RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 Q8N8P6 123 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 NRACQ8N912 160 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 CSNK1G2-AS1Q8NCQ2 148 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 OR10D4PQ8NGN7 298 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 PRSS3P2Q8NHM4 247 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 C18orf15Q96N68 181 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 LINC01587Q99440 93 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 TMEM208Q9BTX3 173 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 SELENOKQ9Y6D0 94 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 DNAH17Q9UFH2 4485 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 MUC4Q99102 2169 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 IGHV1-24A0A0C4DH33 117 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 NPYP01303 97 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 GIG44P09565 113 aaPredicted RBP4.94□□□□□ -1.62
VPS13A-201ENST00000355766 SUMO2P61956 95 aaKnown RBP4.94□□□□□ -1.62
VPS13A-201ENST00000355766 S100A12P80511 92 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 ZNF876PQ49A33 203 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 SPATA12Q7Z6I5 190 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 C1orf158Q8N1D5 194 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 PHLDA1Q8WV24 401 aaPredicted RBP4.94□□□□□ -1.62
VPS13A-201ENST00000355766 SMIM2Q9BVW6 85 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 CSTL1Q9H114 145 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 MDFICQ9P1T7 246 aa4.94□□□□□ -1.62
VPS13A-201ENST00000355766 IGLV2-18A0A075B6J9 118 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 TRBV27A0A0K0K1C4 114 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 C20orf202A1L168 122 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 HBDP02042 147 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 CRYGDP07320 174 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 ORMDL2Q53FV1 153 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 PDZD11Q5EBL8 140 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 PYY3Q5JQD4 70 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 UFSP1Q6NVU6 142 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 C14orf178Q8N769 122 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-201ENST00000355766 URB1-AS1Q96HZ7 61 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 C12orf57Q99622 126 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 XCL2Q9UBD3 114 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 TP53TG1Q9Y2A0 90 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 TIMM8BQ9Y5J9 83 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-201ENST00000355766 PKD1P98161 4303 aa4.93□□□□□ -1.62
VPS13A-201ENST00000355766 MUC21A0A0G2JKD1 596 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 TRBV10-1A0A0K0K1A3 114 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 MUC21A0A140T8X8 626 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 TEX48A0A1B0GUV7 120 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 M0QY20 66 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 RS1O15537 224 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 SPRY2O43597 315 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 NUPR1O60356 82 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 LEPROTL1O95214 131 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 BTF3P20290 206 aaKnown RBP4.92□□□□□ -1.62
VPS13A-201ENST00000355766 IFI27P40305 119 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-201ENST00000355766 LAGE3Q14657 143 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 PMCHL1Q16048 86 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 RRN3P1Q2M238 152 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 DNAJC30Q96LL9 226 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 KIR2DL4Q99706 377 aa4.92□□□□□ -1.62
VPS13A-201ENST00000355766 TRAV4A0A0B4J268 109 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 VCYO14598 125 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 ATP5LO75964 103 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 NCR2O95944 276 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 IGHV3-53P01767 116 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 MGPP08493 103 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 FCER1GP30273 86 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 FXYD7P58549 80 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 RHOHQ15669 191 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 ZNF56Q15929 161 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 CFAP126Q5VTH2 177 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 PET117Q6UWS5 81 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 LINC00612Q8N6U2 182 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 TMEM70Q9BUB7 260 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 MAP1LC3CQ9BXW4 147 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 NIT2Q9NQR4 276 aa4.91□□□□□ -1.62
VPS13A-201ENST00000355766 PLAC8L1A1L4L8 177 aa4.9□□□□□ -1.63
VPS13A-201ENST00000355766 LYRM9A8MSI8 78 aa4.9□□□□□ -1.63
VPS13A-201ENST00000355766 SYS1-DBNDD2H3BUS1 97 aa4.9□□□□□ -1.63
VPS13A-201ENST00000355766 MIFP14174 115 aa4.9□□□□□ -1.63
VPS13A-201ENST00000355766 RPL35AP18077 110 aaKnown RBP4.9□□□□□ -1.63
VPS13A-201ENST00000355766 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.63
VPS13A-201ENST00000355766 TCTAP57738 103 aa4.9□□□□□ -1.63
VPS13A-201ENST00000355766 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
VPS13A-201ENST00000355766 DEFB135Q30KP9 77 aa4.9□□□□□ -1.63
VPS13A-201ENST00000355766 TEX43Q6ZNM6 134 aa4.9□□□□□ -1.63
VPS13A-201ENST00000355766 RNF183Q96D59 192 aa4.9□□□□□ -1.63
VPS13A-201ENST00000355766 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 A0A087WWL8 130 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 A0A096LNJ9 63 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 TRAV26-2A0A0B4J265 109 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 SDHAF1A6NFY7 115 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 RTL8CO15255 209 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 C3orf79P0CE67 100 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 AZU1P20160 251 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 SSTP61278 116 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 FAM74A4Q5TZK3 123 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 FAM19A2Q8N3H0 131 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 MAPKAPK5-AS1Q8N8E1 139 aa4.89□□□□□ -1.63
VPS13A-201ENST00000355766 TRGV1A0A0A0MS02 117 aa4.88□□□□□ -1.63
VPS13A-201ENST00000355766 TRBV6-4A0A1B0GX49 114 aa4.88□□□□□ -1.63
VPS13A-201ENST00000355766 TSTD3H0UI37 97 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms