RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 NKX2-5P52952 324 aaPredicted RBP4.57□□□□□ -1.68
RNU1-56P-201ENST00000391303 GAGE6Q13070 117 aa4.57□□□□□ -1.68
RNU1-56P-201ENST00000391303 TWIST1Q15672 202 aa4.57□□□□□ -1.68
RNU1-56P-201ENST00000391303 CFAP161Q6P656 301 aa4.57□□□□□ -1.68
RNU1-56P-201ENST00000391303 Q6ZNX1 250 aa4.57□□□□□ -1.68
RNU1-56P-201ENST00000391303 C20orf203Q8NBC4 194 aa4.57□□□□□ -1.68
RNU1-56P-201ENST00000391303 RNF185Q96GF1 192 aa4.57□□□□□ -1.68
RNU1-56P-201ENST00000391303 AP5S1Q9NUS5 200 aa4.57□□□□□ -1.68
RNU1-56P-201ENST00000391303 ZNF25P17030 456 aaPredicted RBP4.56□□□□□ -1.68
RNU1-56P-201ENST00000391303 AMTP48728 403 aa4.56□□□□□ -1.68
RNU1-56P-201ENST00000391303 SSTP61278 116 aa4.56□□□□□ -1.68
RNU1-56P-201ENST00000391303 HAMPP81172 84 aa4.56□□□□□ -1.68
RNU1-56P-201ENST00000391303 AKAP14Q86UN6 197 aa4.56□□□□□ -1.68
RNU1-56P-201ENST00000391303 OCC1Q8TAD7 63 aa4.56□□□□□ -1.68
RNU1-56P-201ENST00000391303 GFRA4Q9GZZ7 299 aa4.56□□□□□ -1.68
RNU1-56P-201ENST00000391303 PKIGQ9Y2B9 76 aa4.56□□□□□ -1.68
RNU1-56P-201ENST00000391303 FAT1Q14517 4588 aa4.55□□□□□ -1.68
RNU1-56P-201ENST00000391303 TRBV6-5A0A0K0K1A5 114 aa4.55□□□□□ -1.68
RNU1-56P-201ENST00000391303 KRTAP10-4P60372 401 aaPredicted RBP4.55□□□□□ -1.68
RNU1-56P-201ENST00000391303 CIRBPQ14011 172 aaKnown RBP4.55□□□□□ -1.68
RNU1-56P-201ENST00000391303 SDIM1Q6ZPB5 146 aa4.55□□□□□ -1.68
RNU1-56P-201ENST00000391303 BORCS7Q96B45 105 aa4.55□□□□□ -1.68
RNU1-56P-201ENST00000391303 DMBT1Q9UGM3 2413 aaPredicted RBP4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 IGLV4-60A0A075B6I1 120 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 IGHV3-64A0A075B6Q5 118 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 K7EN84 100 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 GATCO43716 136 aaKnown RBP4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 PPP1R17O96001 155 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 SMAGPQ0VAQ4 97 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 LINC01620Q4KN68 170 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 SERTAD4-AS1Q5TG53 156 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 GATD1Q8NB37 220 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 GTSF1Q8WW33 167 aa4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 RNASE7Q9H1E1 156 aaKnown RBP4.54□□□□□ -1.68
RNU1-56P-201ENST00000391303 A0A1B0GUT8 65 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 hDV102S1A0JD36 115 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 SDHAF1A6NFY7 115 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 I3L3M4 83 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 CCL25O15444 150 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 APCSP02743 223 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 RPL37AP61513 92 aaKnown RBP4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 AMMECR1LQ6DCA0 310 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 CLPSL2Q6UWE3 100 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 TSKUQ8WUA8 353 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 MRAP2Q96G30 205 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 BTF3L4Q96K17 158 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 TMEM191AQ9H0A3 160 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 OSTCQ9NRP0 149 aa4.53□□□□□ -1.68
RNU1-56P-201ENST00000391303 IGLV10-54A0A075B6I4 117 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 TRBV27A0A0K0K1C4 114 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 FGF6P10767 208 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 FAM74A3Q4VXF1 159 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 ALKAL2Q6UX46 152 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 MRPL52Q86TS9 123 aaKnown RBP4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 LINC01551Q86U37 167 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 OR5A1Q8NGJ0 315 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 TMEM101Q96IK0 257 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 SMIM7Q9BQ49 75 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 LINC00474Q9P2X8 69 aa4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 SRRM2Q9UQ35 2752 aaKnown RBP4.52□□□□□ -1.69
RNU1-56P-201ENST00000391303 ZNF727A8MUV8 499 aa4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 HIGD1CA8MV81 97 aa4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 TCAPO15273 167 aa4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 ESDP10768 282 aa4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 PMCHP20382 165 aa4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 RPS10P46783 165 aaKnown RBP4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 RIGQ13278 110 aa4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 Q6ZRU5 148 aa4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 EIF5A2Q9GZV4 153 aaKnown RBP4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 ST20Q9HBF5 79 aa4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 CSDC2Q9Y534 153 aaKnown RBP4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.51□□□□□ -1.69
RNU1-56P-201ENST00000391303 TRAV26-2A0A0B4J265 109 aa4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 A0A1B0GW15 77 aa4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 GAGE12HA6NDE8 117 aa4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 VCYO14598 125 aa4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 PPP1R2P9O14990 202 aa4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 POLR2KP53803 58 aaKnown RBP4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 RNASEKQ6P5S7 137 aaKnown RBP4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 C15orf56Q8N910 161 aa4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 SPACA4Q8TDM5 124 aa4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 CHCHD10Q8WYQ3 142 aaPredicted RBP4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 RPL39LQ96EH5 51 aaKnown RBP4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 PLAC8Q9NZF1 115 aa4.5□□□□□ -1.69
RNU1-56P-201ENST00000391303 A0A087WYN8 130 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 IGHV1-58A0A0C4DH39 117 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 C7orf77A4D0Y5 90 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 LINC00862A6NCI5 91 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 SLPIP03973 132 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 SRP19P09132 144 aaKnown RBP4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 RAB4AP20338 218 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 RPL32P62910 135 aaKnown RBP4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 SS18Q15532 418 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 TMEM241Q24JQ0 296 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 CD164L2Q6UWJ8 174 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 C7orf33Q8WU49 177 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 DPH3Q96FX2 82 aa4.49□□□□□ -1.69
RNU1-56P-201ENST00000391303 KIR2DL4Q99706 377 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms