RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 LINC00315P59091 139 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 GAGE5Q13069 117 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 GAGE6Q13070 117 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
TPM3-213ENST00000368545 PYY3Q5JQD4 70 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 ZNF705AQ6ZN79 300 aaPredicted RBP6.26□□□□□ -1.41
TPM3-213ENST00000368545 KIR2DL5AQ8N109 375 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 FAM19A2Q8N3H0 131 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 KIR2DL5BQ8NHK3 375 aa6.26□□□□□ -1.41
TPM3-213ENST00000368545 TRAV26-1A0A087WT03 109 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 NUDT3O95989 172 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 CRYGDP07320 174 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 APOC4P55056 127 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 SRSF9Q13242 221 aaKnown RBP eCLIP6.25□□□□□ -1.41
TPM3-213ENST00000368545 ZNF56Q15929 161 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 FAM74A4Q5TZK3 123 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 RASL10AQ92737 203 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 JPT2Q9H910 190 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 K7EMI3 77 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 GAS8-AS1O95177 125 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 GATA1P15976 413 aaPredicted RBP6.25□□□□□ -1.41
TPM3-213ENST00000368545 Q8N8P6 123 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 EDA2RQ9HAV5 297 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 HSPB8Q9UJY1 196 aa6.25□□□□□ -1.41
TPM3-213ENST00000368545 H7C1H1 209 aa6.24□□□□□ -1.41
TPM3-213ENST00000368545 TCAPO15273 167 aa6.24□□□□□ -1.41
TPM3-213ENST00000368545 LEPROTL1O95214 131 aa6.24□□□□□ -1.41
TPM3-213ENST00000368545 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
TPM3-213ENST00000368545 RRN3P1Q2M238 152 aa6.24□□□□□ -1.41
TPM3-213ENST00000368545 LGALS9BQ3B8N2 356 aa6.24□□□□□ -1.41
TPM3-213ENST00000368545 SMIM2Q9BVW6 85 aa6.24□□□□□ -1.41
TPM3-213ENST00000368545 RYR2Q92736 4967 aa6.24□□□□□ -1.41
TPM3-213ENST00000368545 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 HBDP02042 147 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 PRM2P04554 102 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 AZU1P20160 251 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 DAZ2Q13117 558 aaKnown RBP6.23□□□□□ -1.41
TPM3-213ENST00000368545 NACAE9PAV3 2078 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 TRBV6-5A0A0K0K1A5 114 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 SMIM9A6NGZ8 99 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 TSHBP01222 138 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 PMCHL1Q16048 86 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 UFSP1Q6NVU6 142 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 Q6ZVQ6 151 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 RPL39LQ96EH5 51 aaKnown RBP6.23□□□□□ -1.41
TPM3-213ENST00000368545 ST20Q9HBF5 79 aa6.23□□□□□ -1.41
TPM3-213ENST00000368545 KRTDAPP60985 99 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 ORMDL2Q53FV1 153 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 CFAP126Q5VTH2 177 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 ZFP2Q6ZN57 461 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 MRPL16Q9NX20 251 aaKnown RBP6.22□□□□□ -1.41
TPM3-213ENST00000368545 NOTCH3Q9UM47 2321 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 M0QY20 66 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 RS1O15537 224 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 C3orf79P0CE67 100 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 SEC61GP60059 68 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 KRTAP10-11P60412 298 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 LAGE3Q14657 143 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 TMEM70Q9BUB7 260 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
TPM3-213ENST00000368545 A0A096LNJ9 63 aa6.21□□□□□ -1.42
TPM3-213ENST00000368545 PLAC8L1A1L4L8 177 aa6.21□□□□□ -1.42
TPM3-213ENST00000368545 TMEM238C9JI98 176 aa6.21□□□□□ -1.42
TPM3-213ENST00000368545 FCER1GP30273 86 aa6.21□□□□□ -1.42
TPM3-213ENST00000368545 RBX1P62877 108 aa6.21□□□□□ -1.42
TPM3-213ENST00000368545 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.42
TPM3-213ENST00000368545 MAP1LC3CQ9BXW4 147 aa6.21□□□□□ -1.42
TPM3-213ENST00000368545 HERC2O95714 4834 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 C20orf202A1L168 122 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 LINC01549A6NIU2 74 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 OR4C5Q8NGB2 326 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 C2orf48Q96LS8 159 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 KIR2DL4Q99706 377 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 NOP10Q9NPE3 64 aaKnown RBP6.2□□□□□ -1.42
TPM3-213ENST00000368545 EPPK1P58107 5090 aaKnown RBP6.2□□□□□ -1.42
TPM3-213ENST00000368545 CMYA5Q8N3K9 4069 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 TRBV27A0A0K0K1C4 114 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 SDHAF1A6NFY7 115 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 IGHV3-53P01767 116 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 POLR2KP53803 58 aaKnown RBP6.2□□□□□ -1.42
TPM3-213ENST00000368545 ZNF479Q96JC4 524 aa6.2□□□□□ -1.42
TPM3-213ENST00000368545 Q6ZTI0 123 aa6.19□□□□□ -1.42
TPM3-213ENST00000368545 SYS1-DBNDD2H3BUS1 97 aa6.19□□□□□ -1.42
TPM3-213ENST00000368545 TEX43Q6ZNM6 134 aa6.19□□□□□ -1.42
TPM3-213ENST00000368545 SPATA12Q7Z6I5 190 aa6.19□□□□□ -1.42
TPM3-213ENST00000368545 C14orf144Q96I85 54 aa6.19□□□□□ -1.42
TPM3-213ENST00000368545 DNAJC30Q96LL9 226 aa6.19□□□□□ -1.42
TPM3-213ENST00000368545 DNAH1Q9P2D7 4330 aa6.18□□□□□ -1.42
TPM3-213ENST00000368545 TRGV2A0A075B6R0 118 aa6.18□□□□□ -1.42
TPM3-213ENST00000368545 IGHV3-73A0A0B4J1V6 119 aa6.18□□□□□ -1.42
TPM3-213ENST00000368545 DEFB135Q30KP9 77 aa6.18□□□□□ -1.42
TPM3-213ENST00000368545 IFI27L1Q96BM0 104 aa6.18□□□□□ -1.42
TPM3-213ENST00000368545 C2orf88Q9BSF0 95 aa6.18□□□□□ -1.42
TPM3-213ENST00000368545 TNFRSF18Q9Y5U5 241 aa6.18□□□□□ -1.42
TPM3-213ENST00000368545 TRBV10-1A0A0K0K1A3 114 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms