RNA–Protein interactions for RNA: ENST00000376800.7

HCG9-201, Transcript of HLA complex group 9, humanhuman

TSL 1 (best) BASIC

Gene HCG9, Length 663 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG9-201ENST00000376800 RPL39LQ96EH5 51 aaKnown RBP8.74□□□□□ -1.01
HCG9-201ENST00000376800 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
HCG9-201ENST00000376800 F2Z2F3 143 aa8.73□□□□□ -1.01
HCG9-201ENST00000376800 CEBPGP53567 150 aa8.73□□□□□ -1.01
HCG9-201ENST00000376800 PKIAP61925 76 aa8.73□□□□□ -1.01
HCG9-201ENST00000376800 C14orf177Q52M58 125 aa8.73□□□□□ -1.01
HCG9-201ENST00000376800 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
HCG9-201ENST00000376800 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.73□□□□□ -1.01
HCG9-201ENST00000376800 CNFNQ9BYD5 112 aa8.72□□□□□ -1.01
HCG9-201ENST00000376800 IGKV3OR2-268A0A0C4DH90 116 aa8.71□□□□□ -1.02
HCG9-201ENST00000376800 J3QL48 77 aa8.71□□□□□ -1.02
HCG9-201ENST00000376800 GAS8-AS1O95177 125 aa8.71□□□□□ -1.02
HCG9-201ENST00000376800 AMTP48728 403 aa8.71□□□□□ -1.02
HCG9-201ENST00000376800 BIN3Q9NQY0 253 aa8.71□□□□□ -1.02
HCG9-201ENST00000376800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.7□□□□□ -1.02
HCG9-201ENST00000376800 IGKV2-29A2NJV5 120 aaPredicted RBP8.7□□□□□ -1.02
HCG9-201ENST00000376800 GATCO43716 136 aaKnown RBP8.7□□□□□ -1.02
HCG9-201ENST00000376800 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
HCG9-201ENST00000376800 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
HCG9-201ENST00000376800 UBE2L6O14933 153 aa8.69□□□□□ -1.02
HCG9-201ENST00000376800 SLPIP03973 132 aa8.69□□□□□ -1.02
HCG9-201ENST00000376800 COTL1Q14019 142 aa8.69□□□□□ -1.02
HCG9-201ENST00000376800 WDR73Q6P4I2 378 aa8.69□□□□□ -1.02
HCG9-201ENST00000376800 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
HCG9-201ENST00000376800 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
HCG9-201ENST00000376800 A0A1B0GVG6 124 aa8.68□□□□□ -1.02
HCG9-201ENST00000376800 hDV102S1A0JD36 115 aa8.68□□□□□ -1.02
HCG9-201ENST00000376800 TAGLN2P37802 199 aaKnown RBP8.68□□□□□ -1.02
HCG9-201ENST00000376800 LYPD6BQ8NI32 183 aa8.68□□□□□ -1.02
HCG9-201ENST00000376800 TMEM250H0YL14 139 aa8.67□□□□□ -1.02
HCG9-201ENST00000376800 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
HCG9-201ENST00000376800 BLOC1S1P78537 153 aa8.67□□□□□ -1.02
HCG9-201ENST00000376800 C15orf56Q8N910 161 aa8.67□□□□□ -1.02
HCG9-201ENST00000376800 GAGE12HA6NDE8 117 aa8.66□□□□□ -1.02
HCG9-201ENST00000376800 KRTAP29-1A8MX34 341 aaPredicted RBP8.66□□□□□ -1.02
HCG9-201ENST00000376800 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
HCG9-201ENST00000376800 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
HCG9-201ENST00000376800 FAM231DQ6ZW35 169 aa8.66□□□□□ -1.02
HCG9-201ENST00000376800 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
HCG9-201ENST00000376800 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
HCG9-201ENST00000376800 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.02
HCG9-201ENST00000376800 SMIM7Q9BQ49 75 aa8.65□□□□□ -1.02
HCG9-201ENST00000376800 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
HCG9-201ENST00000376800 APCSP02743 223 aa8.64□□□□□ -1.03
HCG9-201ENST00000376800 RPS10P46783 165 aaKnown RBP8.64□□□□□ -1.03
HCG9-201ENST00000376800 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
HCG9-201ENST00000376800 RNASEKQ6P5S7 137 aaKnown RBP8.64□□□□□ -1.03
HCG9-201ENST00000376800 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
HCG9-201ENST00000376800 EIF5A2Q9GZV4 153 aaKnown RBP8.64□□□□□ -1.03
HCG9-201ENST00000376800 TMEM242Q9NWH2 141 aa8.64□□□□□ -1.03
HCG9-201ENST00000376800 FAM231BA6NCW3 169 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 A8MWL6 223 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 SMKR1H3BMG3 65 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 SRP19P09132 144 aaKnown RBP8.63□□□□□ -1.03
HCG9-201ENST00000376800 FGF6P10767 208 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 SMIM15Q7Z3B0 74 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 CLRN3Q8NCR9 226 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 RNF185Q96GF1 192 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 FAM210AQ96ND0 272 aa8.63□□□□□ -1.03
HCG9-201ENST00000376800 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
HCG9-201ENST00000376800 NCR2O95944 276 aa8.62□□□□□ -1.03
HCG9-201ENST00000376800 TSHBP01222 138 aa8.62□□□□□ -1.03
HCG9-201ENST00000376800 CHCHD10Q8WYQ3 142 aaPredicted RBP8.62□□□□□ -1.03
HCG9-201ENST00000376800 UBR4Q5T4S7 5183 aa8.62□□□□□ -1.03
HCG9-201ENST00000376800 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
HCG9-201ENST00000376800 PMCHP20382 165 aa8.61□□□□□ -1.03
HCG9-201ENST00000376800 CT83Q5H943 113 aa8.61□□□□□ -1.03
HCG9-201ENST00000376800 AMN1Q8IY45 258 aa8.61□□□□□ -1.03
HCG9-201ENST00000376800 TNXBP22105 4242 aa8.6□□□□□ -1.03
HCG9-201ENST00000376800 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
HCG9-201ENST00000376800 C9JQL5 133 aa8.6□□□□□ -1.03
HCG9-201ENST00000376800 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
HCG9-201ENST00000376800 TSKUQ8WUA8 353 aa8.6□□□□□ -1.03
HCG9-201ENST00000376800 LINC00526Q96FQ7 95 aa8.6□□□□□ -1.03
HCG9-201ENST00000376800 AP5S1Q9NUS5 200 aa8.6□□□□□ -1.03
HCG9-201ENST00000376800 V9GYV3 84 aa8.6□□□□□ -1.03
HCG9-201ENST00000376800 A0A087WYN8 130 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 TRBV6-5A0A0K0K1A5 114 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 A0A1B0GUT8 65 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 I3L3M4 83 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 RAB4AP20338 218 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 SRSF3P84103 164 aaKnown RBP8.59□□□□□ -1.03
HCG9-201ENST00000376800 FOXI1Q12951 378 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 SPACA4Q8TDM5 124 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 BORCS7Q96B45 105 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 TMEM191AQ9H0A3 160 aa8.59□□□□□ -1.03
HCG9-201ENST00000376800 ESDP10768 282 aa8.58□□□□□ -1.04
HCG9-201ENST00000376800 XCL1P47992 114 aa8.58□□□□□ -1.04
HCG9-201ENST00000376800 COX6A2Q02221 97 aa8.58□□□□□ -1.04
HCG9-201ENST00000376800 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
HCG9-201ENST00000376800 PRSS3P2Q8NHM4 247 aa8.58□□□□□ -1.04
HCG9-201ENST00000376800 ST20Q9HBF5 79 aa8.58□□□□□ -1.04
HCG9-201ENST00000376800 OSTCQ9NRP0 149 aa8.58□□□□□ -1.04
HCG9-201ENST00000376800 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
HCG9-201ENST00000376800 IGKV2-24A0A0C4DH68 120 aa8.57□□□□□ -1.04
HCG9-201ENST00000376800 CCL25O15444 150 aa8.57□□□□□ -1.04
HCG9-201ENST00000376800 POLR2KP53803 58 aaKnown RBP8.57□□□□□ -1.04
HCG9-201ENST00000376800 RPL23P62829 140 aaKnown RBP8.57□□□□□ -1.04
HCG9-201ENST00000376800 TEX261Q6UWH6 196 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms