RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 OSTCQ9NRP0 149 aa7.64□□□□□ -1.19
SMARCE1-203ENST00000377808 XGP55808 180 aa7.63□□□□□ -1.19
SMARCE1-203ENST00000377808 MIAQ16674 131 aa7.63□□□□□ -1.19
SMARCE1-203ENST00000377808 TMEM241Q24JQ0 296 aa7.63□□□□□ -1.19
SMARCE1-203ENST00000377808 FAM74A3Q4VXF1 159 aa7.63□□□□□ -1.19
SMARCE1-203ENST00000377808 A0A1B0GUT8 65 aa7.62□□□□□ -1.19
SMARCE1-203ENST00000377808 EPM2AB3EWF7 344 aa7.62□□□□□ -1.19
SMARCE1-203ENST00000377808 C9JQL5 133 aa7.62□□□□□ -1.19
SMARCE1-203ENST00000377808 RPL23P62829 140 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-203ENST00000377808 SRSF3P84103 164 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-203ENST00000377808 ISOC2Q96AB3 205 aa7.62□□□□□ -1.19
SMARCE1-203ENST00000377808 GFRA4Q9GZZ7 299 aa7.62□□□□□ -1.19
SMARCE1-203ENST00000377808 IGLV10-54A0A075B6I4 117 aa7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 APCSP02743 223 aa7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 SMR3BP02814 79 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 REG3AQ06141 175 aa7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 LINC01620Q4KN68 170 aa7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 C14orf177Q52M58 125 aa7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 FRZBQ92765 325 aa7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 NAT8Q9UHE5 227 aa7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 V9GYV3 84 aa7.61□□□□□ -1.19
SMARCE1-203ENST00000377808 IGLV4-60A0A075B6I1 120 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 IGKV3OR2-268A0A0C4DH90 116 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 PMCHP20382 165 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 RIGQ13278 110 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 AMMECR1LQ6DCA0 310 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 C20orf203Q8NBC4 194 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 TMEM70Q9BUB7 260 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 PRR34Q9NV39 138 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
SMARCE1-203ENST00000377808 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 IGKV2-29A2NJV5 120 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 FAM231BA6NCW3 169 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 SDHAF1A6NFY7 115 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 USP17L23D6RBM5 183 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 Q5VSD8 79 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 RNASEKQ6P5S7 137 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 AMN1Q8IY45 258 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 NUP35Q8NFH5 326 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 TMEM191AQ9H0A3 160 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 ST20Q9HBF5 79 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 FAM30AQ9NZY2 134 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 NAT8BQ9UHF3 227 aa7.59□□□□□ -1.19
SMARCE1-203ENST00000377808 I3L3M4 83 aa7.58□□□□□ -1.2
SMARCE1-203ENST00000377808 GAS8-AS1O95177 125 aa7.58□□□□□ -1.2
SMARCE1-203ENST00000377808 NCR2O95944 276 aa7.58□□□□□ -1.2
SMARCE1-203ENST00000377808 SMDT1Q9H4I9 107 aa7.58□□□□□ -1.2
SMARCE1-203ENST00000377808 FAT1Q14517 4588 aa7.58□□□□□ -1.2
SMARCE1-203ENST00000377808 A0A1B0GUV1 79 aa7.57□□□□□ -1.2
SMARCE1-203ENST00000377808 SMKR1H3BMG3 65 aa7.57□□□□□ -1.2
SMARCE1-203ENST00000377808 J3QL48 77 aa7.57□□□□□ -1.2
SMARCE1-203ENST00000377808 RAB4AP20338 218 aa7.57□□□□□ -1.2
SMARCE1-203ENST00000377808 RAB14P61106 215 aa7.57□□□□□ -1.2
SMARCE1-203ENST00000377808 RNF185Q96GF1 192 aa7.57□□□□□ -1.2
SMARCE1-203ENST00000377808 TMEM242Q9NWH2 141 aa7.57□□□□□ -1.2
SMARCE1-203ENST00000377808 TRAV8-4A0A0B4J246 113 aa7.56□□□□□ -1.2
SMARCE1-203ENST00000377808 FAM229AH3BQW9 127 aa7.56□□□□□ -1.2
SMARCE1-203ENST00000377808 RPS10P46783 165 aaKnown RBP7.56□□□□□ -1.2
SMARCE1-203ENST00000377808 CAMPP49913 170 aa7.56□□□□□ -1.2
SMARCE1-203ENST00000377808 MRAP2Q96G30 205 aa7.56□□□□□ -1.2
SMARCE1-203ENST00000377808 TRBV6-5A0A0K0K1A5 114 aa7.55□□□□□ -1.2
SMARCE1-203ENST00000377808 FGF6P10767 208 aa7.55□□□□□ -1.2
SMARCE1-203ENST00000377808 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1-203ENST00000377808 TMEM101Q96IK0 257 aa7.55□□□□□ -1.2
SMARCE1-203ENST00000377808 BTF3L4Q96K17 158 aa7.55□□□□□ -1.2
SMARCE1-203ENST00000377808 SMIM27A0A1W2PRY6 76 aa7.54□□□□□ -1.2
SMARCE1-203ENST00000377808 hDV102S1A0JD36 115 aa7.54□□□□□ -1.2
SMARCE1-203ENST00000377808 PRSS1P07477 247 aa7.54□□□□□ -1.2
SMARCE1-203ENST00000377808 INAFM2P0DMQ5 153 aa7.54□□□□□ -1.2
SMARCE1-203ENST00000377808 FCER1GP30273 86 aa7.54□□□□□ -1.2
SMARCE1-203ENST00000377808 MRPL54Q6P161 138 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-203ENST00000377808 GAGE12HA6NDE8 117 aa7.53□□□□□ -1.2
SMARCE1-203ENST00000377808 H7C423 109 aa7.53□□□□□ -1.2
SMARCE1-203ENST00000377808 TSHBP01222 138 aa7.53□□□□□ -1.2
SMARCE1-203ENST00000377808 KRTAP26-1Q6PEX3 210 aa7.53□□□□□ -1.2
SMARCE1-203ENST00000377808 PPP1R17O96001 155 aa7.52□□□□□ -1.2
SMARCE1-203ENST00000377808 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.2
SMARCE1-203ENST00000377808 Q6ZSA8 131 aa7.52□□□□□ -1.2
SMARCE1-203ENST00000377808 SCXQ7RTU7 201 aa7.52□□□□□ -1.2
SMARCE1-203ENST00000377808 CLRN3Q8NCR9 226 aa7.52□□□□□ -1.2
SMARCE1-203ENST00000377808 OR5A1Q8NGJ0 315 aa7.52□□□□□ -1.2
SMARCE1-203ENST00000377808 AP5S1Q9NUS5 200 aa7.52□□□□□ -1.2
SMARCE1-203ENST00000377808 A0A1B0GW15 77 aa7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 C7orf77A4D0Y5 90 aa7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 VCYO14598 125 aa7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 S100A8P05109 93 aa7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 ZNF25P17030 456 aaPredicted RBP7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 CKS2P33552 79 aa7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 HBBP68871 147 aa7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 FAM104BQ5XKR9 115 aa7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 LINC00528Q8N1L1 170 aa7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.21
SMARCE1-203ENST00000377808 VPS13BQ7Z7G8 4022 aa7.51□□□□□ -1.21
SMARCE1-203ENST00000377808 TRBV27A0A0K0K1C4 114 aa7.51□□□□□ -1.21
SMARCE1-203ENST00000377808 F8W036 122 aa7.51□□□□□ -1.21
SMARCE1-203ENST00000377808 PPP1R2P9O14990 202 aa7.51□□□□□ -1.21
SMARCE1-203ENST00000377808 ESDP10768 282 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms