RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 A0A087WWL8 130 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 H7C1H1 209 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 M0QY20 66 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 RHODO00212 210 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 SAP30O75446 220 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 COX8AP10176 69 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 NUTF2P61970 127 aaKnown RBP5.9□□□□□ -1.46
CD44-205ENST00000352818 RHOHQ15669 191 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 ZNF56Q15929 161 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 ZNF876PQ49A33 203 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 UFSP1Q6NVU6 142 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 C18orf15Q96N68 181 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 CSTL1Q9H114 145 aa5.9□□□□□ -1.46
CD44-205ENST00000352818 A0A087WX48 190 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.89□□□□□ -1.47
CD44-205ENST00000352818 DLEU1O43261 78 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 DPM2O94777 84 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 IGKCP01834 107 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 PRSS1P07477 247 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 MORN3Q6PF18 240 aaPredicted RBP5.89□□□□□ -1.47
CD44-205ENST00000352818 C2orf66Q6UXQ4 117 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 Q8N1X5 172 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 LINC01587Q99440 93 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 KIR2DL4Q99706 377 aa5.89□□□□□ -1.47
CD44-205ENST00000352818 SDHAF1A6NFY7 115 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 F5H697 171 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 FGF6P10767 208 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 PLNP26678 52 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 INSL3P51460 131 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 ANKRD39Q53RE8 183 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 FAM74A4Q5TZK3 123 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 ZFP2Q6ZN57 461 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 ERASQ7Z444 233 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 C1orf158Q8N1D5 194 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 TMEM141Q96I45 108 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 SCGB3A1Q96QR1 104 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 TIMM17AQ99595 171 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 C1QTNF4Q9BXJ3 329 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 DKK2Q9UBU2 259 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 CYSLTR1Q9Y271 337 aa5.88□□□□□ -1.47
CD44-205ENST00000352818 F8VRH5 84 aa5.87□□□□□ -1.47
CD44-205ENST00000352818 SIVA1O15304 175 aa5.87□□□□□ -1.47
CD44-205ENST00000352818 RS1O15537 224 aa5.87□□□□□ -1.47
CD44-205ENST00000352818 COL5A1-AS1Q5SY13 56 aa5.87□□□□□ -1.47
CD44-205ENST00000352818 LINC00336Q6ZUF6 198 aa5.87□□□□□ -1.47
CD44-205ENST00000352818 BOD1L2Q8IYS8 172 aa5.87□□□□□ -1.47
CD44-205ENST00000352818 NEXN-AS1Q8NBZ9 246 aa5.87□□□□□ -1.47
CD44-205ENST00000352818 RNASE8Q8TDE3 154 aaKnown RBP5.87□□□□□ -1.47
CD44-205ENST00000352818 TMEM263Q8WUH6 116 aaKnown RBP5.87□□□□□ -1.47
CD44-205ENST00000352818 HHLA3Q9XRX5 114 aa5.87□□□□□ -1.47
CD44-205ENST00000352818 I3L3M4 83 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 IGHV3-53P01767 116 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 GIG44P09565 113 aaPredicted RBP5.86□□□□□ -1.47
CD44-205ENST00000352818 NPSP0C0P6 89 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 CFAP126Q5VTH2 177 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 CEMP1Q6PRD7 247 aaPredicted RBP5.86□□□□□ -1.47
CD44-205ENST00000352818 BAALCQ8WXS3 180 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 DNAJC30Q96LL9 226 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 XCL2Q9UBD3 114 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 TP53TG1Q9Y2A0 90 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 VPS13BQ7Z7G8 4022 aa5.86□□□□□ -1.47
CD44-205ENST00000352818 FLG2Q5D862 2391 aaPredicted RBP5.86□□□□□ -1.47
CD44-205ENST00000352818 IGIPA6NJ69 53 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 RTL8CO15255 209 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 CIDEAO60543 219 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 CDK2AP2O75956 126 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 TSHBP01222 138 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 DAZ2Q13117 558 aaKnown RBP5.85□□□□□ -1.47
CD44-205ENST00000352818 PAPPA-AS1Q5QFB9 102 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 C2orf91Q6ZV80 131 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 NEGR1Q7Z3B1 354 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 STPG4Q8N801 248 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 C16orf74Q96GX8 76 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 TMEM208Q9BTX3 173 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 MRPL35Q9NZE8 188 aaKnown RBP5.85□□□□□ -1.47
CD44-205ENST00000352818 CHTOPQ9Y3Y2 248 aaKnown RBP5.85□□□□□ -1.47
CD44-205ENST00000352818 NACAE9PAV3 2078 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
CD44-205ENST00000352818 TRAV4A0A0B4J268 109 aa5.84□□□□□ -1.47
CD44-205ENST00000352818 A0A1B0GV90 55 aa5.84□□□□□ -1.47
CD44-205ENST00000352818 HTN1P15515 57 aa5.84□□□□□ -1.47
CD44-205ENST00000352818 C20orf203Q8NBC4 194 aa5.84□□□□□ -1.47
CD44-205ENST00000352818 CSNK1G2-AS1Q8NCQ2 148 aa5.84□□□□□ -1.47
CD44-205ENST00000352818 HIGD1BQ9P298 99 aa5.84□□□□□ -1.47
CD44-205ENST00000352818 TRBV10-1A0A0K0K1A3 114 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 NUPR2A6NF83 97 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 PRSS29PA6NIE9 313 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 AZU1P20160 251 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 CRYBA4P53673 196 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 PMVKQ15126 192 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 ZC2HC1BQ5TFG8 222 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 OVOL2Q9BRP0 275 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 MRPL16Q9NX20 251 aaKnown RBP5.83□□□□□ -1.48
CD44-205ENST00000352818 PYGO1Q9Y3Y4 419 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 TNFRSF18Q9Y5U5 241 aa5.83□□□□□ -1.48
CD44-205ENST00000352818 PLAC8L1A1L4L8 177 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 PRM2P04554 102 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 P0DMU3 169 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 FAM231AP0DMU4 169 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 FAM231CP0DMU5 169 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms