RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
SMN2-203ENST00000380743 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
SMN2-203ENST00000380743 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
SMN2-203ENST00000380743 TRAV8-6A0A0B4J262 113 aa8.64□□□□□ -1.03
SMN2-203ENST00000380743 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
SMN2-203ENST00000380743 I3L3M4 83 aa8.64□□□□□ -1.03
SMN2-203ENST00000380743 SIVA1O15304 175 aa8.64□□□□□ -1.03
SMN2-203ENST00000380743 FABP9Q0Z7S8 132 aa8.64□□□□□ -1.03
SMN2-203ENST00000380743 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
SMN2-203ENST00000380743 VCYO14598 125 aa8.63□□□□□ -1.03
SMN2-203ENST00000380743 PHOX2AO14813 284 aa8.63□□□□□ -1.03
SMN2-203ENST00000380743 PMCHP20382 165 aa8.63□□□□□ -1.03
SMN2-203ENST00000380743 COTL1Q14019 142 aa8.63□□□□□ -1.03
SMN2-203ENST00000380743 TMEM97Q5BJF2 176 aa8.63□□□□□ -1.03
SMN2-203ENST00000380743 TRAPPC1Q9Y5R8 145 aa8.63□□□□□ -1.03
SMN2-203ENST00000380743 COLCA2A8K830 154 aa8.62□□□□□ -1.03
SMN2-203ENST00000380743 TSHBP01222 138 aa8.62□□□□□ -1.03
SMN2-203ENST00000380743 IQCJQ1A5X6 159 aa8.62□□□□□ -1.03
SMN2-203ENST00000380743 Q8N3U1 123 aa8.62□□□□□ -1.03
SMN2-203ENST00000380743 LAMTOR2Q9Y2Q5 125 aa8.62□□□□□ -1.03
SMN2-203ENST00000380743 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
SMN2-203ENST00000380743 IGHV1-24A0A0C4DH33 117 aa8.61□□□□□ -1.03
SMN2-203ENST00000380743 DNAH10OSP0CZ25 163 aa8.61□□□□□ -1.03
SMN2-203ENST00000380743 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
SMN2-203ENST00000380743 ALKBH7Q9BT30 221 aaPredicted RBP8.61□□□□□ -1.03
SMN2-203ENST00000380743 SMIM2Q9BVW6 85 aa8.61□□□□□ -1.03
SMN2-203ENST00000380743 LOC389332A0A1B0GUA5 103 aa8.6□□□□□ -1.03
SMN2-203ENST00000380743 PRSS47A8MTI9 375 aa8.6□□□□□ -1.03
SMN2-203ENST00000380743 M0R2N4 97 aa8.6□□□□□ -1.03
SMN2-203ENST00000380743 NIT1Q86X76 327 aa8.6□□□□□ -1.03
SMN2-203ENST00000380743 CHCHD5Q9BSY4 110 aa8.6□□□□□ -1.03
SMN2-203ENST00000380743 KRTAP1-5Q9BYS1 174 aa8.6□□□□□ -1.03
SMN2-203ENST00000380743 NBDYA0A0U1RRE5 68 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 AMTP48728 403 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 LINC01556Q5JQF7 62 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 MAP1LC3AQ9H492 121 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 TMEM262E9PQX1 116 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 GAGE6Q13070 117 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 Q6ZR54 194 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 CHCHD7Q9BUK0 85 aa8.59□□□□□ -1.03
SMN2-203ENST00000380743 FAT2Q9NYQ8 4349 aa8.58□□□□□ -1.04
SMN2-203ENST00000380743 TCAPO15273 167 aa8.58□□□□□ -1.04
SMN2-203ENST00000380743 ESDP10768 282 aa8.58□□□□□ -1.04
SMN2-203ENST00000380743 RAB5AP20339 215 aa8.58□□□□□ -1.04
SMN2-203ENST00000380743 FCER1GP30273 86 aa8.58□□□□□ -1.04
SMN2-203ENST00000380743 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
SMN2-203ENST00000380743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
SMN2-203ENST00000380743 A0A087WX48 190 aa8.57□□□□□ -1.04
SMN2-203ENST00000380743 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
SMN2-203ENST00000380743 IFI27P40305 119 aaPredicted RBP8.57□□□□□ -1.04
SMN2-203ENST00000380743 MPV17L2Q567V2 206 aa8.57□□□□□ -1.04
SMN2-203ENST00000380743 Q8N8P6 123 aa8.57□□□□□ -1.04
SMN2-203ENST00000380743 TRAV9-2A0A087WT02 112 aa8.56□□□□□ -1.04
SMN2-203ENST00000380743 TRGC2P03986 189 aa8.56□□□□□ -1.04
SMN2-203ENST00000380743 Q8N976 141 aa8.56□□□□□ -1.04
SMN2-203ENST00000380743 K7EP13 123 aa8.55□□□□□ -1.04
SMN2-203ENST00000380743 UBE2L6O14933 153 aa8.55□□□□□ -1.04
SMN2-203ENST00000380743 RBX1P62877 108 aa8.55□□□□□ -1.04
SMN2-203ENST00000380743 TTC32Q5I0X7 151 aa8.55□□□□□ -1.04
SMN2-203ENST00000380743 NXT2Q9NPJ8 142 aaKnown RBP8.55□□□□□ -1.04
SMN2-203ENST00000380743 PKIAP61925 76 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 C18orf32Q8TCD1 76 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 A0A1B0GUV1 79 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 H7C423 109 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 FGF6P10767 208 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 C10orf126Q8N4M7 172 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 KLK12Q9UKR0 248 aa8.54□□□□□ -1.04
SMN2-203ENST00000380743 IGLV4-60A0A075B6I1 120 aa8.53□□□□□ -1.04
SMN2-203ENST00000380743 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
SMN2-203ENST00000380743 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
SMN2-203ENST00000380743 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
SMN2-203ENST00000380743 HECTD4Q9Y4D8 3996 aa8.52□□□□□ -1.05
SMN2-203ENST00000380743 ANGP03950 147 aaKnown RBP8.52□□□□□ -1.05
SMN2-203ENST00000380743 LAGE3Q14657 143 aa8.52□□□□□ -1.05
SMN2-203ENST00000380743 AMMECR1LQ6DCA0 310 aa8.52□□□□□ -1.05
SMN2-203ENST00000380743 RNASEKQ6P5S7 137 aaKnown RBP8.52□□□□□ -1.05
SMN2-203ENST00000380743 LINC01546A6NGU7 62 aa8.51□□□□□ -1.05
SMN2-203ENST00000380743 K7EMI3 77 aa8.51□□□□□ -1.05
SMN2-203ENST00000380743 ORMDL2Q53FV1 153 aa8.51□□□□□ -1.05
SMN2-203ENST00000380743 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
SMN2-203ENST00000380743 LINC00269Q8N2A0 174 aa8.51□□□□□ -1.05
SMN2-203ENST00000380743 URB1-AS1Q96HZ7 61 aa8.51□□□□□ -1.05
SMN2-203ENST00000380743 UBE2D4Q9Y2X8 147 aa8.51□□□□□ -1.05
SMN2-203ENST00000380743 PKD1P98161 4303 aa8.51□□□□□ -1.05
SMN2-203ENST00000380743 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
SMN2-203ENST00000380743 A6NJY4 79 aa8.5□□□□□ -1.05
SMN2-203ENST00000380743 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
SMN2-203ENST00000380743 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
SMN2-203ENST00000380743 MRPL52Q86TS9 123 aaKnown RBP8.5□□□□□ -1.05
SMN2-203ENST00000380743 C6orf223Q8N319 242 aa8.5□□□□□ -1.05
SMN2-203ENST00000380743 Q9HAA7 133 aa8.5□□□□□ -1.05
SMN2-203ENST00000380743 LINC00614P0C842 121 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms