RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 LYZP61626 148 aa8.33□□□□□ -1.08
PSEN1-202ENST00000357710 CD164L2Q6UWJ8 174 aa8.33□□□□□ -1.08
PSEN1-202ENST00000357710 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
PSEN1-202ENST00000357710 CADP27708 2225 aa8.33□□□□□ -1.08
PSEN1-202ENST00000357710 F8WEM9 126 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 IGHV1-69P01742 117 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 TRGV3P03979 118 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 KTN1-AS1Q86SY8 53 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 NBASA2RRP1 2371 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 SPRY3O43610 288 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 WT1-ASQ06250 92 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 LINC00846Q9NV44 126 aa8.32□□□□□ -1.08
PSEN1-202ENST00000357710 IGHV3-64DA0A0J9YX35 117 aa8.31□□□□□ -1.08
PSEN1-202ENST00000357710 Q8N2B8 174 aa8.31□□□□□ -1.08
PSEN1-202ENST00000357710 BBC3Q96PG8 261 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-202ENST00000357710 DSCAMO60469 2012 aa8.31□□□□□ -1.08
PSEN1-202ENST00000357710 TSHBP01222 138 aa8.31□□□□□ -1.08
PSEN1-202ENST00000357710 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
PSEN1-202ENST00000357710 HIVEP3Q5T1R4 2406 aa8.31□□□□□ -1.08
PSEN1-202ENST00000357710 LYRM9A8MSI8 78 aa8.3□□□□□ -1.08
PSEN1-202ENST00000357710 IGHV1-46P01743 117 aa8.3□□□□□ -1.08
PSEN1-202ENST00000357710 PRB1P04280 392 aa8.3□□□□□ -1.08
PSEN1-202ENST00000357710 ESRGQ1W209 222 aa8.3□□□□□ -1.08
PSEN1-202ENST00000357710 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
PSEN1-202ENST00000357710 E7EQL1 145 aa8.3□□□□□ -1.08
PSEN1-202ENST00000357710 TRBV12-3P01733 135 aa8.3□□□□□ -1.08
PSEN1-202ENST00000357710 HOXD3P31249 432 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-202ENST00000357710 VMO1Q7Z5L0 202 aa8.29□□□□□ -1.08
PSEN1-202ENST00000357710 ZNF843Q8N446 348 aa8.29□□□□□ -1.08
PSEN1-202ENST00000357710 PLCE1Q9P212 2302 aa8.29□□□□□ -1.08
PSEN1-202ENST00000357710 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-202ENST00000357710 LY6G5BQ8NDX9 201 aa8.29□□□□□ -1.08
PSEN1-202ENST00000357710 UBE2E2Q96LR5 201 aa8.29□□□□□ -1.08
PSEN1-202ENST00000357710 IGF1P05019 195 aa8.28□□□□□ -1.08
PSEN1-202ENST00000357710 TRAV23DV6A0A075B6W5 121 aa8.28□□□□□ -1.08
PSEN1-202ENST00000357710 TRBV27A0A0K0K1C4 114 aa8.28□□□□□ -1.08
PSEN1-202ENST00000357710 SRRM5B3KS81 715 aa8.28□□□□□ -1.08
PSEN1-202ENST00000357710 APOC4P55056 127 aa8.28□□□□□ -1.08
PSEN1-202ENST00000357710 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
PSEN1-202ENST00000357710 ANKHD1Q8IWZ3 2542 aaKnown RBP8.28□□□□□ -1.08
PSEN1-202ENST00000357710 IGSF10Q6WRI0 2623 aa8.28□□□□□ -1.08
PSEN1-202ENST00000357710 NDUFS5O43920 106 aa8.27□□□□□ -1.09
PSEN1-202ENST00000357710 SPANXN1Q5VSR9 72 aa8.27□□□□□ -1.09
PSEN1-202ENST00000357710 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
PSEN1-202ENST00000357710 TRAV12-3A0A0B4J271 114 aa8.27□□□□□ -1.09
PSEN1-202ENST00000357710 RNF223E7ERA6 249 aa8.27□□□□□ -1.09
PSEN1-202ENST00000357710 SOCS3O14543 225 aa8.27□□□□□ -1.09
PSEN1-202ENST00000357710 MPLKIPQ8TAP9 179 aa8.27□□□□□ -1.09
PSEN1-202ENST00000357710 IGHV7-4-1A0A0J9YVY3 117 aa8.26□□□□□ -1.09
PSEN1-202ENST00000357710 NACAE9PAV3 2078 aa8.26□□□□□ -1.09
PSEN1-202ENST00000357710 CGB3P0DN86 165 aa8.26□□□□□ -1.09
PSEN1-202ENST00000357710 CGB7P0DN87 165 aa8.26□□□□□ -1.09
PSEN1-202ENST00000357710 Q1T7F1 81 aa8.26□□□□□ -1.09
PSEN1-202ENST00000357710 IGKV2-40A0A087WW87 121 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-202ENST00000357710 ERC2-IT1O76042 136 aa8.25□□□□□ -1.09
PSEN1-202ENST00000357710 LHBP01229 141 aa8.25□□□□□ -1.09
PSEN1-202ENST00000357710 IGKV2D-40P01614 121 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-202ENST00000357710 IGKV1-16P04430 117 aa8.25□□□□□ -1.09
PSEN1-202ENST00000357710 RUSC1-AS1Q66K80 236 aa8.25□□□□□ -1.09
PSEN1-202ENST00000357710 IGHV3-48P01763 117 aa8.25□□□□□ -1.09
PSEN1-202ENST00000357710 C19orf84I3L1E1 186 aa8.24□□□□□ -1.09
PSEN1-202ENST00000357710 KALRNO60229 2985 aa8.24□□□□□ -1.09
PSEN1-202ENST00000357710 C11orf45Q8TAV5 145 aa8.24□□□□□ -1.09
PSEN1-202ENST00000357710 PRRC2AP48634 2157 aaKnown RBP8.24□□□□□ -1.09
PSEN1-202ENST00000357710 MIFP14174 115 aa8.24□□□□□ -1.09
PSEN1-202ENST00000357710 RNASE4P34096 147 aaKnown RBP8.24□□□□□ -1.09
PSEN1-202ENST00000357710 ZNF833PQ6ZTB9 187 aa8.24□□□□□ -1.09
PSEN1-202ENST00000357710 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
PSEN1-202ENST00000357710 IGKV3D-20A0A0C4DH25 116 aa8.23□□□□□ -1.09
PSEN1-202ENST00000357710 IGHV3-30-3P0DP02 117 aa8.23□□□□□ -1.09
PSEN1-202ENST00000357710 RMI2Q96E14 147 aa8.23□□□□□ -1.09
PSEN1-202ENST00000357710 C11orf68Q9H3H3 251 aaKnown RBP8.23□□□□□ -1.09
PSEN1-202ENST00000357710 ICE1Q9Y2F5 2266 aa8.23□□□□□ -1.09
PSEN1-202ENST00000357710 IGKV1D-17A0A075B6S4 117 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 BPESC1Q9GZL8 116 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 ZFAND3Q9H8U3 227 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 MED14OSP0DP75 135 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 C17orf58Q2M2W7 97 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 CCL13Q99616 98 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 LINC00574Q9H8X3 128 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 SPTBN1Q01082 2364 aaKnown RBP8.22□□□□□ -1.09
PSEN1-202ENST00000357710 ARFGEF3Q5TH69 2177 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 VCYO14598 125 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 UBE2BP63146 152 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 KHDC1LQ5JSQ8 128 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 CCL17Q92583 94 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
PSEN1-202ENST00000357710 H3BS24 57 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 TFF1P04155 84 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 FAM229BQ4G0N7 80 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 C14orf132Q9NPU4 83 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 DSCAML1Q8TD84 2053 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 PKDREJQ9NTG1 2253 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 ROS1P08922 2347 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 IGHV4OR15-8A0A075B7B6 117 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 A0A087WW49 117 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 C11orf71Q6IPW1 123 aa8.21□□□□□ -1.1
PSEN1-202ENST00000357710 Q8TAT8 98 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms