RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 TRRAPQ9Y4A5 3859 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 TRGV2A0A075B6R0 118 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 hDV102S1A0JD36 115 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 GAGE12BA1L429 117 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 IGIPA6NJ69 53 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 GAGE7O76087 117 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 GAGE12FP0CL80 117 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 GAGE12GP0CL81 117 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 GAGE12IP0CL82 117 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 OXLD1Q5BKU9 147 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 LINC00612Q8N6U2 182 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 TIMM17AQ99595 171 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 DKK2Q9UBU2 259 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 IGHV4-30-4P0DP06 118 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 OCIAD2Q56VL3 154 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 C20orf203Q8NBC4 194 aa6.92□□□□□ -1.3
SYT1-202ENST00000393240 K7EQD1 137 aa6.91□□□□□ -1.3
SYT1-202ENST00000393240 VAMP3Q15836 100 aa6.91□□□□□ -1.3
SYT1-202ENST00000393240 BAALCQ8WXS3 180 aa6.91□□□□□ -1.3
SYT1-202ENST00000393240 CST9LQ9H4G1 147 aa6.91□□□□□ -1.3
SYT1-202ENST00000393240 Q9UF83 564 aa6.91□□□□□ -1.3
SYT1-202ENST00000393240 TRBV7-3A0A075B6L6 115 aa6.91□□□□□ -1.3
SYT1-202ENST00000393240 TRBV6-4A0A1B0GX49 114 aa6.91□□□□□ -1.3
SYT1-202ENST00000393240 A8MZ25 164 aa6.91□□□□□ -1.3
SYT1-202ENST00000393240 DPM2O94777 84 aa6.9□□□□□ -1.3
SYT1-202ENST00000393240 IGKCP01834 107 aa6.9□□□□□ -1.3
SYT1-202ENST00000393240 KRTAP10-11P60412 298 aa6.9□□□□□ -1.3
SYT1-202ENST00000393240 RPL39P62891 51 aaKnown RBP6.9□□□□□ -1.3
SYT1-202ENST00000393240 RPL36AP83881 106 aaKnown RBP6.9□□□□□ -1.3
SYT1-202ENST00000393240 SLC25A29Q8N8R3 303 aa6.9□□□□□ -1.3
SYT1-202ENST00000393240 RPL36ALQ969Q0 106 aaKnown RBP6.9□□□□□ -1.3
SYT1-202ENST00000393240 LYRM9A8MSI8 78 aa6.9□□□□□ -1.31
SYT1-202ENST00000393240 TMEM238C9JI98 176 aa6.9□□□□□ -1.31
SYT1-202ENST00000393240 F8VRH5 84 aa6.9□□□□□ -1.31
SYT1-202ENST00000393240 K7ERU9 68 aa6.9□□□□□ -1.31
SYT1-202ENST00000393240 PLNP26678 52 aa6.9□□□□□ -1.31
SYT1-202ENST00000393240 DEFB135Q30KP9 77 aa6.9□□□□□ -1.31
SYT1-202ENST00000393240 DEFB104AQ8WTQ1 72 aa6.9□□□□□ -1.31
SYT1-202ENST00000393240 MRPL35Q9NZE8 188 aaKnown RBP6.9□□□□□ -1.31
SYT1-202ENST00000393240 HHLA3Q9XRX5 114 aa6.9□□□□□ -1.31
SYT1-202ENST00000393240 EMP1P54849 157 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 Q6ZVH6 145 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 OR11H2Q8NH07 326 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 ZNRF2Q8NHG8 242 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 RNF183Q96D59 192 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 NOTCH3Q9UM47 2321 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 MIFP14174 115 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 FHL2Q14192 279 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 DAZ4Q86SG3 579 aaKnown RBP6.89□□□□□ -1.31
SYT1-202ENST00000393240 DAZ3Q9NR90 486 aaKnown RBP6.89□□□□□ -1.31
SYT1-202ENST00000393240 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
SYT1-202ENST00000393240 PRSS29PA6NIE9 313 aa6.88□□□□□ -1.31
SYT1-202ENST00000393240 PMVKQ15126 192 aa6.88□□□□□ -1.31
SYT1-202ENST00000393240 TRGV4A0A0C4DH28 118 aa6.88□□□□□ -1.31
SYT1-202ENST00000393240 UBE2D3P61077 147 aa6.88□□□□□ -1.31
SYT1-202ENST00000393240 UBE2D2P62837 147 aa6.88□□□□□ -1.31
SYT1-202ENST00000393240 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
SYT1-202ENST00000393240 COX8AP10176 69 aa6.87□□□□□ -1.31
SYT1-202ENST00000393240 CRYBA4P53673 196 aa6.87□□□□□ -1.31
SYT1-202ENST00000393240 PAPPA-AS1Q5QFB9 102 aa6.87□□□□□ -1.31
SYT1-202ENST00000393240 SLC25A34Q6PIV7 304 aa6.87□□□□□ -1.31
SYT1-202ENST00000393240 IGHV4-28A0A0C4DH34 117 aa6.87□□□□□ -1.31
SYT1-202ENST00000393240 DEFB130BP0DP73 79 aa6.87□□□□□ -1.31
SYT1-202ENST00000393240 DEFB130AP0DP74 79 aa6.87□□□□□ -1.31
SYT1-202ENST00000393240 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
SYT1-202ENST00000393240 PRADC1Q9BSG0 188 aa6.87□□□□□ -1.31
SYT1-202ENST00000393240 Q8NAQ8 132 aa6.86□□□□□ -1.31
SYT1-202ENST00000393240 IGHV3-38A0A0C4DH36 116 aa6.86□□□□□ -1.31
SYT1-202ENST00000393240 FAM222AQ5U5X8 452 aa6.86□□□□□ -1.31
SYT1-202ENST00000393240 GTSF1LQ9H1H1 148 aa6.86□□□□□ -1.31
SYT1-202ENST00000393240 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
SYT1-202ENST00000393240 IGLV4-3A0A075B6K6 122 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 GAGE12JA6NER3 117 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 GAGE4Q13068 117 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 GAGE5Q13069 117 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 GAGE13Q4V321 117 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 ZC2HC1BQ5TFG8 222 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 SAMD5Q5TGI4 173 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 UBE2D4Q9Y2X8 147 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 G3V4G9 280 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 TAX1BP3O14907 124 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 TIMM21Q9BVV7 248 aa6.85□□□□□ -1.31
SYT1-202ENST00000393240 IGLV4-69A0A075B6H9 119 aa6.84□□□□□ -1.31
SYT1-202ENST00000393240 BOD1L2Q8IYS8 172 aa6.84□□□□□ -1.31
SYT1-202ENST00000393240 VCX2Q9H322 139 aa6.84□□□□□ -1.31
SYT1-202ENST00000393240 LINC00694P0DN24 101 aa6.84□□□□□ -1.31
SYT1-202ENST00000393240 AMELXQ99217 191 aa6.84□□□□□ -1.31
SYT1-202ENST00000393240 OPRPNQ99935 248 aaPredicted RBP6.84□□□□□ -1.31
SYT1-202ENST00000393240 MAST4O15021 2626 aa6.84□□□□□ -1.32
SYT1-202ENST00000393240 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
SYT1-202ENST00000393240 FGF6P10767 208 aa6.83□□□□□ -1.32
SYT1-202ENST00000393240 NTM-AS1Q6ZSK4 140 aa6.83□□□□□ -1.32
SYT1-202ENST00000393240 FAM104AQ969W3 186 aa6.83□□□□□ -1.32
SYT1-202ENST00000393240 PRO0255Q9UI72 69 aa6.83□□□□□ -1.32
SYT1-202ENST00000393240 CMYA5Q8N3K9 4069 aa6.83□□□□□ -1.32
SYT1-202ENST00000393240 STAB1Q9NY15 2570 aa6.83□□□□□ -1.32
SYT1-202ENST00000393240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.83□□□□□ -1.32
SYT1-202ENST00000393240 IGKV2-29A2NJV5 120 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms