RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
TUBE1-202ENST00000368662 TSHBP01222 138 aa8.6□□□□□ -1.03
TUBE1-202ENST00000368662 AMTP48728 403 aa8.6□□□□□ -1.03
TUBE1-202ENST00000368662 PDZD11Q5EBL8 140 aa8.6□□□□□ -1.03
TUBE1-202ENST00000368662 ATP6V0E2Q8NHE4 81 aa8.6□□□□□ -1.03
TUBE1-202ENST00000368662 PHLDA1Q8WV24 401 aaPredicted RBP8.6□□□□□ -1.03
TUBE1-202ENST00000368662 TMEM18Q96B42 140 aa8.6□□□□□ -1.03
TUBE1-202ENST00000368662 PACRGQ96M98 296 aaPredicted RBP8.6□□□□□ -1.03
TUBE1-202ENST00000368662 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
TUBE1-202ENST00000368662 IGHV1-24A0A0C4DH33 117 aa8.59□□□□□ -1.03
TUBE1-202ENST00000368662 IGHV3-38A0A0C4DH36 116 aa8.59□□□□□ -1.03
TUBE1-202ENST00000368662 NUDT3O95989 172 aa8.59□□□□□ -1.03
TUBE1-202ENST00000368662 HBDP02042 147 aa8.59□□□□□ -1.03
TUBE1-202ENST00000368662 FAM19A2Q8N3H0 131 aa8.58□□□□□ -1.04
TUBE1-202ENST00000368662 BTF3P20290 206 aaKnown RBP8.57□□□□□ -1.04
TUBE1-202ENST00000368662 C15orf53Q8NAA6 179 aa8.57□□□□□ -1.04
TUBE1-202ENST00000368662 A0A096LPF7 62 aa8.57□□□□□ -1.04
TUBE1-202ENST00000368662 PMCHL1Q16048 86 aa8.57□□□□□ -1.04
TUBE1-202ENST00000368662 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
TUBE1-202ENST00000368662 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
TUBE1-202ENST00000368662 TRBV25-1A0A075B6N4 114 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 LEPROTL1O95214 131 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 C2orf66Q6UXQ4 117 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 A0A096LNJ9 63 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 TRBV6-8A0A0A6YYG3 113 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 FABP4P15090 132 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 C20orf203Q8NBC4 194 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 DEFB104AQ8WTQ1 72 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 HSPB8Q9UJY1 196 aa8.56□□□□□ -1.04
TUBE1-202ENST00000368662 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
TUBE1-202ENST00000368662 TIRAPP58753 221 aa8.54□□□□□ -1.04
TUBE1-202ENST00000368662 SMAGPQ0VAQ4 97 aa8.54□□□□□ -1.04
TUBE1-202ENST00000368662 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
TUBE1-202ENST00000368662 DNAH7Q8WXX0 4024 aa8.54□□□□□ -1.04
TUBE1-202ENST00000368662 IFITM10A6NMD0 228 aa8.54□□□□□ -1.04
TUBE1-202ENST00000368662 H7C423 109 aa8.54□□□□□ -1.04
TUBE1-202ENST00000368662 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
TUBE1-202ENST00000368662 NUPR2A6NF83 97 aa8.53□□□□□ -1.04
TUBE1-202ENST00000368662 UBE2L6O14933 153 aa8.53□□□□□ -1.04
TUBE1-202ENST00000368662 IGLL5B9A064 214 aa8.53□□□□□ -1.04
TUBE1-202ENST00000368662 ATP5LO75964 103 aa8.53□□□□□ -1.04
TUBE1-202ENST00000368662 ERASQ7Z444 233 aa8.53□□□□□ -1.04
TUBE1-202ENST00000368662 NPSP0C0P6 89 aa8.52□□□□□ -1.05
TUBE1-202ENST00000368662 RPL39P62891 51 aaKnown RBP8.52□□□□□ -1.05
TUBE1-202ENST00000368662 LELP1Q5T871 98 aa8.52□□□□□ -1.05
TUBE1-202ENST00000368662 CEMP1Q6PRD7 247 aaPredicted RBP8.52□□□□□ -1.05
TUBE1-202ENST00000368662 SCGB3A1Q96QR1 104 aa8.52□□□□□ -1.05
TUBE1-202ENST00000368662 TIMM17AQ99595 171 aa8.52□□□□□ -1.05
TUBE1-202ENST00000368662 DYNC2H1Q8NCM8 4307 aaKnown RBP8.52□□□□□ -1.05
TUBE1-202ENST00000368662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-202ENST00000368662 IGKV2-29A2NJV5 120 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-202ENST00000368662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-202ENST00000368662 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
TUBE1-202ENST00000368662 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
TUBE1-202ENST00000368662 SPANXA1Q9NS26 97 aa8.51□□□□□ -1.05
TUBE1-202ENST00000368662 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-202ENST00000368662 PYGO1Q9Y3Y4 419 aa8.51□□□□□ -1.05
TUBE1-202ENST00000368662 PKIAP61925 76 aa8.51□□□□□ -1.05
TUBE1-202ENST00000368662 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
TUBE1-202ENST00000368662 TIMM21Q9BVV7 248 aa8.51□□□□□ -1.05
TUBE1-202ENST00000368662 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
TUBE1-202ENST00000368662 TCTAP57738 103 aa8.5□□□□□ -1.05
TUBE1-202ENST00000368662 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
TUBE1-202ENST00000368662 MRPL52Q86TS9 123 aaKnown RBP8.5□□□□□ -1.05
TUBE1-202ENST00000368662 OR10D4PQ8NGN7 298 aa8.5□□□□□ -1.05
TUBE1-202ENST00000368662 IFI27L1Q96BM0 104 aa8.5□□□□□ -1.05
TUBE1-202ENST00000368662 CSDC2Q9Y534 153 aaKnown RBP8.5□□□□□ -1.05
TUBE1-202ENST00000368662 IGIPA6NJ69 53 aa8.5□□□□□ -1.05
TUBE1-202ENST00000368662 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
TUBE1-202ENST00000368662 Q6ZN92 141 aa8.5□□□□□ -1.05
TUBE1-202ENST00000368662 UBE2D4Q9Y2X8 147 aa8.5□□□□□ -1.05
TUBE1-202ENST00000368662 TGP01266 2768 aa8.49□□□□□ -1.05
TUBE1-202ENST00000368662 TRAV8-6A0A0B4J262 113 aa8.49□□□□□ -1.05
TUBE1-202ENST00000368662 AMMECR1LQ6DCA0 310 aa8.49□□□□□ -1.05
TUBE1-202ENST00000368662 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
TUBE1-202ENST00000368662 LOC105371267A0A1B0GV96 52 aa8.48□□□□□ -1.05
TUBE1-202ENST00000368662 FGF6P10767 208 aa8.48□□□□□ -1.05
TUBE1-202ENST00000368662 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
TUBE1-202ENST00000368662 KRTDAPP60985 99 aa8.48□□□□□ -1.05
TUBE1-202ENST00000368662 ESRGQ1W209 222 aa8.48□□□□□ -1.05
TUBE1-202ENST00000368662 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
TUBE1-202ENST00000368662 TMEM262E9PQX1 116 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 SYS1-DBNDD2H3BUS1 97 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 PRSS1P07477 247 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 C3orf79P0CE67 100 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 AKR1D1P51857 326 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 CCL18P55774 89 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 GAGE6Q13070 117 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 SPATA12Q7Z6I5 190 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 A0A1B0GUV1 79 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
TUBE1-202ENST00000368662 PET117Q6UWS5 81 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 OR5A1Q8NGJ0 315 aa8.47□□□□□ -1.05
TUBE1-202ENST00000368662 IGLV4-3A0A075B6K6 122 aa8.46□□□□□ -1.06
TUBE1-202ENST00000368662 APLNQ9ULZ1 77 aa8.46□□□□□ -1.06
TUBE1-202ENST00000368662 A0A087WX48 190 aa8.45□□□□□ -1.06
TUBE1-202ENST00000368662 TRAV12-1A0A0B4J245 112 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms