RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 MRAP2Q96G30 205 aa13.35□□□□□ -0.27
VEGFA-206ENST00000372077 LINC01587Q99440 93 aa13.35□□□□□ -0.27
VEGFA-206ENST00000372077 PKD1L1Q8TDX9 2849 aa13.34□□□□□ -0.27
VEGFA-206ENST00000372077 SMIM13P0DJ93 91 aa13.34□□□□□ -0.27
VEGFA-206ENST00000372077 FABP2P12104 132 aa13.34□□□□□ -0.27
VEGFA-206ENST00000372077 CYSLTR1Q9Y271 337 aa13.34□□□□□ -0.27
VEGFA-206ENST00000372077 IGHV3-16A0A0C4DH30 117 aa13.34□□□□□ -0.27
VEGFA-206ENST00000372077 A8MZ25 164 aa13.34□□□□□ -0.27
VEGFA-206ENST00000372077 RPL39P62891 51 aaKnown RBP13.34□□□□□ -0.27
VEGFA-206ENST00000372077 KPRPQ5T749 579 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-206ENST00000372077 TRGV11A0A075B6L2 103 aa13.33□□□□□ -0.28
VEGFA-206ENST00000372077 HIST1H4GQ99525 98 aa13.33□□□□□ -0.28
VEGFA-206ENST00000372077 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-206ENST00000372077 SMIM2Q9BVW6 85 aa13.32□□□□□ -0.28
VEGFA-206ENST00000372077 APOC4P55056 127 aa13.32□□□□□ -0.28
VEGFA-206ENST00000372077 HERV-K104P63124 156 aa13.32□□□□□ -0.28
VEGFA-206ENST00000372077 MDFICQ9P1T7 246 aa13.32□□□□□ -0.28
VEGFA-206ENST00000372077 DNAH3Q8TD57 4116 aa13.32□□□□□ -0.28
VEGFA-206ENST00000372077 IGHV3-73A0A0B4J1V6 119 aa13.31□□□□□ -0.28
VEGFA-206ENST00000372077 SUMO2P61956 95 aaKnown RBP13.31□□□□□ -0.28
VEGFA-206ENST00000372077 C9orf85Q96MD7 179 aa13.31□□□□□ -0.28
VEGFA-206ENST00000372077 OPRPNQ99935 248 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-206ENST00000372077 IGHV3-64A0A075B6Q5 118 aa13.31□□□□□ -0.28
VEGFA-206ENST00000372077 IGHV4-4A0A075B6R2 117 aa13.31□□□□□ -0.28
VEGFA-206ENST00000372077 TSPAN13O95857 204 aa13.31□□□□□ -0.28
VEGFA-206ENST00000372077 WFDC2Q14508 124 aa13.3□□□□□ -0.28
VEGFA-206ENST00000372077 C2orf66Q6UXQ4 117 aa13.3□□□□□ -0.28
VEGFA-206ENST00000372077 OR5A1Q8NGJ0 315 aa13.3□□□□□ -0.28
VEGFA-206ENST00000372077 IGHV3OR16-12A0A075B7B8 117 aa13.29□□□□□ -0.28
VEGFA-206ENST00000372077 SIVA1O15304 175 aa13.29□□□□□ -0.28
VEGFA-206ENST00000372077 SH2D6Q7Z4S9 175 aa13.28□□□□□ -0.28
VEGFA-206ENST00000372077 H3BMG7 143 aa13.28□□□□□ -0.28
VEGFA-206ENST00000372077 C11orf72Q8NBR9 251 aa13.28□□□□□ -0.28
VEGFA-206ENST00000372077 ZMAT4Q9H898 229 aa13.28□□□□□ -0.28
VEGFA-206ENST00000372077 A0A087WX48 190 aa13.27□□□□□ -0.28
VEGFA-206ENST00000372077 ATP5LO75964 103 aa13.27□□□□□ -0.28
VEGFA-206ENST00000372077 NXPH4O95158 308 aa13.27□□□□□ -0.29
VEGFA-206ENST00000372077 PLEKHB2Q96CS7 222 aa13.27□□□□□ -0.29
VEGFA-206ENST00000372077 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
VEGFA-206ENST00000372077 ZNF415Q09FC8 603 aa13.26□□□□□ -0.29
VEGFA-206ENST00000372077 SPATA25Q9BR10 227 aa13.26□□□□□ -0.29
VEGFA-206ENST00000372077 DPH3P1Q9H4G8 78 aa13.26□□□□□ -0.29
VEGFA-206ENST00000372077 CEND1Q8N111 149 aa13.26□□□□□ -0.29
VEGFA-206ENST00000372077 OR11H2Q8NH07 326 aa13.25□□□□□ -0.29
VEGFA-206ENST00000372077 PHLDA1Q8WV24 401 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-206ENST00000372077 TP53TG1Q9Y2A0 90 aa13.25□□□□□ -0.29
VEGFA-206ENST00000372077 J3QR89 54 aa13.25□□□□□ -0.29
VEGFA-206ENST00000372077 SCGB1D4Q6XE38 83 aa13.25□□□□□ -0.29
VEGFA-206ENST00000372077 TMEM263Q8WUH6 116 aaKnown RBP13.25□□□□□ -0.29
VEGFA-206ENST00000372077 BAALCQ8WXS3 180 aa13.25□□□□□ -0.29
VEGFA-206ENST00000372077 IL17DQ8TAD2 202 aa13.24□□□□□ -0.29
VEGFA-206ENST00000372077 ETDBQ3ZM63 59 aa13.24□□□□□ -0.29
VEGFA-206ENST00000372077 PTH2Q96A98 100 aa13.24□□□□□ -0.29
VEGFA-206ENST00000372077 PRADC1Q9BSG0 188 aa13.24□□□□□ -0.29
VEGFA-206ENST00000372077 MRPL16Q9NX20 251 aaKnown RBP13.24□□□□□ -0.29
VEGFA-206ENST00000372077 RRN3P1Q2M238 152 aa13.23□□□□□ -0.29
VEGFA-206ENST00000372077 SPXQ9BT56 116 aa13.23□□□□□ -0.29
VEGFA-206ENST00000372077 X6R8D5 127 aa13.23□□□□□ -0.29
VEGFA-206ENST00000372077 RNASE13Q5GAN3 156 aaKnown RBP13.23□□□□□ -0.29
VEGFA-206ENST00000372077 F8VRH5 84 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 H7C1H1 209 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 APOMO95445 188 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 ZNF56Q15929 161 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 DEFB135Q30KP9 77 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 SMIM9A6NGZ8 99 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 P0DMU3 169 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 FAM231AP0DMU4 169 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 FAM231CP0DMU5 169 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 SUMO4Q6EEV6 95 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 C16orf74Q96GX8 76 aa13.22□□□□□ -0.29
VEGFA-206ENST00000372077 PLAC8L1A1L4L8 177 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 ZNF815PA8K554 130 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 IGLL5B9A064 214 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 K7EIL1 84 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 PRB2P02812 416 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-206ENST00000372077 RNF183Q96D59 192 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 M0R2P5 195 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 C12orf74Q32Q52 190 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 TMEM170BQ5T4T1 132 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 SYT8Q8NBV8 401 aa13.21□□□□□ -0.29
VEGFA-206ENST00000372077 PIK3CD-AS1Q5SR53 167 aa13.21□□□□□ -0.3
VEGFA-206ENST00000372077 Q9UF83 564 aa13.21□□□□□ -0.3
VEGFA-206ENST00000372077 SRSF9Q13242 221 aaKnown RBP eCLIP13.2□□□□□ -0.3
VEGFA-206ENST00000372077 C11orf86A6NJI1 115 aa13.2□□□□□ -0.3
VEGFA-206ENST00000372077 DAZ2Q13117 558 aaKnown RBP13.19□□□□□ -0.3
VEGFA-206ENST00000372077 ZNF876PQ49A33 203 aa13.19□□□□□ -0.3
VEGFA-206ENST00000372077 NEXN-AS1Q8NBZ9 246 aa13.19□□□□□ -0.3
VEGFA-206ENST00000372077 LINC01546A6NGU7 62 aa13.19□□□□□ -0.3
VEGFA-206ENST00000372077 TSHBP01222 138 aa13.19□□□□□ -0.3
VEGFA-206ENST00000372077 TOMM6Q96B49 74 aa13.19□□□□□ -0.3
VEGFA-206ENST00000372077 SDHAF1A6NFY7 115 aa13.18□□□□□ -0.3
VEGFA-206ENST00000372077 HIGD1BQ9P298 99 aa13.18□□□□□ -0.3
VEGFA-206ENST00000372077 LOC107984156A0A0G2JMH3 177 aa13.18□□□□□ -0.3
VEGFA-206ENST00000372077 H7C2G1 150 aa13.18□□□□□ -0.3
VEGFA-206ENST00000372077 ORMDL2Q53FV1 153 aa13.18□□□□□ -0.3
VEGFA-206ENST00000372077 CEMP1Q6PRD7 247 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-206ENST00000372077 ARL17AQ8IVW1 177 aa13.18□□□□□ -0.3
VEGFA-206ENST00000372077 OVOL2Q9BRP0 275 aa13.18□□□□□ -0.3
VEGFA-206ENST00000372077 KIF25-AS1Q9Y6Z4 181 aa13.18□□□□□ -0.3
VEGFA-206ENST00000372077 MYMXA0A1B0GTQ4 84 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms