RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 GAGE2AQ6NT46 116 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
NFKB1-202ENST00000394820 DNAL4O96015 105 aa9.88□□□□□ -0.83
NFKB1-202ENST00000394820 PFN2P35080 140 aa9.88□□□□□ -0.83
NFKB1-202ENST00000394820 FBN2P35556 2912 aa9.88□□□□□ -0.83
NFKB1-202ENST00000394820 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
NFKB1-202ENST00000394820 GAGE4Q13068 117 aa9.88□□□□□ -0.83
NFKB1-202ENST00000394820 GAGE5Q13069 117 aa9.88□□□□□ -0.83
NFKB1-202ENST00000394820 C10orf105Q8TEF2 133 aa9.88□□□□□ -0.83
NFKB1-202ENST00000394820 FASNP49327 2511 aaKnown RBP9.88□□□□□ -0.83
NFKB1-202ENST00000394820 LINC00158P58513 81 aa9.87□□□□□ -0.83
NFKB1-202ENST00000394820 RNF223E7ERA6 249 aa9.87□□□□□ -0.83
NFKB1-202ENST00000394820 IGHV3-30-3P0DP02 117 aa9.87□□□□□ -0.83
NFKB1-202ENST00000394820 IFITM1P13164 125 aa9.87□□□□□ -0.83
NFKB1-202ENST00000394820 ZMAT4Q9H898 229 aa9.87□□□□□ -0.83
NFKB1-202ENST00000394820 TMEM141Q96I45 108 aa9.87□□□□□ -0.83
NFKB1-202ENST00000394820 ZNF48Q96MX3 618 aaPredicted RBP9.87□□□□□ -0.83
NFKB1-202ENST00000394820 NF1P21359 2839 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
NFKB1-202ENST00000394820 SCGB1A1P11684 91 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 GAGE6Q13070 117 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 DEFB112Q30KQ8 113 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 USMG5Q96IX5 58 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 Q9H8V8 135 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 F8P00451 2351 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 GAGE7O76087 117 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 GAGE12FP0CL80 117 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 GAGE12GP0CL81 117 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 GAGE12IP0CL82 117 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 RPL35AP18077 110 aaKnown RBP9.86□□□□□ -0.83
NFKB1-202ENST00000394820 SLURP1P55000 103 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 PIFOQ8TCI5 191 aa9.86□□□□□ -0.83
NFKB1-202ENST00000394820 TMEM190Q8WZ59 177 aa9.85□□□□□ -0.83
NFKB1-202ENST00000394820 RHODO00212 210 aa9.85□□□□□ -0.83
NFKB1-202ENST00000394820 A0A096LPF7 62 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 B4DSR2 109 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 CLPSL2Q6UWE3 100 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 SLC25A29Q8N8R3 303 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 CHCHD5Q9BSY4 110 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 EDA2RQ9HAV5 297 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 Q9UF83 564 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 TRIAP1O43715 76 aa9.84□□□□□ -0.83
NFKB1-202ENST00000394820 TRGV11A0A075B6L2 103 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 CRLF1O75462 422 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 IGHV3-30P01768 117 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 IGHV3-30-5P0DP03 117 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 COX6B1P14854 86 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 Q9HAA7 133 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 CCDC179H3BU77 68 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 PAX4O43316 350 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 ZNF22P17026 224 aaPredicted RBP9.83□□□□□ -0.84
NFKB1-202ENST00000394820 SPATA25Q9BR10 227 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 A0A0J9YXY3 114 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 TINCRA0A1B0GVN0 87 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 NXPH4O95158 308 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 NDUFA7O95182 113 aa9.83□□□□□ -0.84
NFKB1-202ENST00000394820 IGHV3-33P01772 117 aa9.82□□□□□ -0.84
NFKB1-202ENST00000394820 CRYGDP07320 174 aa9.82□□□□□ -0.84
NFKB1-202ENST00000394820 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
NFKB1-202ENST00000394820 C20orf203Q8NBC4 194 aa9.82□□□□□ -0.84
NFKB1-202ENST00000394820 LEPROTO15243 131 aa9.82□□□□□ -0.84
NFKB1-202ENST00000394820 ELANEP08246 267 aa9.82□□□□□ -0.84
NFKB1-202ENST00000394820 ICOSQ9Y6W8 199 aa9.82□□□□□ -0.84
NFKB1-202ENST00000394820 TSHBP01222 138 aa9.81□□□□□ -0.84
NFKB1-202ENST00000394820 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
NFKB1-202ENST00000394820 CDIP1Q9H305 208 aa9.81□□□□□ -0.84
NFKB1-202ENST00000394820 USP24Q9UPU5 2620 aa9.81□□□□□ -0.84
NFKB1-202ENST00000394820 STHQ8IWL8 128 aa9.81□□□□□ -0.84
NFKB1-202ENST00000394820 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
NFKB1-202ENST00000394820 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
NFKB1-202ENST00000394820 GPHB5Q86YW7 130 aa9.81□□□□□ -0.84
NFKB1-202ENST00000394820 NIPBLQ6KC79 2804 aaeCLIP9.81□□□□□ -0.84
NFKB1-202ENST00000394820 IGLV4-69A0A075B6H9 119 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 IGHV4OR15-8A0A075B7B6 117 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 A0A087WW49 117 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 TEX15Q9BXT5 2789 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 LENEPQ9Y5L5 61 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 FAM236AA0A1B0GUQ0 79 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 FAM236BA0A1B0GV22 79 aa9.8□□□□□ -0.84
NFKB1-202ENST00000394820 U3KQE9 123 aa9.79□□□□□ -0.84
NFKB1-202ENST00000394820 IGLV4-3A0A075B6K6 122 aa9.79□□□□□ -0.84
NFKB1-202ENST00000394820 IGHG2P01859 326 aa9.79□□□□□ -0.84
NFKB1-202ENST00000394820 A6NDX4 124 aa9.79□□□□□ -0.84
NFKB1-202ENST00000394820 HTN3P15516 51 aa9.79□□□□□ -0.84
NFKB1-202ENST00000394820 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 M0QY20 66 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 FHL3Q13643 280 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 C9orf153Q5TBE3 101 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 TRGV4A0A0C4DH28 118 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 IGKV3D-7A0A0C4DH55 119 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 UBE2D1P51668 147 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 TIMM17AQ99595 171 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
NFKB1-202ENST00000394820 NDUFV3P56181 108 aaKnown RBP9.78□□□□□ -0.84
NFKB1-202ENST00000394820 HERV-K104P63124 156 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms