RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 FAM236BA0A1B0GV22 79 aa10.19□□□□□ -0.78
SF1-205ENST00000377394 K7EQG2 157 aa10.19□□□□□ -0.78
SF1-205ENST00000377394 M0QY20 66 aa10.19□□□□□ -0.78
SF1-205ENST00000377394 DEFB112Q30KQ8 113 aa10.19□□□□□ -0.78
SF1-205ENST00000377394 FAM74A4Q5TZK3 123 aa10.19□□□□□ -0.78
SF1-205ENST00000377394 CFAP46Q8IYW2 2715 aa10.19□□□□□ -0.78
SF1-205ENST00000377394 KLK5Q9Y337 293 aaPredicted RBP10.19□□□□□ -0.78
SF1-205ENST00000377394 TRGV11A0A075B6L2 103 aa10.18□□□□□ -0.78
SF1-205ENST00000377394 TMEM126AQ9H061 195 aa10.18□□□□□ -0.78
SF1-205ENST00000377394 NPC2P61916 151 aa10.18□□□□□ -0.78
SF1-205ENST00000377394 CSPG4Q6UVK1 2322 aa10.18□□□□□ -0.78
SF1-205ENST00000377394 TRBV30A0A0K0K1B3 111 aa10.17□□□□□ -0.78
SF1-205ENST00000377394 PRSS2P07478 247 aa10.17□□□□□ -0.78
SF1-205ENST00000377394 SNRPD3P62318 126 aaKnown RBP10.17□□□□□ -0.78
SF1-205ENST00000377394 ZNF256Q9Y2P7 627 aaPredicted RBP10.17□□□□□ -0.78
SF1-205ENST00000377394 CSDC2Q9Y534 153 aaKnown RBP10.17□□□□□ -0.78
SF1-205ENST00000377394 TMEM223A0PJW6 202 aa10.17□□□□□ -0.78
SF1-205ENST00000377394 TMEM89A2RUT3 159 aa10.17□□□□□ -0.78
SF1-205ENST00000377394 PKD1L2Q7Z442 2459 aa10.17□□□□□ -0.78
SF1-205ENST00000377394 IGHV1OR15-1A0A075B7D0 117 aa10.16□□□□□ -0.78
SF1-205ENST00000377394 LEPROTO15243 131 aa10.16□□□□□ -0.78
SF1-205ENST00000377394 SPINK13Q1W4C9 94 aa10.16□□□□□ -0.78
SF1-205ENST00000377394 CRYBG3Q68DQ2 2970 aa10.16□□□□□ -0.78
SF1-205ENST00000377394 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
SF1-205ENST00000377394 MRPL23Q16540 153 aaKnown RBP10.16□□□□□ -0.78
SF1-205ENST00000377394 NRGNQ92686 78 aa10.16□□□□□ -0.78
SF1-205ENST00000377394 ICOSQ9Y6W8 199 aa10.16□□□□□ -0.78
SF1-205ENST00000377394 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
SF1-205ENST00000377394 NSUN5P1Q3KNT7 163 aa10.16□□□□□ -0.78
SF1-205ENST00000377394 A0A0J9YXY3 114 aa10.15□□□□□ -0.78
SF1-205ENST00000377394 TRBV7-7A0A0K0K1E9 115 aa10.15□□□□□ -0.78
SF1-205ENST00000377394 M0R2P5 195 aa10.15□□□□□ -0.78
SF1-205ENST00000377394 SYNJ2BPP57105 145 aa10.15□□□□□ -0.78
SF1-205ENST00000377394 CSMD2Q7Z408 3487 aa10.15□□□□□ -0.79
SF1-205ENST00000377394 A0A0J9YXV3 536 aa10.15□□□□□ -0.79
SF1-205ENST00000377394 RHOHQ15669 191 aa10.15□□□□□ -0.79
SF1-205ENST00000377394 SPANXA1Q9NS26 97 aa10.15□□□□□ -0.79
SF1-205ENST00000377394 DOPEY1Q5JWR5 2465 aa10.15□□□□□ -0.79
SF1-205ENST00000377394 FLNCQ14315 2725 aa10.14□□□□□ -0.79
SF1-205ENST00000377394 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
SF1-205ENST00000377394 C9orf153Q5TBE3 101 aa10.14□□□□□ -0.79
SF1-205ENST00000377394 RNF152Q8N8N0 203 aa10.14□□□□□ -0.79
SF1-205ENST00000377394 TRAV8-3A0A0A6YYJ7 113 aa10.13□□□□□ -0.79
SF1-205ENST00000377394 TMEM101Q96IK0 257 aa10.13□□□□□ -0.79
SF1-205ENST00000377394 DUX5Q96PT3 197 aa10.13□□□□□ -0.79
SF1-205ENST00000377394 USP9XQ93008 2570 aaPredicted RBP10.13□□□□□ -0.79
SF1-205ENST00000377394 DSCR9P59020 149 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 C20orf203Q8NBC4 194 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 SMCR5Q8TEV8 140 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 LITAFQ99732 161 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 A0A096LNT2 108 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 H3BT86 120 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 SPXQ9BT56 116 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 NDUFA7O95182 113 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 RBMY1A1P0DJD3 496 aaKnown RBP10.12□□□□□ -0.79
SF1-205ENST00000377394 RBMY1CP0DJD4 496 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 HERVK_113P63121 156 aa10.12□□□□□ -0.79
SF1-205ENST00000377394 RBMY1FQ15415 496 aaKnown RBP10.12□□□□□ -0.79
SF1-205ENST00000377394 PRRC2AP48634 2157 aaKnown RBP10.11□□□□□ -0.79
SF1-205ENST00000377394 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
SF1-205ENST00000377394 HOXD3P31249 432 aaPredicted RBP10.11□□□□□ -0.79
SF1-205ENST00000377394 A8MZ25 164 aa10.11□□□□□ -0.79
SF1-205ENST00000377394 I3L3M4 83 aa10.11□□□□□ -0.79
SF1-205ENST00000377394 C3orf22Q8N5N4 141 aa10.1□□□□□ -0.79
SF1-205ENST00000377394 LST1O00453 97 aa10.1□□□□□ -0.79
SF1-205ENST00000377394 IGHV3-30-3P0DP02 117 aa10.1□□□□□ -0.79
SF1-205ENST00000377394 DEFB121Q5J5C9 76 aa10.1□□□□□ -0.79
SF1-205ENST00000377394 UTP20O75691 2785 aaKnown RBP10.09□□□□□ -0.79
SF1-205ENST00000377394 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
SF1-205ENST00000377394 DOPEY2Q9Y3R5 2298 aa10.09□□□□□ -0.79
SF1-205ENST00000377394 SORL1Q92673 2214 aa10.09□□□□□ -0.79
SF1-205ENST00000377394 IGLV4-3A0A075B6K6 122 aa10.09□□□□□ -0.79
SF1-205ENST00000377394 MAPK1IP1LQ8NDC0 245 aa10.09□□□□□ -0.79
SF1-205ENST00000377394 UBE2E2Q96LR5 201 aa10.09□□□□□ -0.79
SF1-205ENST00000377394 J3QLI3 93 aa10.08□□□□□ -0.8
SF1-205ENST00000377394 COX6CP09669 75 aa10.08□□□□□ -0.8
SF1-205ENST00000377394 FAM19A5Q7Z5A7 132 aaPredicted RBP10.08□□□□□ -0.8
SF1-205ENST00000377394 DAND5Q8N907 189 aa10.08□□□□□ -0.8
SF1-205ENST00000377394 FAM104AQ969W3 186 aa10.08□□□□□ -0.8
SF1-205ENST00000377394 EDA2RQ9HAV5 297 aa10.08□□□□□ -0.8
SF1-205ENST00000377394 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
SF1-205ENST00000377394 ZANQ9Y493 2812 aa10.07□□□□□ -0.8
SF1-205ENST00000377394 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
SF1-205ENST00000377394 IGSF10Q6WRI0 2623 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 PIEZO1Q92508 2521 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 FSHBP01225 129 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 PROK1P58294 105 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 C5orf47Q569G3 176 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 Q6YL49 198 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 USP9YO00507 2555 aaPredicted RBP10.06□□□□□ -0.8
SF1-205ENST00000377394 IGHV3-73A0A0B4J1V6 119 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 SMIM9A6NGZ8 99 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 A8MTW9 85 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 C18orf65Q6ZTR6 163 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 TIMM21Q9BVV7 248 aa10.06□□□□□ -0.8
SF1-205ENST00000377394 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
SF1-205ENST00000377394 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
SF1-205ENST00000377394 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms