□□□□ -1.21
HLA-DQA1-203ENST00000395363 SRSF3P84103 164 aaKnown RBP7.49□□□□□ -1.21
HLA-DQA1-203ENST00000395363 COTL1Q14019 142 aa7.49□□□□□ -1.21
HLA-DQA1-203ENST00000395363 TMEM97Q5BJF2 176 aa7.49□□□□□ -1.21
HLA-DQA1-203ENST00000395363 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
HLA-DQA1-203ENST00000395363 FAM210AQ96ND0 272 aa7.49□□□□□ -1.21
HLA-DQA1-203ENST00000395363 CHAC1Q9BUX1 264 aa7.49□□□□□ -1.21
HLA-DQA1-203ENST00000395363 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
HLA-DQA1-203ENST00000395363 NCR2O95944 276 aa7.48□□□□□ -1.21
HLA-DQA1-203ENST00000395363 SLPIP03973 132 aa7.48□□□□□ -1.21
HLA-DQA1-203ENST00000395363 RPS10P46783 165 aaKnown RBP7.48□□□□□ -1.21
HLA-DQA1-203ENST00000395363 FAM231DQ6ZW35 169 aa7.48□□□□□ -1.21
HLA-DQA1-203ENST00000395363 hDV102S1A0JD36 115 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 SDHAF1A6NFY7 115 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 ZNF727A8MUV8 499 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 HIGD1CA8MV81 97 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 UBE2L6O14933 153 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 CHTF8P0CG12 524 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 PKIAP61925 76 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 WDR73Q6P4I2 378 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 TMEM242Q9NWH2 141 aa7.47□□□□□ -1.21
HLA-DQA1-203ENST00000395363 FAM231BA6NCW3 169 aa7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 GAGE12HA6NDE8 117 aa7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 A8MWL6 223 aa7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 HNRNPA3P51991 378 aaKnown RBP7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 HIGD2BQ4VC39 106 aa7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 C14orf177Q52M58 125 aa7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 RNASEKQ6P5S7 137 aaKnown RBP7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 AMN1Q8IY45 258 aa7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 C15orf56Q8N910 161 aa7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 RNF185Q96GF1 192 aa7.46□□□□□ -1.22
HLA-DQA1-203ENST00000395363 A0A1B0GUV1 79 aa7.45□□□□□ -1.22
HLA-DQA1-203ENST00000395363 APCSP02743 223 aa7.45□□□□□ -1.22
HLA-DQA1-203ENST00000395363 V9GYV3 84 aa7.45□□□□□ -1.22
HLA-DQA1-203ENST00000395363 TSHBP01222 138 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 FGF6P10767 208 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 RPL23P62829 140 aaKnown RBP7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 ADIRFQ15847 76 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 AMMECR1LQ6DCA0 310 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 SMIM15Q7Z3B0 74 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 C9orf163Q8N9P6 203 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 TSKUQ8WUA8 353 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
HLA-DQA1-203ENST00000395363 A0A1B0GUT8 65 aa7.43□□□□□ -1.22
HLA-DQA1-203ENST00000395363 CT83Q5H943 113 aa7.43□□□□□ -1.22
HLA-DQA1-203ENST00000395363 NUP35Q8NFH5 326 aa7.43□□□□□ -1.22
HLA-DQA1-203ENST00000395363 CHCHD10Q8WYQ3 142 aaPredicted RBP7.43□□□□□ -1.22
HLA-DQA1-203ENST00000395363 OSTCQ9NRP0 149 aa7.43□□□□□ -1.22
HLA-DQA1-203ENST00000395363 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
HLA-DQA1-203ENST00000395363 RAB4AP20338 218 aa7.42□□□□□ -1.22
HLA-DQA1-203ENST00000395363 PMCHP20382 165 aa7.42□□□□□ -1.22
HLA-DQA1-203ENST00000395363 RNASE13Q5GAN3 156 aaKnown RBP7.42□□□□□ -1.22
HLA-DQA1-203ENST00000395363 TEX261Q6UWH6 196 aa7.42□□□□□ -1.22
HLA-DQA1-203ENST00000395363 SDIM1Q6ZPB5 146 aa7.42□□□□□ -1.22
HLA-DQA1-203ENST00000395363 KRTAP9-2Q9BYQ4 174 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms