RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 X6R8D5 127 aa13.73□□□□□ -0.21
LMNB1-202ENST00000395354 IGIPA6NJ69 53 aa13.72□□□□□ -0.21
LMNB1-202ENST00000395354 OR11H2Q8NH07 326 aa13.72□□□□□ -0.21
LMNB1-202ENST00000395354 TRGV2A0A075B6R0 118 aa13.71□□□□□ -0.21
LMNB1-202ENST00000395354 C20orf203Q8NBC4 194 aa13.71□□□□□ -0.21
LMNB1-202ENST00000395354 GAGE12BA1L429 117 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 K7EQD1 137 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 GAGE7O76087 117 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 DPM2O94777 84 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 GAGE12FP0CL80 117 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 GAGE12GP0CL81 117 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 GAGE12IP0CL82 117 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 LINC00612Q8N6U2 182 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 C14orf144Q96I85 54 aa13.71□□□□□ -0.22
LMNB1-202ENST00000395354 IGKCP01834 107 aa13.7□□□□□ -0.22
LMNB1-202ENST00000395354 NHLRC4P0CG21 123 aaPredicted RBP13.7□□□□□ -0.22
LMNB1-202ENST00000395354 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
LMNB1-202ENST00000395354 TENM3Q9P273 2699 aa13.69□□□□□ -0.22
LMNB1-202ENST00000395354 PLNP26678 52 aa13.69□□□□□ -0.22
LMNB1-202ENST00000395354 MRPL52Q86TS9 123 aaKnown RBP13.69□□□□□ -0.22
LMNB1-202ENST00000395354 TRBV7-3A0A075B6L6 115 aa13.68□□□□□ -0.22
LMNB1-202ENST00000395354 F8VRH5 84 aa13.68□□□□□ -0.22
LMNB1-202ENST00000395354 RPL36AP83881 106 aaKnown RBP13.68□□□□□ -0.22
LMNB1-202ENST00000395354 RPL36ALQ969Q0 106 aaKnown RBP13.68□□□□□ -0.22
LMNB1-202ENST00000395354 MRPL35Q9NZE8 188 aaKnown RBP13.68□□□□□ -0.22
LMNB1-202ENST00000395354 TRBV6-4A0A1B0GX49 114 aa13.67□□□□□ -0.22
LMNB1-202ENST00000395354 RPL39P62891 51 aaKnown RBP13.67□□□□□ -0.22
LMNB1-202ENST00000395354 Q9UF83 564 aa13.67□□□□□ -0.22
LMNB1-202ENST00000395354 PRKDCP78527 4128 aaKnown RBP13.67□□□□□ -0.22
LMNB1-202ENST00000395354 NPSP0C0P6 89 aa13.66□□□□□ -0.22
LMNB1-202ENST00000395354 HHLA3Q9XRX5 114 aa13.66□□□□□ -0.22
LMNB1-202ENST00000395354 CHTOPQ9Y3Y2 248 aaKnown RBP13.66□□□□□ -0.22
LMNB1-202ENST00000395354 LYRM9A8MSI8 78 aa13.66□□□□□ -0.22
LMNB1-202ENST00000395354 COTL1Q14019 142 aa13.66□□□□□ -0.22
LMNB1-202ENST00000395354 SLC25A29Q8N8R3 303 aa13.66□□□□□ -0.22
LMNB1-202ENST00000395354 PYGO1Q9Y3Y4 419 aa13.66□□□□□ -0.22
LMNB1-202ENST00000395354 PRSS29PA6NIE9 313 aa13.65□□□□□ -0.22
LMNB1-202ENST00000395354 MIFP14174 115 aa13.65□□□□□ -0.22
LMNB1-202ENST00000395354 PMVKQ15126 192 aa13.65□□□□□ -0.22
LMNB1-202ENST00000395354 SLC25A34Q6PIV7 304 aa13.65□□□□□ -0.22
LMNB1-202ENST00000395354 DAZ4Q86SG3 579 aaKnown RBP13.65□□□□□ -0.22
LMNB1-202ENST00000395354 ZNRF2Q8NHG8 242 aa13.65□□□□□ -0.22
LMNB1-202ENST00000395354 DEFB104AQ8WTQ1 72 aa13.65□□□□□ -0.22
LMNB1-202ENST00000395354 DAZ3Q9NR90 486 aaKnown RBP13.65□□□□□ -0.22
LMNB1-202ENST00000395354 COX8AP10176 69 aa13.64□□□□□ -0.23
LMNB1-202ENST00000395354 HNRNPA3P51991 378 aaKnown RBP13.64□□□□□ -0.23
LMNB1-202ENST00000395354 EMP1P54849 157 aa13.64□□□□□ -0.23
LMNB1-202ENST00000395354 PAPPA-AS1Q5QFB9 102 aa13.64□□□□□ -0.23
LMNB1-202ENST00000395354 STPG4Q8N801 248 aa13.64□□□□□ -0.23
LMNB1-202ENST00000395354 TRGV4A0A0C4DH28 118 aa13.63□□□□□ -0.23
LMNB1-202ENST00000395354 CRYBA4P53673 196 aa13.63□□□□□ -0.23
LMNB1-202ENST00000395354 FHL2Q14192 279 aa13.63□□□□□ -0.23
LMNB1-202ENST00000395354 ANKRD39Q53RE8 183 aa13.63□□□□□ -0.23
LMNB1-202ENST00000395354 CHCHD7Q9BUK0 85 aa13.63□□□□□ -0.23
LMNB1-202ENST00000395354 MRPS16Q9Y3D3 137 aaKnown RBP13.63□□□□□ -0.23
LMNB1-202ENST00000395354 IGHV4-28A0A0C4DH34 117 aa13.62□□□□□ -0.23
LMNB1-202ENST00000395354 UBE2D3P61077 147 aa13.62□□□□□ -0.23
LMNB1-202ENST00000395354 UBE2D2P62837 147 aa13.62□□□□□ -0.23
LMNB1-202ENST00000395354 Q8NAQ8 132 aa13.62□□□□□ -0.23
LMNB1-202ENST00000395354 CST9LQ9H4G1 147 aa13.62□□□□□ -0.23
LMNB1-202ENST00000395354 DEFB4AO15263 64 aa13.62□□□□□ -0.23
LMNB1-202ENST00000395354 LBHQ53QV2 105 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-202ENST00000395354 PHLDA1Q8WV24 401 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-202ENST00000395354 PRADC1Q9BSG0 188 aa13.61□□□□□ -0.23
LMNB1-202ENST00000395354 SPANXA1Q9NS26 97 aa13.61□□□□□ -0.23
LMNB1-202ENST00000395354 COL7A1Q02388 2944 aa13.61□□□□□ -0.23
LMNB1-202ENST00000395354 M0R143 59 aa13.6□□□□□ -0.23
LMNB1-202ENST00000395354 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
LMNB1-202ENST00000395354 STAB2Q8WWQ8 2551 aa13.6□□□□□ -0.23
LMNB1-202ENST00000395354 IGHV3-38A0A0C4DH36 116 aa13.59□□□□□ -0.23
LMNB1-202ENST00000395354 DLEU1O43261 78 aa13.59□□□□□ -0.23
LMNB1-202ENST00000395354 DEFB130BP0DP73 79 aa13.59□□□□□ -0.23
LMNB1-202ENST00000395354 DEFB130AP0DP74 79 aa13.59□□□□□ -0.23
LMNB1-202ENST00000395354 DNAH9Q9NYC9 4486 aa13.59□□□□□ -0.23
LMNB1-202ENST00000395354 IGLV4-3A0A075B6K6 122 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 GAGE12JA6NER3 117 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 CTAG1AP78358 180 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 GAGE1Q13065 139 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 GAGE4Q13068 117 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 GAGE5Q13069 117 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 GAGE13Q4V321 117 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 FAM222AQ5U5X8 452 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 TIMM21Q9BVV7 248 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 GTSF1LQ9H1H1 148 aa13.58□□□□□ -0.23
LMNB1-202ENST00000395354 BOD1L2Q8IYS8 172 aa13.58□□□□□ -0.24
LMNB1-202ENST00000395354 UBE2D4Q9Y2X8 147 aa13.58□□□□□ -0.24
LMNB1-202ENST00000395354 IGLV4-69A0A075B6H9 119 aa13.57□□□□□ -0.24
LMNB1-202ENST00000395354 A0A0J9YWU9 116 aa13.57□□□□□ -0.24
LMNB1-202ENST00000395354 FGF6P10767 208 aa13.57□□□□□ -0.24
LMNB1-202ENST00000395354 VCX2Q9H322 139 aa13.57□□□□□ -0.24
LMNB1-202ENST00000395354 C11orf68Q9H3H3 251 aaKnown RBP13.57□□□□□ -0.24
LMNB1-202ENST00000395354 TGP01266 2768 aa13.56□□□□□ -0.24
LMNB1-202ENST00000395354 SMAGPQ0VAQ4 97 aa13.56□□□□□ -0.24
LMNB1-202ENST00000395354 AMELXQ99217 191 aa13.56□□□□□ -0.24
LMNB1-202ENST00000395354 SNHG12Q9BXW3 62 aa13.56□□□□□ -0.24
LMNB1-202ENST00000395354 LINC00694P0DN24 101 aa13.55□□□□□ -0.24
LMNB1-202ENST00000395354 HUWE1Q7Z6Z7 4374 aaKnown RBP13.55□□□□□ -0.24
LMNB1-202ENST00000395354 SIVA1O15304 175 aa13.54□□□□□ -0.24
LMNB1-202ENST00000395354 NMUP48645 174 aa13.54□□□□□ -0.24
LMNB1-202ENST00000395354 MRPS36P82909 103 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms