RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 D6R8Y8 96 aa10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 K7EP13 123 aa10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 GAS8-AS1O95177 125 aa10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 MT-ND6P03923 174 aa10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 RAB5AP20339 215 aa10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 RPS10P46783 165 aaKnown RBP10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 NRACQ8N912 160 aa10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 SACSQ9NZJ4 4579 aa10.62□□□□□ -0.71
PRPF38B-202ENST00000370022 SMKR1H3BMG3 65 aa10.62□□□□□ -0.71
PRPF38B-202ENST00000370022 PHOX2AO14813 284 aa10.62□□□□□ -0.71
PRPF38B-202ENST00000370022 WFDC10BQ8IUB3 73 aa10.62□□□□□ -0.71
PRPF38B-202ENST00000370022 C20orf78Q9BR46 151 aa10.62□□□□□ -0.71
PRPF38B-202ENST00000370022 LAMTOR2Q9Y2Q5 125 aa10.62□□□□□ -0.71
PRPF38B-202ENST00000370022 TRBV25-1A0A075B6N4 114 aa10.61□□□□□ -0.71
PRPF38B-202ENST00000370022 I3L3M4 83 aa10.61□□□□□ -0.71
PRPF38B-202ENST00000370022 DNAH10OSP0CZ25 163 aa10.61□□□□□ -0.71
PRPF38B-202ENST00000370022 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
PRPF38B-202ENST00000370022 TTC32Q5I0X7 151 aa10.61□□□□□ -0.71
PRPF38B-202ENST00000370022 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
PRPF38B-202ENST00000370022 DNAH1Q9P2D7 4330 aa10.61□□□□□ -0.71
PRPF38B-202ENST00000370022 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 TRAV9-2A0A087WT02 112 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 TGIF2-C20orf24A0A0A6YYL0 155 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 TRBV27A0A0K0K1C4 114 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 NBDYA0A0U1RRE5 68 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 TNFRSF6BO95407 300 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 POLR2KP53803 58 aaKnown RBP10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 IQCJQ1A5X6 159 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 IGHV1-24A0A0C4DH33 117 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 VCYO14598 125 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 APCSP02743 223 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 PMCHP20382 165 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 RPL32P62910 135 aaKnown RBP10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 NTM-AS1Q6ZSK4 140 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 PRELID3AQ96N28 172 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 VPS13DQ5THJ4 4388 aa10.6□□□□□ -0.71
PRPF38B-202ENST00000370022 DLEU1O43261 78 aa10.59□□□□□ -0.71
PRPF38B-202ENST00000370022 YPEL4Q96NS1 127 aa10.59□□□□□ -0.71
PRPF38B-202ENST00000370022 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
PRPF38B-202ENST00000370022 Q6ZR54 194 aa10.58□□□□□ -0.72
PRPF38B-202ENST00000370022 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
PRPF38B-202ENST00000370022 NPYP01303 97 aa10.57□□□□□ -0.72
PRPF38B-202ENST00000370022 AMTP48728 403 aa10.57□□□□□ -0.72
PRPF38B-202ENST00000370022 NIT1Q86X76 327 aa10.57□□□□□ -0.72
PRPF38B-202ENST00000370022 KIR2DL4Q99706 377 aa10.57□□□□□ -0.72
PRPF38B-202ENST00000370022 CHCHD5Q9BSY4 110 aa10.57□□□□□ -0.72
PRPF38B-202ENST00000370022 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
PRPF38B-202ENST00000370022 TMEM243Q9BU79 118 aa10.56□□□□□ -0.72
PRPF38B-202ENST00000370022 MRPL18Q9H0U6 180 aaKnown RBP10.56□□□□□ -0.72
PRPF38B-202ENST00000370022 A0A087WX48 190 aa10.56□□□□□ -0.72
PRPF38B-202ENST00000370022 M0R2N4 97 aa10.56□□□□□ -0.72
PRPF38B-202ENST00000370022 SMIM2Q9BVW6 85 aa10.56□□□□□ -0.72
PRPF38B-202ENST00000370022 HSBP1L1C9JCN9 74 aa10.55□□□□□ -0.72
PRPF38B-202ENST00000370022 TSHBP01222 138 aa10.55□□□□□ -0.72
PRPF38B-202ENST00000370022 FCER1GP30273 86 aa10.55□□□□□ -0.72
PRPF38B-202ENST00000370022 MAP1LC3AQ9H492 121 aa10.55□□□□□ -0.72
PRPF38B-202ENST00000370022 TRAPPC1Q9Y5R8 145 aa10.55□□□□□ -0.72
PRPF38B-202ENST00000370022 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
PRPF38B-202ENST00000370022 H7C423 109 aa10.54□□□□□ -0.72
PRPF38B-202ENST00000370022 UBE2L6O14933 153 aa10.54□□□□□ -0.72
PRPF38B-202ENST00000370022 KMT2AQ03164 3969 aa10.54□□□□□ -0.72
PRPF38B-202ENST00000370022 IFITM10A6NMD0 228 aa10.53□□□□□ -0.72
PRPF38B-202ENST00000370022 M0R143 59 aa10.53□□□□□ -0.72
PRPF38B-202ENST00000370022 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
PRPF38B-202ENST00000370022 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
PRPF38B-202ENST00000370022 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
PRPF38B-202ENST00000370022 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
PRPF38B-202ENST00000370022 KIAA1644Q3SXP7 199 aa10.53□□□□□ -0.72
PRPF38B-202ENST00000370022 KRTAP1-5Q9BYS1 174 aa10.53□□□□□ -0.72
PRPF38B-202ENST00000370022 HYDINQ4G0P3 5121 aa10.52□□□□□ -0.72
PRPF38B-202ENST00000370022 ZNF25P17030 456 aaPredicted RBP10.52□□□□□ -0.72
PRPF38B-202ENST00000370022 LAGE3Q14657 143 aa10.52□□□□□ -0.72
PRPF38B-202ENST00000370022 DEFB104AQ8WTQ1 72 aa10.52□□□□□ -0.72
PRPF38B-202ENST00000370022 ESDP10768 282 aa10.52□□□□□ -0.73
PRPF38B-202ENST00000370022 GAGE6Q13070 117 aa10.52□□□□□ -0.73
PRPF38B-202ENST00000370022 OR10D4PQ8NGN7 298 aa10.52□□□□□ -0.73
PRPF38B-202ENST00000370022 ALKBH7Q9BT30 221 aaPredicted RBP10.52□□□□□ -0.73
PRPF38B-202ENST00000370022 A0A1B0GUV1 79 aa10.51□□□□□ -0.73
PRPF38B-202ENST00000370022 IBA57-AS1B1ANH7 110 aa10.51□□□□□ -0.73
PRPF38B-202ENST00000370022 K7EMI3 77 aa10.51□□□□□ -0.73
PRPF38B-202ENST00000370022 JOSD1Q15040 202 aaPredicted RBP10.51□□□□□ -0.73
PRPF38B-202ENST00000370022 MPV17L2Q567V2 206 aa10.51□□□□□ -0.73
PRPF38B-202ENST00000370022 C1orf134Q5TEV5 83 aa10.51□□□□□ -0.73
PRPF38B-202ENST00000370022 NXT2Q9NPJ8 142 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-202ENST00000370022 DNAH6Q9C0G6 4158 aa10.51□□□□□ -0.73
PRPF38B-202ENST00000370022 G0S2P27469 103 aa10.5□□□□□ -0.73
PRPF38B-202ENST00000370022 RBX1P62877 108 aa10.5□□□□□ -0.73
PRPF38B-202ENST00000370022 HIST3H2BBQ8N257 126 aa10.5□□□□□ -0.73
PRPF38B-202ENST00000370022 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
PRPF38B-202ENST00000370022 Q8N8P6 123 aa10.5□□□□□ -0.73
PRPF38B-202ENST00000370022 LOC389332A0A1B0GUA5 103 aa10.49□□□□□ -0.73
PRPF38B-202ENST00000370022 SMAGPQ0VAQ4 97 aa10.49□□□□□ -0.73
PRPF38B-202ENST00000370022 NFE4Q86UQ8 179 aa10.49□□□□□ -0.73
PRPF38B-202ENST00000370022 Q8N3U1 123 aa10.49□□□□□ -0.73
PRPF38B-202ENST00000370022 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
PRPF38B-202ENST00000370022 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
PRPF38B-202ENST00000370022 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
PRPF38B-202ENST00000370022 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
PRPF38B-202ENST00000370022 Q8N976 141 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms