RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ADARB2-AS1A8MUL3 147 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 K7EP13 123 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 HERVK_113P61574 105 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 CLUHP3Q96NS8 147 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 LINC00467Q9BRT7 94 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 SPXQ9BT56 116 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 IGLV4-69A0A075B6H9 119 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 P0DMU3 169 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 FAM231AP0DMU4 169 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 FAM231CP0DMU5 169 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 C20orf203Q8NBC4 194 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 TM2D2Q9BX73 214 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 GAGE10A6NGK3 116 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 SAP30O75446 220 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 TAL2Q16559 108 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 TMEM170BQ5T4T1 132 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 CFAP126Q5VTH2 177 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 C11orf72Q8NBR9 251 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 PTH2Q96A98 100 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 NAA38Q9BRA0 125 aaKnown RBP8.78□□□□□ -1
HMGCL-202ENST00000374487 EDA2RQ9HAV5 297 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 NBEAL1Q6ZS30 2694 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 ZNF815PA8K554 130 aa8.78□□□□□ -1
HMGCL-202ENST00000374487 OPRPNQ99935 248 aaPredicted RBP8.78□□□□□ -1
HMGCL-202ENST00000374487 MRPL16Q9NX20 251 aaKnown RBP8.78□□□□□ -1
HMGCL-202ENST00000374487 RHODO00212 210 aa8.77□□□□□ -1.01
HMGCL-202ENST00000374487 UFSP1Q6NVU6 142 aa8.77□□□□□ -1.01
HMGCL-202ENST00000374487 SCGB1D4Q6XE38 83 aa8.77□□□□□ -1.01
HMGCL-202ENST00000374487 GTF2H5Q6ZYL4 71 aa8.77□□□□□ -1.01
HMGCL-202ENST00000374487 NHP2Q9NX24 153 aaKnown RBP8.77□□□□□ -1.01
HMGCL-202ENST00000374487 FBN3Q75N90 2809 aa8.77□□□□□ -1.01
HMGCL-202ENST00000374487 WNK1Q9H4A3 2382 aa8.76□□□□□ -1.01
HMGCL-202ENST00000374487 VCX2Q9H322 139 aa8.76□□□□□ -1.01
HMGCL-202ENST00000374487 AZU1P20160 251 aa8.76□□□□□ -1.01
HMGCL-202ENST00000374487 CMC4P56277 68 aaPredicted RBP8.76□□□□□ -1.01
HMGCL-202ENST00000374487 K7ERJ3 54 aa8.75□□□□□ -1.01
HMGCL-202ENST00000374487 Q6ZSN1 163 aa8.75□□□□□ -1.01
HMGCL-202ENST00000374487 ZNRF2Q8NHG8 242 aa8.75□□□□□ -1.01
HMGCL-202ENST00000374487 A0A1W2PPM0 123 aa8.75□□□□□ -1.01
HMGCL-202ENST00000374487 BEAN1Q3B7T3 259 aa8.75□□□□□ -1.01
HMGCL-202ENST00000374487 SAMD5Q5TGI4 173 aa8.75□□□□□ -1.01
HMGCL-202ENST00000374487 C1orf158Q8N1D5 194 aa8.75□□□□□ -1.01
HMGCL-202ENST00000374487 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
HMGCL-202ENST00000374487 FABP2P12104 132 aa8.74□□□□□ -1.01
HMGCL-202ENST00000374487 Q9UF83 564 aa8.74□□□□□ -1.01
HMGCL-202ENST00000374487 MGAM2Q2M2H8 2515 aa8.74□□□□□ -1.01
HMGCL-202ENST00000374487 IGLV4-3A0A075B6K6 122 aa8.73□□□□□ -1.01
HMGCL-202ENST00000374487 TRGV1A0A0A0MS02 117 aa8.73□□□□□ -1.01
HMGCL-202ENST00000374487 RS1O15537 224 aa8.73□□□□□ -1.01
HMGCL-202ENST00000374487 SRSF9Q13242 221 aaKnown RBP eCLIP8.73□□□□□ -1.01
HMGCL-202ENST00000374487 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
HMGCL-202ENST00000374487 GAGE12BA1L429 117 aa8.73□□□□□ -1.01
HMGCL-202ENST00000374487 NFE4Q86UQ8 179 aa8.73□□□□□ -1.01
HMGCL-202ENST00000374487 DNAJC30Q96LL9 226 aa8.73□□□□□ -1.01
HMGCL-202ENST00000374487 PYGO1Q9Y3Y4 419 aa8.73□□□□□ -1.01
HMGCL-202ENST00000374487 K7EP34 96 aa8.72□□□□□ -1.01
HMGCL-202ENST00000374487 SPCS1Q9Y6A9 102 aa8.72□□□□□ -1.01
HMGCL-202ENST00000374487 IGLV1-51P01701 117 aa8.72□□□□□ -1.01
HMGCL-202ENST00000374487 C12orf74Q32Q52 190 aa8.72□□□□□ -1.01
HMGCL-202ENST00000374487 NDUFA11Q86Y39 141 aa8.72□□□□□ -1.01
HMGCL-202ENST00000374487 PLEKHB2Q96CS7 222 aa8.72□□□□□ -1.01
HMGCL-202ENST00000374487 A0A0J9YXV3 536 aa8.71□□□□□ -1.01
HMGCL-202ENST00000374487 J3QQQ9 107 aa8.71□□□□□ -1.01
HMGCL-202ENST00000374487 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.01
HMGCL-202ENST00000374487 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.01
HMGCL-202ENST00000374487 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.02
HMGCL-202ENST00000374487 COTL1Q14019 142 aa8.71□□□□□ -1.02
HMGCL-202ENST00000374487 CEMP1Q6PRD7 247 aaPredicted RBP8.71□□□□□ -1.02
HMGCL-202ENST00000374487 RNASE8Q8TDE3 154 aaKnown RBP8.71□□□□□ -1.02
HMGCL-202ENST00000374487 TMEM263Q8WUH6 116 aaKnown RBP8.71□□□□□ -1.02
HMGCL-202ENST00000374487 TMEM238LA0A1B0GVL6 79 aa8.7□□□□□ -1.02
HMGCL-202ENST00000374487 A6NJY4 79 aa8.7□□□□□ -1.02
HMGCL-202ENST00000374487 TMEM223A0PJW6 202 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 RPL35AP18077 110 aaKnown RBP8.69□□□□□ -1.02
HMGCL-202ENST00000374487 CRYBA4P53673 196 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 TSPEAR-AS2P59090 65 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 OR5A1Q8NGJ0 315 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 SPANXA1Q9NS26 97 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.69□□□□□ -1.02
HMGCL-202ENST00000374487 IGKV2-29A2NJV5 120 aaPredicted RBP8.69□□□□□ -1.02
HMGCL-202ENST00000374487 G3V4G9 280 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 ZNF22P17026 224 aaPredicted RBP8.69□□□□□ -1.02
HMGCL-202ENST00000374487 OXLD1Q5BKU9 147 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 Q6ZTI0 123 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 AMELXQ99217 191 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 FAM110AQ9BQ89 295 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 CHCHD7Q9BUK0 85 aa8.69□□□□□ -1.02
HMGCL-202ENST00000374487 A0A0J9YY99 117 aa8.68□□□□□ -1.02
HMGCL-202ENST00000374487 IGLL5B9A064 214 aa8.68□□□□□ -1.02
HMGCL-202ENST00000374487 LEPROTO15243 131 aa8.68□□□□□ -1.02
HMGCL-202ENST00000374487 PRB2P02812 416 aaPredicted RBP8.68□□□□□ -1.02
HMGCL-202ENST00000374487 RNASE13Q5GAN3 156 aaKnown RBP8.68□□□□□ -1.02
HMGCL-202ENST00000374487 ZNF479Q96JC4 524 aa8.68□□□□□ -1.02
HMGCL-202ENST00000374487 C1QTNF4Q9BXJ3 329 aa8.68□□□□□ -1.02
HMGCL-202ENST00000374487 MEGF8Q7Z7M0 2845 aa8.68□□□□□ -1.02
HMGCL-202ENST00000374487 PF4P02776 101 aa8.68□□□□□ -1.02
HMGCL-202ENST00000374487 NOP10Q9NPE3 64 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms