RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
SNCAIP-203ENST00000379538 TRAV41A0A0B4J266 112 aa10.28□□□□□ -0.76
SNCAIP-203ENST00000379538 J3QLI3 93 aa10.28□□□□□ -0.76
SNCAIP-203ENST00000379538 ODF3Q96PU9 254 aa10.28□□□□□ -0.76
SNCAIP-203ENST00000379538 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
SNCAIP-203ENST00000379538 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
SNCAIP-203ENST00000379538 EDN2P20800 178 aa10.28□□□□□ -0.76
SNCAIP-203ENST00000379538 TMEM262E9PQX1 116 aa10.27□□□□□ -0.76
SNCAIP-203ENST00000379538 C15orf53Q8NAA6 179 aa10.27□□□□□ -0.76
SNCAIP-203ENST00000379538 C2CD3Q4AC94 2353 aa10.27□□□□□ -0.77
SNCAIP-203ENST00000379538 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
SNCAIP-203ENST00000379538 TENM1Q9UKZ4 2725 aa10.27□□□□□ -0.77
SNCAIP-203ENST00000379538 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 GAGE7O76087 117 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 GAGE12FP0CL80 117 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 GAGE12GP0CL81 117 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 GAGE12IP0CL82 117 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 GAGE4Q13068 117 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 OR10J6PQ8NGY7 276 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 TRBV7-9A0A0J9YWB2 115 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 A8MZ25 164 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 PF4V1P10720 104 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 IFITM1P13164 125 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 ZNF876PQ49A33 203 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 Q6YL49 198 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 ESM1Q9NQ30 184 aa10.26□□□□□ -0.77
SNCAIP-203ENST00000379538 A0A0J9YXV3 536 aa10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 TRIAP1O43715 76 aa10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 IGHG2P01859 326 aa10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 PRSS2P07478 247 aa10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 C11orf44Q8N8P7 122 aa10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 EEF1AKMT3Q96AZ1 226 aa10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 DUX3Q96PT4 197 aa10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 U3KQE9 123 aa10.25□□□□□ -0.77
SNCAIP-203ENST00000379538 CYSRT1A8MQ03 144 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 IGKV3-20P01619 116 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 ATRQ13535 2644 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 MAST4O15021 2626 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 RPL32P62910 135 aaKnown RBP10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 CLEC2BQ92478 149 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 LINC00477Q96M19 166 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 SPXQ9BT56 116 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 NOTCH3Q9UM47 2321 aa10.24□□□□□ -0.77
SNCAIP-203ENST00000379538 TRAV8-3A0A0A6YYJ7 113 aa10.23□□□□□ -0.77
SNCAIP-203ENST00000379538 TRAV8-4A0A0B4J246 113 aa10.23□□□□□ -0.77
SNCAIP-203ENST00000379538 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
SNCAIP-203ENST00000379538 VWFP04275 2813 aa10.23□□□□□ -0.77
SNCAIP-203ENST00000379538 TRAV12-3A0A0B4J271 114 aa10.23□□□□□ -0.77
SNCAIP-203ENST00000379538 MRPL53Q96EL3 112 aaKnown RBP10.23□□□□□ -0.77
SNCAIP-203ENST00000379538 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
SNCAIP-203ENST00000379538 C19orf54Q5BKX5 351 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 ADAMTSL4-AS1Q5T5F5 129 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 CHCHD5Q9BSY4 110 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 VCYO14598 125 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 LY6G6DO95868 133 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 P0DMU3 169 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 FAM231AP0DMU4 169 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 FAM231CP0DMU5 169 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 C9orf139Q6ZV77 190 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 TRRAPQ9Y4A5 3859 aa10.22□□□□□ -0.77
SNCAIP-203ENST00000379538 TRAV12-2A0A075B6T6 113 aa10.21□□□□□ -0.77
SNCAIP-203ENST00000379538 ZNF22P17026 224 aaPredicted RBP10.21□□□□□ -0.77
SNCAIP-203ENST00000379538 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
SNCAIP-203ENST00000379538 C18orf65Q6ZTR6 163 aa10.21□□□□□ -0.77
SNCAIP-203ENST00000379538 MDFICQ9P1T7 246 aa10.21□□□□□ -0.77
SNCAIP-203ENST00000379538 SOCS3O14543 225 aa10.21□□□□□ -0.78
SNCAIP-203ENST00000379538 C2orf82Q6UX34 121 aa10.21□□□□□ -0.78
SNCAIP-203ENST00000379538 ATXN8Q156A1 80 aa10.21□□□□□ -0.78
SNCAIP-203ENST00000379538 ZNF56Q15929 161 aa10.21□□□□□ -0.78
SNCAIP-203ENST00000379538 DAND5Q8N907 189 aa10.21□□□□□ -0.78
SNCAIP-203ENST00000379538 IGHV4OR15-8A0A075B7B6 117 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 A0A087WW49 117 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 DNAJC9-AS1A6NH13 148 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 H7C423 109 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 TIMM17AQ99595 171 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 ZNF702PQ9H963 129 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 TRBV7-1A0A0A6YYK4 115 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
SNCAIP-203ENST00000379538 INAFM1C9JVW0 142 aa10.19□□□□□ -0.78
SNCAIP-203ENST00000379538 H3BMM0 161 aa10.19□□□□□ -0.78
SNCAIP-203ENST00000379538 LEPROTO15243 131 aa10.19□□□□□ -0.78
SNCAIP-203ENST00000379538 MEIG1Q5JSS6 88 aa10.19□□□□□ -0.78
SNCAIP-203ENST00000379538 UBE2WQ96B02 151 aa10.19□□□□□ -0.78
SNCAIP-203ENST00000379538 IGHV3-73A0A0B4J1V6 119 aa10.19□□□□□ -0.78
SNCAIP-203ENST00000379538 DEFB136Q30KP8 78 aa10.19□□□□□ -0.78
SNCAIP-203ENST00000379538 A0A0B4J2C4 111 aa10.18□□□□□ -0.78
SNCAIP-203ENST00000379538 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
SNCAIP-203ENST00000379538 LGALS9O00182 355 aa10.18□□□□□ -0.78
SNCAIP-203ENST00000379538 Q9UF83 564 aa10.18□□□□□ -0.78
SNCAIP-203ENST00000379538 KLK9Q9UKQ9 250 aa10.18□□□□□ -0.78
SNCAIP-203ENST00000379538 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
SNCAIP-203ENST00000379538 OVOL1O14753 267 aa10.18□□□□□ -0.78
SNCAIP-203ENST00000379538 BRI3O95415 125 aa10.18□□□□□ -0.78
SNCAIP-203ENST00000379538 IGHV3-30-3P0DP02 117 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms