RNA–Protein interactions for RNA: ENST00000391857.8

RPL13A-201, Transcript of ribosomal protein L13a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13A, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-201ENST00000391857 IFITM3Q01628 133 aa8.59□□□□□ -1.03
RPL13A-201ENST00000391857 NKX6-2Q9C056 277 aaPredicted RBP8.59□□□□□ -1.03
RPL13A-201ENST00000391857 SERF2P84101 59 aa8.58□□□□□ -1.04
RPL13A-201ENST00000391857 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
RPL13A-201ENST00000391857 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
RPL13A-201ENST00000391857 SUMO4Q6EEV6 95 aa8.58□□□□□ -1.04
RPL13A-201ENST00000391857 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
RPL13A-201ENST00000391857 AP1S3Q96PC3 154 aa8.58□□□□□ -1.04
RPL13A-201ENST00000391857 TNFSF18Q9UNG2 199 aa8.58□□□□□ -1.04
RPL13A-201ENST00000391857 MUC17Q685J3 4493 aa8.57□□□□□ -1.04
RPL13A-201ENST00000391857 IGHV1-58A0A0C4DH39 117 aa8.57□□□□□ -1.04
RPL13A-201ENST00000391857 ZNF726P1Q15940 193 aa8.57□□□□□ -1.04
RPL13A-201ENST00000391857 MED28Q9H204 178 aa8.57□□□□□ -1.04
RPL13A-201ENST00000391857 TRAV1-1A0A0B4J248 108 aa8.56□□□□□ -1.04
RPL13A-201ENST00000391857 LOC107984640A0A0U1RRK4 108 aa8.56□□□□□ -1.04
RPL13A-201ENST00000391857 INMT-MINDY4F8WBC2 141 aa8.56□□□□□ -1.04
RPL13A-201ENST00000391857 MGPP08493 103 aa8.56□□□□□ -1.04
RPL13A-201ENST00000391857 COTL1Q14019 142 aa8.56□□□□□ -1.04
RPL13A-201ENST00000391857 RASL11AQ6T310 242 aa8.56□□□□□ -1.04
RPL13A-201ENST00000391857 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
RPL13A-201ENST00000391857 RPL13AP40429 203 aaKnown RBP8.54□□□□□ -1.04
RPL13A-201ENST00000391857 XCL1P47992 114 aa8.54□□□□□ -1.04
RPL13A-201ENST00000391857 KRTAP11-1Q8IUC1 163 aa8.54□□□□□ -1.04
RPL13A-201ENST00000391857 ZNF561-AS1K7EIQ3 104 aa8.53□□□□□ -1.04
RPL13A-201ENST00000391857 TSPAN13O95857 204 aa8.53□□□□□ -1.04
RPL13A-201ENST00000391857 BCL2P10415 239 aa8.53□□□□□ -1.04
RPL13A-201ENST00000391857 UBE2D1P51668 147 aa8.53□□□□□ -1.04
RPL13A-201ENST00000391857 MARVELD1Q9BSK0 173 aa8.53□□□□□ -1.04
RPL13A-201ENST00000391857 MLST8Q9BVC4 326 aa8.53□□□□□ -1.04
RPL13A-201ENST00000391857 CTXND1A0A1B0GTU2 59 aa8.52□□□□□ -1.05
RPL13A-201ENST00000391857 FGF6P10767 208 aa8.52□□□□□ -1.05
RPL13A-201ENST00000391857 CAMPP49913 170 aa8.52□□□□□ -1.05
RPL13A-201ENST00000391857 AMMECR1LQ6DCA0 310 aa8.52□□□□□ -1.05
RPL13A-201ENST00000391857 A0A087WZ39 114 aa8.51□□□□□ -1.05
RPL13A-201ENST00000391857 CCL25O15444 150 aa8.51□□□□□ -1.05
RPL13A-201ENST00000391857 SSNA1O43805 119 aa8.51□□□□□ -1.05
RPL13A-201ENST00000391857 AKR1C3P42330 323 aa8.51□□□□□ -1.05
RPL13A-201ENST00000391857 EIF5AP63241 154 aaKnown RBP8.51□□□□□ -1.05
RPL13A-201ENST00000391857 RNASEKQ6P5S7 137 aaKnown RBP8.51□□□□□ -1.05
RPL13A-201ENST00000391857 NUP35Q8NFH5 326 aa8.51□□□□□ -1.05
RPL13A-201ENST00000391857 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
RPL13A-201ENST00000391857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
RPL13A-201ENST00000391857 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
RPL13A-201ENST00000391857 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
RPL13A-201ENST00000391857 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
RPL13A-201ENST00000391857 FHITP49789 147 aa8.5□□□□□ -1.05
RPL13A-201ENST00000391857 MEF2BQ02080 365 aaPredicted RBP8.5□□□□□ -1.05
RPL13A-201ENST00000391857 TCEAL7Q9BRU2 100 aa8.5□□□□□ -1.05
RPL13A-201ENST00000391857 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
RPL13A-201ENST00000391857 H7C423 109 aa8.49□□□□□ -1.05
RPL13A-201ENST00000391857 APOMO95445 188 aa8.49□□□□□ -1.05
RPL13A-201ENST00000391857 NTF3P20783 257 aa8.49□□□□□ -1.05
RPL13A-201ENST00000391857 DEFA1P59665 94 aa8.49□□□□□ -1.05
RPL13A-201ENST00000391857 Q6ZNX1 250 aa8.49□□□□□ -1.05
RPL13A-201ENST00000391857 ISOC2Q96AB3 205 aa8.49□□□□□ -1.05
RPL13A-201ENST00000391857 CARHSP1Q9Y2V2 147 aaKnown RBP8.49□□□□□ -1.05
RPL13A-201ENST00000391857 IGLC6P0CF74 106 aa8.48□□□□□ -1.05
RPL13A-201ENST00000391857 CST9LP1Q5W188 147 aa8.48□□□□□ -1.05
RPL13A-201ENST00000391857 BAGE2Q86Y30 109 aa8.48□□□□□ -1.05
RPL13A-201ENST00000391857 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
RPL13A-201ENST00000391857 STOML3Q8TAV4 291 aa8.47□□□□□ -1.05
RPL13A-201ENST00000391857 S100A9P06702 114 aaKnown RBP8.46□□□□□ -1.06
RPL13A-201ENST00000391857 RPL18AQ02543 176 aaKnown RBP8.46□□□□□ -1.06
RPL13A-201ENST00000391857 TPPP3Q9BW30 176 aa8.46□□□□□ -1.06
RPL13A-201ENST00000391857 NCR2O95944 276 aa8.45□□□□□ -1.06
RPL13A-201ENST00000391857 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
RPL13A-201ENST00000391857 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
RPL13A-201ENST00000391857 SS18Q15532 418 aa8.44□□□□□ -1.06
RPL13A-201ENST00000391857 RPL7L1Q6DKI1 246 aaKnown RBP8.44□□□□□ -1.06
RPL13A-201ENST00000391857 TSKUQ8WUA8 353 aa8.44□□□□□ -1.06
RPL13A-201ENST00000391857 C2orf48Q96LS8 159 aa8.44□□□□□ -1.06
RPL13A-201ENST00000391857 OPRPNQ99935 248 aaPredicted RBP8.44□□□□□ -1.06
RPL13A-201ENST00000391857 ALG5Q9Y673 324 aa8.44□□□□□ -1.06
RPL13A-201ENST00000391857 FAM168BA1KXE4 195 aa8.43□□□□□ -1.06
RPL13A-201ENST00000391857 MAP1LC3B2A6NCE7 125 aa8.43□□□□□ -1.06
RPL13A-201ENST00000391857 PAGE4O60829 102 aa8.43□□□□□ -1.06
RPL13A-201ENST00000391857 APCSP02743 223 aa8.43□□□□□ -1.06
RPL13A-201ENST00000391857 TRGC1P0CF51 173 aa8.43□□□□□ -1.06
RPL13A-201ENST00000391857 GATD1Q8NB37 220 aa8.43□□□□□ -1.06
RPL13A-201ENST00000391857 MAP1LC3BQ9GZQ8 125 aa8.43□□□□□ -1.06
RPL13A-201ENST00000391857 RPP21Q9H633 154 aaKnown RBP8.43□□□□□ -1.06
RPL13A-201ENST00000391857 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
RPL13A-201ENST00000391857 BCL2L11O43521 198 aa8.42□□□□□ -1.06
RPL13A-201ENST00000391857 OR2D3Q8NGH3 330 aa8.42□□□□□ -1.06
RPL13A-201ENST00000391857 TMEM101Q96IK0 257 aa8.42□□□□□ -1.06
RPL13A-201ENST00000391857 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
RPL13A-201ENST00000391857 CDIP1Q9H305 208 aa8.42□□□□□ -1.06
RPL13A-201ENST00000391857 MALP21145 153 aa8.41□□□□□ -1.06
RPL13A-201ENST00000391857 RNF151Q2KHN1 245 aa8.41□□□□□ -1.06
RPL13A-201ENST00000391857 AKR1C8PQ5T2L2 129 aa8.41□□□□□ -1.06
RPL13A-201ENST00000391857 EIF5AL1Q6IS14 154 aaKnown RBP8.41□□□□□ -1.06
RPL13A-201ENST00000391857 CDC42SE2Q9NRR3 84 aa8.41□□□□□ -1.06
RPL13A-201ENST00000391857 F2Z2F3 143 aa8.4□□□□□ -1.06
RPL13A-201ENST00000391857 ESDP10768 282 aa8.4□□□□□ -1.06
RPL13A-201ENST00000391857 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
RPL13A-201ENST00000391857 TMUB2Q71RG4 321 aa8.4□□□□□ -1.06
RPL13A-201ENST00000391857 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.06
RPL13A-201ENST00000391857 RPL39LQ96EH5 51 aaKnown RBP8.4□□□□□ -1.06
RPL13A-201ENST00000391857 BATF3Q9NR55 127 aa8.4□□□□□ -1.06
RPL13A-201ENST00000391857 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms