RNA–Protein interactions for RNA: ENST00000380568.7

GCOM1-201, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 1,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-201ENST00000380568 TMEM97Q5BJF2 176 aa13.63□□□□□ -0.23
GCOM1-201ENST00000380568 ZNRF2Q8NHG8 242 aa13.63□□□□□ -0.23
GCOM1-201ENST00000380568 PMCHL2Q9BQD1 86 aa13.63□□□□□ -0.23
GCOM1-201ENST00000380568 SPANXA1Q9NS26 97 aa13.63□□□□□ -0.23
GCOM1-201ENST00000380568 EMP1P54849 157 aa13.62□□□□□ -0.23
GCOM1-201ENST00000380568 UBE2D3P61077 147 aa13.62□□□□□ -0.23
GCOM1-201ENST00000380568 UBE2D2P62837 147 aa13.62□□□□□ -0.23
GCOM1-201ENST00000380568 SAMD5Q5TGI4 173 aa13.62□□□□□ -0.23
GCOM1-201ENST00000380568 CHTOPQ9Y3Y2 248 aaKnown RBP13.62□□□□□ -0.23
GCOM1-201ENST00000380568 NOTCH3Q9UM47 2321 aa13.62□□□□□ -0.23
GCOM1-201ENST00000380568 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
GCOM1-201ENST00000380568 FHL2Q14192 279 aa13.61□□□□□ -0.23
GCOM1-201ENST00000380568 Q8NAQ8 132 aa13.61□□□□□ -0.23
GCOM1-201ENST00000380568 GTSF1LQ9H1H1 148 aa13.61□□□□□ -0.23
GCOM1-201ENST00000380568 DKK2Q9UBU2 259 aa13.61□□□□□ -0.23
GCOM1-201ENST00000380568 IGHV4-28A0A0C4DH34 117 aa13.6□□□□□ -0.23
GCOM1-201ENST00000380568 TIMM21Q9BVV7 248 aa13.6□□□□□ -0.23
GCOM1-201ENST00000380568 MRPL35Q9NZE8 188 aaKnown RBP13.6□□□□□ -0.23
GCOM1-201ENST00000380568 RPL39P62891 51 aaKnown RBP13.59□□□□□ -0.23
GCOM1-201ENST00000380568 MAJINQ3KP22 176 aa13.59□□□□□ -0.23
GCOM1-201ENST00000380568 FAM222AQ5U5X8 452 aa13.59□□□□□ -0.23
GCOM1-201ENST00000380568 DEFB130BP0DP73 79 aa13.59□□□□□ -0.23
GCOM1-201ENST00000380568 DEFB130AP0DP74 79 aa13.59□□□□□ -0.23
GCOM1-201ENST00000380568 CHCHD7Q9BUK0 85 aa13.59□□□□□ -0.23
GCOM1-201ENST00000380568 PRSS29PA6NIE9 313 aa13.58□□□□□ -0.24
GCOM1-201ENST00000380568 H7C423 109 aa13.58□□□□□ -0.24
GCOM1-201ENST00000380568 SPART-AS1P0CW21 52 aa13.58□□□□□ -0.24
GCOM1-201ENST00000380568 SLC25A34Q6PIV7 304 aa13.58□□□□□ -0.24
GCOM1-201ENST00000380568 COX8AP10176 69 aa13.57□□□□□ -0.24
GCOM1-201ENST00000380568 CST9LQ9H4G1 147 aa13.57□□□□□ -0.24
GCOM1-201ENST00000380568 PRO0255Q9UI72 69 aa13.57□□□□□ -0.24
GCOM1-201ENST00000380568 HHLA3Q9XRX5 114 aa13.57□□□□□ -0.24
GCOM1-201ENST00000380568 HNRNPA3P51991 378 aaKnown RBP13.56□□□□□ -0.24
GCOM1-201ENST00000380568 DAD1P61803 113 aa13.56□□□□□ -0.24
GCOM1-201ENST00000380568 GAGE12JA6NER3 117 aa13.55□□□□□ -0.24
GCOM1-201ENST00000380568 DLEU1O43261 78 aa13.55□□□□□ -0.24
GCOM1-201ENST00000380568 LINC00694P0DN24 101 aa13.55□□□□□ -0.24
GCOM1-201ENST00000380568 MRPS36P82909 103 aaKnown RBP13.55□□□□□ -0.24
GCOM1-201ENST00000380568 GAGE1Q13065 139 aa13.55□□□□□ -0.24
GCOM1-201ENST00000380568 GAGE4Q13068 117 aa13.55□□□□□ -0.24
GCOM1-201ENST00000380568 GAGE5Q13069 117 aa13.55□□□□□ -0.24
GCOM1-201ENST00000380568 GAGE13Q4V321 117 aa13.55□□□□□ -0.24
GCOM1-201ENST00000380568 PHLDA1Q8WV24 401 aaPredicted RBP13.55□□□□□ -0.24
GCOM1-201ENST00000380568 MRPS16Q9Y3D3 137 aaKnown RBP13.55□□□□□ -0.24
GCOM1-201ENST00000380568 CSDC2Q9Y534 153 aaKnown RBP13.55□□□□□ -0.24
GCOM1-201ENST00000380568 VWFP04275 2813 aa13.55□□□□□ -0.24
GCOM1-201ENST00000380568 IGLV4-3A0A075B6K6 122 aa13.54□□□□□ -0.24
GCOM1-201ENST00000380568 G3V4G9 280 aa13.54□□□□□ -0.24
GCOM1-201ENST00000380568 LBHQ53QV2 105 aaPredicted RBP13.54□□□□□ -0.24
GCOM1-201ENST00000380568 VCX2Q9H322 139 aa13.54□□□□□ -0.24
GCOM1-201ENST00000380568 Q9UF83 564 aa13.54□□□□□ -0.24
GCOM1-201ENST00000380568 UBE2D4Q9Y2X8 147 aa13.54□□□□□ -0.24
GCOM1-201ENST00000380568 ATP5G1P05496 136 aa13.54□□□□□ -0.24
GCOM1-201ENST00000380568 ZC2HC1BQ5TFG8 222 aa13.54□□□□□ -0.24
GCOM1-201ENST00000380568 C14orf144Q96I85 54 aa13.54□□□□□ -0.24
GCOM1-201ENST00000380568 C11orf68Q9H3H3 251 aaKnown RBP13.54□□□□□ -0.24
GCOM1-201ENST00000380568 AMELXQ99217 191 aa13.53□□□□□ -0.24
GCOM1-201ENST00000380568 TRBV25-1A0A075B6N4 114 aa13.52□□□□□ -0.25
GCOM1-201ENST00000380568 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
GCOM1-201ENST00000380568 HERVK_113P61574 105 aa13.52□□□□□ -0.25
GCOM1-201ENST00000380568 ANKRD39Q53RE8 183 aa13.52□□□□□ -0.25
GCOM1-201ENST00000380568 NFE4Q86UQ8 179 aa13.52□□□□□ -0.25
GCOM1-201ENST00000380568 STPG4Q8N801 248 aa13.51□□□□□ -0.25
GCOM1-201ENST00000380568 C2orf88Q9BSF0 95 aa13.51□□□□□ -0.25
GCOM1-201ENST00000380568 TMEM243Q9BU79 118 aa13.51□□□□□ -0.25
GCOM1-201ENST00000380568 SIVA1O15304 175 aa13.5□□□□□ -0.25
GCOM1-201ENST00000380568 ZNF25P17030 456 aaPredicted RBP13.5□□□□□ -0.25
GCOM1-201ENST00000380568 KPRPQ5T749 579 aaPredicted RBP13.5□□□□□ -0.25
GCOM1-201ENST00000380568 FBN1P35555 2871 aaKnown RBP13.5□□□□□ -0.25
GCOM1-201ENST00000380568 IGLV4-69A0A075B6H9 119 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 C11orf86A6NJI1 115 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 M0R143 59 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 SH2D6Q7Z4S9 175 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 BOD1L2Q8IYS8 172 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 DEFB104AQ8WTQ1 72 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 TRAV26-1A0A087WT03 109 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 UBE2L6O14933 153 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 SBSPONQ8IVN8 264 aa13.49□□□□□ -0.25
GCOM1-201ENST00000380568 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.48□□□□□ -0.25
GCOM1-201ENST00000380568 IGKV2-29A2NJV5 120 aaPredicted RBP13.48□□□□□ -0.25
GCOM1-201ENST00000380568 PAX4O43316 350 aa13.48□□□□□ -0.25
GCOM1-201ENST00000380568 E9PLD3 99 aa13.47□□□□□ -0.25
GCOM1-201ENST00000380568 GYPEP15421 78 aa13.47□□□□□ -0.25
GCOM1-201ENST00000380568 NMUP48645 174 aa13.47□□□□□ -0.25
GCOM1-201ENST00000380568 NTM-AS1Q6ZSK4 140 aa13.47□□□□□ -0.25
GCOM1-201ENST00000380568 ATP6V0E2Q8NHE4 81 aa13.47□□□□□ -0.25
GCOM1-201ENST00000380568 MAST4O15021 2626 aa13.46□□□□□ -0.25
GCOM1-201ENST00000380568 TRBV6-8A0A0A6YYG3 113 aa13.46□□□□□ -0.25
GCOM1-201ENST00000380568 SEC11AP67812 179 aa13.46□□□□□ -0.25
GCOM1-201ENST00000380568 TMEM101Q96IK0 257 aa13.46□□□□□ -0.25
GCOM1-201ENST00000380568 LOC100131303A0A0U1RQF7 123 aa13.45□□□□□ -0.26
GCOM1-201ENST00000380568 FGF6P10767 208 aa13.45□□□□□ -0.26
GCOM1-201ENST00000380568 CHAC1Q9BUX1 264 aa13.45□□□□□ -0.26
GCOM1-201ENST00000380568 CTAG1AP78358 180 aa13.44□□□□□ -0.26
GCOM1-201ENST00000380568 AMMECR1LQ6DCA0 310 aa13.44□□□□□ -0.26
GCOM1-201ENST00000380568 CELA1Q9UNI1 258 aa13.44□□□□□ -0.26
GCOM1-201ENST00000380568 TINCRA0A1B0GVN0 87 aa13.44□□□□□ -0.26
GCOM1-201ENST00000380568 DEFB4AO15263 64 aa13.44□□□□□ -0.26
GCOM1-201ENST00000380568 OR5A1Q8NGJ0 315 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms