RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 DKK2Q9UBU2 259 aa8.18□□□□□ -1.1
SMARCAL1-203ENST00000392128 TP53TG1Q9Y2A0 90 aa8.18□□□□□ -1.1
SMARCAL1-203ENST00000392128 COX11Q9Y6N1 276 aa8.18□□□□□ -1.1
SMARCAL1-203ENST00000392128 TRAV12-1A0A0B4J245 112 aa8.18□□□□□ -1.1
SMARCAL1-203ENST00000392128 Q9UF83 564 aa8.18□□□□□ -1.1
SMARCAL1-203ENST00000392128 GAGE12BA1L429 117 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 GAGE7O76087 117 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 GAGE12FP0CL80 117 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 GAGE12GP0CL81 117 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 GAGE12IP0CL82 117 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 EGFEM1PQ0D2K5 195 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 OXLD1Q5BKU9 147 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 UQCR10Q9UDW1 63 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 TRGV2A0A075B6R0 118 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 A0A087WX48 190 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 TRBV10-1A0A0K0K1A3 114 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 IGIPA6NJ69 53 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 IGHV4-30-4P0DP06 118 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
SMARCAL1-203ENST00000392128 K7EQD1 137 aa8.16□□□□□ -1.1
SMARCAL1-203ENST00000392128 RPL39P62891 51 aaKnown RBP8.16□□□□□ -1.1
SMARCAL1-203ENST00000392128 LINC00612Q8N6U2 182 aa8.16□□□□□ -1.1
SMARCAL1-203ENST00000392128 C20orf203Q8NBC4 194 aa8.16□□□□□ -1.1
SMARCAL1-203ENST00000392128 BAALCQ8WXS3 180 aa8.16□□□□□ -1.1
SMARCAL1-203ENST00000392128 TMEM141Q96I45 108 aa8.16□□□□□ -1.1
SMARCAL1-203ENST00000392128 TRAV26-1A0A087WT03 109 aa8.15□□□□□ -1.1
SMARCAL1-203ENST00000392128 DEFB135Q30KP9 77 aa8.15□□□□□ -1.1
SMARCAL1-203ENST00000392128 DPM2O94777 84 aa8.15□□□□□ -1.1
SMARCAL1-203ENST00000392128 IGKCP01834 107 aa8.15□□□□□ -1.1
SMARCAL1-203ENST00000392128 KRTAP10-11P60412 298 aa8.15□□□□□ -1.1
SMARCAL1-203ENST00000392128 TRBV7-3A0A075B6L6 115 aa8.14□□□□□ -1.11
SMARCAL1-203ENST00000392128 EMP1P54849 157 aa8.14□□□□□ -1.11
SMARCAL1-203ENST00000392128 BATFQ16520 125 aa8.14□□□□□ -1.11
SMARCAL1-203ENST00000392128 SLC25A29Q8N8R3 303 aa8.14□□□□□ -1.11
SMARCAL1-203ENST00000392128 MRPL35Q9NZE8 188 aaKnown RBP8.14□□□□□ -1.11
SMARCAL1-203ENST00000392128 STAB1Q9NY15 2570 aa8.14□□□□□ -1.11
SMARCAL1-203ENST00000392128 TRBV6-4A0A1B0GX49 114 aa8.14□□□□□ -1.11
SMARCAL1-203ENST00000392128 F8VRH5 84 aa8.14□□□□□ -1.11
SMARCAL1-203ENST00000392128 PLNP26678 52 aa8.13□□□□□ -1.11
SMARCAL1-203ENST00000392128 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
SMARCAL1-203ENST00000392128 OR11H2Q8NH07 326 aa8.13□□□□□ -1.11
SMARCAL1-203ENST00000392128 ZNRF2Q8NHG8 242 aa8.13□□□□□ -1.11
SMARCAL1-203ENST00000392128 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
SMARCAL1-203ENST00000392128 HHLA3Q9XRX5 114 aa8.13□□□□□ -1.11
SMARCAL1-203ENST00000392128 A8MZ25 164 aa8.13□□□□□ -1.11
SMARCAL1-203ENST00000392128 STPG4Q8N801 248 aa8.13□□□□□ -1.11
SMARCAL1-203ENST00000392128 CMYA5Q8N3K9 4069 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 PRSS29PA6NIE9 313 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 LYRM9A8MSI8 78 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 MTURNQ8N3F0 131 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 RNF183Q96D59 192 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 CHCHD7Q9BUK0 85 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 MAST4O15021 2626 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 TRGV4A0A0C4DH28 118 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 MIFP14174 115 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 UBE2D3P61077 147 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 UBE2D2P62837 147 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 FHL2Q14192 279 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 PMVKQ15126 192 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 DAZ4Q86SG3 579 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 DAZ3Q9NR90 486 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 PYGO1Q9Y3Y4 419 aa8.12□□□□□ -1.11
SMARCAL1-203ENST00000392128 IGHV3-38A0A0C4DH36 116 aa8.11□□□□□ -1.11
SMARCAL1-203ENST00000392128 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
SMARCAL1-203ENST00000392128 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
SMARCAL1-203ENST00000392128 COX8AP10176 69 aa8.11□□□□□ -1.11
SMARCAL1-203ENST00000392128 HNRNPA3P51991 378 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-203ENST00000392128 SLC25A34Q6PIV7 304 aa8.11□□□□□ -1.11
SMARCAL1-203ENST00000392128 IGHV4-28A0A0C4DH34 117 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 G3V4G9 280 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 TSPAN13O95857 204 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 FAM222AQ5U5X8 452 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 Q8NAQ8 132 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 GAGE12JA6NER3 117 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 GAGE4Q13068 117 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 GAGE5Q13069 117 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 GAGE13Q4V321 117 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 ZC2HC1BQ5TFG8 222 aa8.1□□□□□ -1.11
SMARCAL1-203ENST00000392128 IGLV4-3A0A075B6K6 122 aa8.09□□□□□ -1.11
SMARCAL1-203ENST00000392128 HERV-K104P63124 156 aa8.09□□□□□ -1.11
SMARCAL1-203ENST00000392128 PAPPA-AS1Q5QFB9 102 aa8.09□□□□□ -1.11
SMARCAL1-203ENST00000392128 PRADC1Q9BSG0 188 aa8.09□□□□□ -1.11
SMARCAL1-203ENST00000392128 SPANXA1Q9NS26 97 aa8.09□□□□□ -1.11
SMARCAL1-203ENST00000392128 MRPS16Q9Y3D3 137 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-203ENST00000392128 IGLV4-69A0A075B6H9 119 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 A4D1N5 150 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 LINC00694P0DN24 101 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 FGF6P10767 208 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 SAMD5Q5TGI4 173 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 OPRPNQ99935 248 aaPredicted RBP8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 GTSF1LQ9H1H1 148 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 UBE2D4Q9Y2X8 147 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 CKS1BP61024 79 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 FAM104AQ969W3 186 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 TP73-AS1Q9UF72 201 aa8.08□□□□□ -1.12
SMARCAL1-203ENST00000392128 COL6A5A8TX70 2615 aa8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 LOC100131303A0A0U1RQF7 123 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms