RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 MAP1LC3AQ9H492 121 aa12.83□□□□□ -0.36
SMN2-202ENST00000380742 Q9H8V8 135 aa12.83□□□□□ -0.36
SMN2-202ENST00000380742 KMT2AQ03164 3969 aa12.83□□□□□ -0.36
SMN2-202ENST00000380742 IQCJQ1A5X6 159 aa12.82□□□□□ -0.36
SMN2-202ENST00000380742 IGLV2-18A0A075B6J9 118 aa12.81□□□□□ -0.36
SMN2-202ENST00000380742 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
SMN2-202ENST00000380742 IGHV1-24A0A0C4DH33 117 aa12.81□□□□□ -0.36
SMN2-202ENST00000380742 SIVA1O15304 175 aa12.81□□□□□ -0.36
SMN2-202ENST00000380742 TRGC2P03986 189 aa12.81□□□□□ -0.36
SMN2-202ENST00000380742 AMTP48728 403 aa12.81□□□□□ -0.36
SMN2-202ENST00000380742 KIR2DL4Q99706 377 aa12.81□□□□□ -0.36
SMN2-202ENST00000380742 CHCHD5Q9BSY4 110 aa12.8□□□□□ -0.36
SMN2-202ENST00000380742 CHCHD7Q9BUK0 85 aa12.8□□□□□ -0.36
SMN2-202ENST00000380742 TCAPO15273 167 aa12.79□□□□□ -0.36
SMN2-202ENST00000380742 IFI27P40305 119 aaPredicted RBP12.79□□□□□ -0.36
SMN2-202ENST00000380742 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
SMN2-202ENST00000380742 NIT1Q86X76 327 aa12.79□□□□□ -0.36
SMN2-202ENST00000380742 Q8N3U1 123 aa12.79□□□□□ -0.36
SMN2-202ENST00000380742 Q8N8P6 123 aa12.79□□□□□ -0.36
SMN2-202ENST00000380742 TMEM243Q9BU79 118 aa12.79□□□□□ -0.36
SMN2-202ENST00000380742 DNAH10OSP0CZ25 163 aa12.78□□□□□ -0.36
SMN2-202ENST00000380742 ESDP10768 282 aa12.78□□□□□ -0.36
SMN2-202ENST00000380742 FCER1GP30273 86 aa12.78□□□□□ -0.36
SMN2-202ENST00000380742 C18orf32Q8TCD1 76 aa12.78□□□□□ -0.36
SMN2-202ENST00000380742 RYR2Q92736 4967 aa12.77□□□□□ -0.36
SMN2-202ENST00000380742 GAGE6Q13070 117 aa12.77□□□□□ -0.37
SMN2-202ENST00000380742 NXT2Q9NPJ8 142 aaKnown RBP12.77□□□□□ -0.37
SMN2-202ENST00000380742 IGHV3-30P01768 117 aa12.76□□□□□ -0.37
SMN2-202ENST00000380742 IGHV3-33P01772 117 aa12.76□□□□□ -0.37
SMN2-202ENST00000380742 IGHV3-30-3P0DP02 117 aa12.76□□□□□ -0.37
SMN2-202ENST00000380742 IGHV3-30-5P0DP03 117 aa12.76□□□□□ -0.37
SMN2-202ENST00000380742 LINC01556Q5JQF7 62 aa12.76□□□□□ -0.37
SMN2-202ENST00000380742 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.75□□□□□ -0.37
SMN2-202ENST00000380742 IGKV2-29A2NJV5 120 aaPredicted RBP12.75□□□□□ -0.37
SMN2-202ENST00000380742 TMEM262E9PQX1 116 aa12.75□□□□□ -0.37
SMN2-202ENST00000380742 PRSS3P2Q8NHM4 247 aa12.75□□□□□ -0.37
SMN2-202ENST00000380742 MPV17L2Q567V2 206 aa12.74□□□□□ -0.37
SMN2-202ENST00000380742 KRTAP1-5Q9BYS1 174 aa12.74□□□□□ -0.37
SMN2-202ENST00000380742 NBDYA0A0U1RRE5 68 aa12.73□□□□□ -0.37
SMN2-202ENST00000380742 M0R2N4 97 aa12.73□□□□□ -0.37
SMN2-202ENST00000380742 UBE2L6O14933 153 aa12.73□□□□□ -0.37
SMN2-202ENST00000380742 A0A087WX48 190 aa12.72□□□□□ -0.37
SMN2-202ENST00000380742 Q8N976 141 aa12.72□□□□□ -0.37
SMN2-202ENST00000380742 C20orf203Q8NBC4 194 aa12.72□□□□□ -0.37
SMN2-202ENST00000380742 URB1-AS1Q96HZ7 61 aa12.72□□□□□ -0.37
SMN2-202ENST00000380742 LINC01546A6NGU7 62 aa12.71□□□□□ -0.37
SMN2-202ENST00000380742 H7C423 109 aa12.71□□□□□ -0.37
SMN2-202ENST00000380742 K7EMI3 77 aa12.71□□□□□ -0.37
SMN2-202ENST00000380742 PKIAP61925 76 aa12.71□□□□□ -0.37
SMN2-202ENST00000380742 RBX1P62877 108 aa12.71□□□□□ -0.37
SMN2-202ENST00000380742 Q6ZR54 194 aa12.71□□□□□ -0.37
SMN2-202ENST00000380742 DNAH2Q9P225 4427 aa12.71□□□□□ -0.37
SMN2-202ENST00000380742 FGF6P10767 208 aa12.7□□□□□ -0.38
SMN2-202ENST00000380742 RPL39P62891 51 aaKnown RBP12.7□□□□□ -0.38
SMN2-202ENST00000380742 LAGE3Q14657 143 aa12.7□□□□□ -0.38
SMN2-202ENST00000380742 IGLV4-60A0A075B6I1 120 aa12.69□□□□□ -0.38
SMN2-202ENST00000380742 A0A1B0GUV1 79 aa12.69□□□□□ -0.38
SMN2-202ENST00000380742 ORMDL2Q53FV1 153 aa12.69□□□□□ -0.38
SMN2-202ENST00000380742 FA2HQ7L5A8 372 aa12.69□□□□□ -0.38
SMN2-202ENST00000380742 TRAV9-2A0A087WT02 112 aa12.69□□□□□ -0.38
SMN2-202ENST00000380742 LINC00614P0C842 121 aa12.69□□□□□ -0.38
SMN2-202ENST00000380742 TTC32Q5I0X7 151 aa12.69□□□□□ -0.38
SMN2-202ENST00000380742 RYR3Q15413 4870 aa12.68□□□□□ -0.38
SMN2-202ENST00000380742 K7EP13 123 aa12.68□□□□□ -0.38
SMN2-202ENST00000380742 Q0VG73 95 aa12.68□□□□□ -0.38
SMN2-202ENST00000380742 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
SMN2-202ENST00000380742 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
SMN2-202ENST00000380742 MRPL52Q86TS9 123 aaKnown RBP12.68□□□□□ -0.38
SMN2-202ENST00000380742 KLK12Q9UKR0 248 aa12.68□□□□□ -0.38
SMN2-202ENST00000380742 UBE2D4Q9Y2X8 147 aa12.68□□□□□ -0.38
SMN2-202ENST00000380742 DNAH10Q8IVF4 4471 aa12.67□□□□□ -0.38
SMN2-202ENST00000380742 IBA57-AS1B1ANH7 110 aa12.67□□□□□ -0.38
SMN2-202ENST00000380742 ANGP03950 147 aaKnown RBP12.67□□□□□ -0.38
SMN2-202ENST00000380742 C10orf126Q8N4M7 172 aa12.67□□□□□ -0.38
SMN2-202ENST00000380742 TMEM18Q96B42 140 aa12.67□□□□□ -0.38
SMN2-202ENST00000380742 AP5S1Q9NUS5 200 aa12.67□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BKO60814 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BJP06899 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 ZNF25P17030 456 aaPredicted RBP12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BOP23527 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BBP33778 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BDP58876 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 RAB5BP61020 215 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BCP62807 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST2H2BEQ16778 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.66□□□□□ -0.38
SMN2-202ENST00000380742 C2orf66Q6UXQ4 117 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BHQ93079 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BNQ99877 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 HIST1H2BMQ99879 126 aa12.66□□□□□ -0.38
SMN2-202ENST00000380742 FRAS1Q86XX4 4008 aa12.65□□□□□ -0.38
SMN2-202ENST00000380742 BTF3P20290 206 aaKnown RBP12.65□□□□□ -0.38
SMN2-202ENST00000380742 BAGE3Q86Y29 109 aa12.65□□□□□ -0.38
SMN2-202ENST00000380742 TIMM21Q9BVV7 248 aa12.65□□□□□ -0.38
SMN2-202ENST00000380742 LINC00269Q8N2A0 174 aa12.64□□□□□ -0.39
SMN2-202ENST00000380742 CYSLTR1Q9Y271 337 aa12.64□□□□□ -0.39
SMN2-202ENST00000380742 LINC00310P59036 64 aa12.63□□□□□ -0.39
SMN2-202ENST00000380742 ENHOQ6UWT2 76 aa12.63□□□□□ -0.39
SMN2-202ENST00000380742 OR5A1Q8NGJ0 315 aa12.63□□□□□ -0.39
SMN2-202ENST00000380742 FAM104AQ969W3 186 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms