RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SERF1AO75920 110 aa14.38□□□□□ -0.11
SHISA4-201ENST00000362011 MRPL23Q16540 153 aaKnown RBP14.38□□□□□ -0.11
SHISA4-201ENST00000362011 COA6Q5JTJ3 125 aaKnown RBP14.38□□□□□ -0.11
SHISA4-201ENST00000362011 CHCHD1Q96BP2 118 aaKnown RBP14.38□□□□□ -0.11
SHISA4-201ENST00000362011 TCAPO15273 167 aa14.37□□□□□ -0.11
SHISA4-201ENST00000362011 ATP6V0E2Q8NHE4 81 aa14.37□□□□□ -0.11
SHISA4-201ENST00000362011 AP5S1Q9NUS5 200 aa14.37□□□□□ -0.11
SHISA4-201ENST00000362011 PLECQ15149 4684 aaKnown RBP14.36□□□□□ -0.11
SHISA4-201ENST00000362011 LINC01546A6NGU7 62 aa14.36□□□□□ -0.11
SHISA4-201ENST00000362011 K7EMI3 77 aa14.36□□□□□ -0.11
SHISA4-201ENST00000362011 FCER1GP30273 86 aa14.36□□□□□ -0.11
SHISA4-201ENST00000362011 LINC00310P59036 64 aa14.36□□□□□ -0.11
SHISA4-201ENST00000362011 COTL1Q14019 142 aa14.36□□□□□ -0.11
SHISA4-201ENST00000362011 SH2D6Q7Z4S9 175 aa14.36□□□□□ -0.11
SHISA4-201ENST00000362011 A0A096LPF7 62 aa14.35□□□□□ -0.11
SHISA4-201ENST00000362011 HSBP1O75506 76 aa14.34□□□□□ -0.11
SHISA4-201ENST00000362011 TSHBP01222 138 aa14.34□□□□□ -0.11
SHISA4-201ENST00000362011 LAGE3Q14657 143 aa14.34□□□□□ -0.11
SHISA4-201ENST00000362011 DEFB104AQ8WTQ1 72 aa14.34□□□□□ -0.11
SHISA4-201ENST00000362011 NUDT3O95989 172 aa14.33□□□□□ -0.12
SHISA4-201ENST00000362011 ORMDL2Q53FV1 153 aa14.33□□□□□ -0.12
SHISA4-201ENST00000362011 TMEM97Q5BJF2 176 aa14.33□□□□□ -0.12
SHISA4-201ENST00000362011 C15orf53Q8NAA6 179 aa14.33□□□□□ -0.12
SHISA4-201ENST00000362011 NUPR1O60356 82 aa14.32□□□□□ -0.12
SHISA4-201ENST00000362011 ESDP10768 282 aa14.32□□□□□ -0.12
SHISA4-201ENST00000362011 GTSF1LQ9H1H1 148 aa14.31□□□□□ -0.12
SHISA4-201ENST00000362011 NUPR2A6NF83 97 aa14.3□□□□□ -0.12
SHISA4-201ENST00000362011 IGLL5B9A064 214 aa14.3□□□□□ -0.12
SHISA4-201ENST00000362011 SNRPEP62304 92 aaKnown RBP14.3□□□□□ -0.12
SHISA4-201ENST00000362011 CEMP1Q6PRD7 247 aaPredicted RBP14.3□□□□□ -0.12
SHISA4-201ENST00000362011 AMTP48728 403 aa14.29□□□□□ -0.12
SHISA4-201ENST00000362011 IGHV1-24A0A0C4DH33 117 aa14.28□□□□□ -0.12
SHISA4-201ENST00000362011 C5orf52A6NGY3 159 aa14.28□□□□□ -0.12
SHISA4-201ENST00000362011 G0S2P27469 103 aa14.28□□□□□ -0.12
SHISA4-201ENST00000362011 PMCHL1Q16048 86 aa14.28□□□□□ -0.12
SHISA4-201ENST00000362011 NTM-AS1Q6ZSK4 140 aa14.28□□□□□ -0.12
SHISA4-201ENST00000362011 TRBV25-1A0A075B6N4 114 aa14.27□□□□□ -0.12
SHISA4-201ENST00000362011 BTF3P20290 206 aaKnown RBP14.27□□□□□ -0.12
SHISA4-201ENST00000362011 PDZD11Q5EBL8 140 aa14.27□□□□□ -0.12
SHISA4-201ENST00000362011 FAM19A2Q8N3H0 131 aa14.27□□□□□ -0.12
SHISA4-201ENST00000362011 KLK5Q9Y337 293 aaPredicted RBP14.27□□□□□ -0.12
SHISA4-201ENST00000362011 ALMS1Q8TCU4 4167 aa14.26□□□□□ -0.13
SHISA4-201ENST00000362011 TRBV6-8A0A0A6YYG3 113 aa14.26□□□□□ -0.13
SHISA4-201ENST00000362011 HBDP02042 147 aa14.26□□□□□ -0.13
SHISA4-201ENST00000362011 HIST3H2BBQ8N257 126 aa14.26□□□□□ -0.13
SHISA4-201ENST00000362011 CHCHD7Q9BUK0 85 aa14.26□□□□□ -0.13
SHISA4-201ENST00000362011 A0A096LNJ9 63 aa14.25□□□□□ -0.13
SHISA4-201ENST00000362011 S100A2P29034 98 aa14.25□□□□□ -0.13
SHISA4-201ENST00000362011 C20orf203Q8NBC4 194 aa14.25□□□□□ -0.13
SHISA4-201ENST00000362011 TMEM243Q9BU79 118 aa14.25□□□□□ -0.13
SHISA4-201ENST00000362011 TIRAPP58753 221 aa14.24□□□□□ -0.13
SHISA4-201ENST00000362011 LYPD5Q6UWN5 251 aa14.24□□□□□ -0.13
SHISA4-201ENST00000362011 TMEM18Q96B42 140 aa14.24□□□□□ -0.13
SHISA4-201ENST00000362011 CYSLTR1Q9Y271 337 aa14.24□□□□□ -0.13
SHISA4-201ENST00000362011 LINC01549A6NIU2 74 aa14.23□□□□□ -0.13
SHISA4-201ENST00000362011 C2orf66Q6UXQ4 117 aa14.23□□□□□ -0.13
SHISA4-201ENST00000362011 LELP1Q5T871 98 aa14.22□□□□□ -0.13
SHISA4-201ENST00000362011 TOMM6Q96B49 74 aa14.22□□□□□ -0.13
SHISA4-201ENST00000362011 KRTAP17-1Q9BYP8 105 aa14.22□□□□□ -0.13
SHISA4-201ENST00000362011 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.21□□□□□ -0.13
SHISA4-201ENST00000362011 IGKV2-29A2NJV5 120 aaPredicted RBP14.21□□□□□ -0.13
SHISA4-201ENST00000362011 UBE2L6O14933 153 aa14.21□□□□□ -0.13
SHISA4-201ENST00000362011 RPL39P62891 51 aaKnown RBP14.21□□□□□ -0.13
SHISA4-201ENST00000362011 TCTAP57738 103 aa14.2□□□□□ -0.14
SHISA4-201ENST00000362011 ESRGQ1W209 222 aa14.2□□□□□ -0.14
SHISA4-201ENST00000362011 PACRGQ96M98 296 aaPredicted RBP14.2□□□□□ -0.14
SHISA4-201ENST00000362011 CHCHD5Q9BSY4 110 aa14.2□□□□□ -0.14
SHISA4-201ENST00000362011 APLNQ9ULZ1 77 aa14.2□□□□□ -0.14
SHISA4-201ENST00000362011 H7C423 109 aa14.19□□□□□ -0.14
SHISA4-201ENST00000362011 LEPROTL1O95214 131 aa14.19□□□□□ -0.14
SHISA4-201ENST00000362011 FABP4P15090 132 aa14.18□□□□□ -0.14
SHISA4-201ENST00000362011 SMAGPQ0VAQ4 97 aa14.18□□□□□ -0.14
SHISA4-201ENST00000362011 TRAV8-6A0A0B4J262 113 aa14.17□□□□□ -0.14
SHISA4-201ENST00000362011 GAGE6Q13070 117 aa14.17□□□□□ -0.14
SHISA4-201ENST00000362011 SCGB3A1Q96QR1 104 aa14.17□□□□□ -0.14
SHISA4-201ENST00000362011 HIST1H2BLQ99880 126 aa14.17□□□□□ -0.14
SHISA4-201ENST00000362011 HSPB8Q9UJY1 196 aa14.17□□□□□ -0.14
SHISA4-201ENST00000362011 CCL18P55774 89 aa14.16□□□□□ -0.14
SHISA4-201ENST00000362011 TIMM21Q9BVV7 248 aa14.16□□□□□ -0.14
SHISA4-201ENST00000362011 UBE2D4Q9Y2X8 147 aa14.16□□□□□ -0.14
SHISA4-201ENST00000362011 IFITM10A6NMD0 228 aa14.15□□□□□ -0.14
SHISA4-201ENST00000362011 ATP5LO75964 103 aa14.15□□□□□ -0.14
SHISA4-201ENST00000362011 PKIAP61925 76 aa14.15□□□□□ -0.14
SHISA4-201ENST00000362011 AMMECR1LQ6DCA0 310 aa14.15□□□□□ -0.14
SHISA4-201ENST00000362011 ERASQ7Z444 233 aa14.15□□□□□ -0.14
SHISA4-201ENST00000362011 SPANXA1Q9NS26 97 aa14.15□□□□□ -0.14
SHISA4-201ENST00000362011 FGF6P10767 208 aa14.15□□□□□ -0.15
SHISA4-201ENST00000362011 LINC00173Q6ZV60 143 aa14.15□□□□□ -0.15
SHISA4-201ENST00000362011 MRPL52Q86TS9 123 aaKnown RBP14.15□□□□□ -0.15
SHISA4-201ENST00000362011 TIMM17AQ99595 171 aa14.15□□□□□ -0.15
SHISA4-201ENST00000362011 PYGO1Q9Y3Y4 419 aa14.15□□□□□ -0.15
SHISA4-201ENST00000362011 IGIPA6NJ69 53 aa14.14□□□□□ -0.15
SHISA4-201ENST00000362011 TMEM262E9PQX1 116 aa14.14□□□□□ -0.15
SHISA4-201ENST00000362011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.14□□□□□ -0.15
SHISA4-201ENST00000362011 LINC00476Q8WZB0 136 aa14.14□□□□□ -0.15
SHISA4-201ENST00000362011 IFI27L1Q96BM0 104 aa14.14□□□□□ -0.15
SHISA4-201ENST00000362011 TMEM141Q96I45 108 aa14.14□□□□□ -0.15
SHISA4-201ENST00000362011 MRPS16Q9Y3D3 137 aaKnown RBP14.14□□□□□ -0.15
SHISA4-201ENST00000362011 FRAS1Q86XX4 4008 aa14.13□□□□□ -0.15
SHISA4-201ENST00000362011 ZNF25P17030 456 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms