RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 MUSTN1Q8IVN3 82 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 ZNRF2Q8NHG8 242 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 ITLN2Q8WWU7 325 aaPredicted RBP5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 METTL26Q96S19 204 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 LENEPQ9Y5L5 61 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 ICOSQ9Y6W8 199 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 ASH1LQ9NR48 2969 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 UBR5O95071 2799 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 IGHV3-72A0A0B4J1Y9 119 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 TMEM223A0PJW6 202 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 LST1O00453 97 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 CNTFRP26992 372 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 TMEM258P61165 79 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 AMELXQ99217 191 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 CTSZQ9UBR2 303 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 LRBAP50851 2863 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 MALRD1Q5VYJ5 2156 aa5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 SPTAN1Q13813 2472 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-204ENST00000349311 IGLV11-55A0A075B6I3 123 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 IGIPA6NJ69 53 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 IGHV1-69P01742 117 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 TRACP01848 142 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 CRYGDP07320 174 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 IGHV4-30-4P0DP06 118 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 ZNF876PQ49A33 203 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 C3orf56Q8N813 242 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 LINC01560Q8TB33 94 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 MRAPQ8TCY5 172 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 TP53TG1Q9Y2A0 90 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 SMAD5-AS1Q9Y6J3 95 aa5.69□□□□□ -1.5
UBE2D3-204ENST00000349311 RELNP78509 3460 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 FLNBO75369 2602 aaKnown RBP5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 ZNF462Q96JM2 2506 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 COL12A1Q99715 3063 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 OOSP1A8MZH6 123 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 VCYO14598 125 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 MGPP08493 103 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 PRB4P10163 310 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 DUX3Q96PT4 197 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 AGPAT4-IT1Q9H0P7 198 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 DYNLRB1Q9NP97 96 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 KAAG1Q9UBP8 84 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 LRRK2Q5S007 2527 aa5.68□□□□□ -1.5
UBE2D3-204ENST00000349311 DCHS2Q6V1P9 2916 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 IGHV4OR15-8A0A075B7B6 117 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 A0A087WW49 117 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 TRAV21A0A0B4J279 112 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 LOC107984640A0A0U1RRK4 108 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 PRAC2D3DTV9 90 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 USP17L23D6RBM5 183 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 TMEM178BH3BS89 294 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 BUB1B-PAK6H3BSN5 160 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 NBR2O15453 112 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 IGLV1-47P01700 117 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 RHOHQ15669 191 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 C11orf71Q6IPW1 123 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 C5orf38Q86SI9 138 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 DAND5Q8N907 189 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 RPL39LQ96EH5 51 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 LINC00527Q9UJ94 153 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 NBPF19A0A087WUL8 3843 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 WNK2Q9Y3S1 2297 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 ARHGAP32A7KAX9 2087 aa5.67□□□□□ -1.5
UBE2D3-204ENST00000349311 A0A0J9YXY3 114 aa5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 A0A1B0GUV1 79 aa5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 TSHBP01222 138 aa5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 S100A4P26447 101 aaKnown RBP5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 C14orf178Q8N769 122 aaPredicted RBP5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 NPBQ8NG41 125 aa5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 EDA2RQ9HAV5 297 aa5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 PHLDA3Q9Y5J5 127 aa5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 AKAP6Q13023 2319 aa5.66□□□□□ -1.5
UBE2D3-204ENST00000349311 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 OVOL1O14753 267 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 TIMM17BO60830 172 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 NXPH4O95158 308 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 INAFM2P0DMQ5 153 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 UBE2E1P51965 193 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 HIST1H4AP62805 103 aaKnown RBP5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 CCL8P80075 99 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 SDIM1Q6ZPB5 146 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 LINC00477Q96M19 166 aa5.65□□□□□ -1.5
UBE2D3-204ENST00000349311 TRBV6-5A0A0K0K1A5 114 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 F5H768 121 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 LY6LH3BQJ8 138 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 ZNF22P17026 224 aaPredicted RBP5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 POLR2KP53803 58 aaKnown RBP5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 MIAQ16674 131 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 NSUN5P1Q3KNT7 163 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 HIST2H2BCQ6DN03 193 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 HIST2H2BDQ6DRA6 164 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 LYPD2Q6UXB3 125 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 C9orf139Q6ZV77 190 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 GPHB5Q86YW7 130 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 ZNF843Q8N446 348 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 DCANP1Q8TF63 244 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 COPS9Q8WXC6 57 aa5.64□□□□□ -1.51
UBE2D3-204ENST00000349311 C2orf48Q96LS8 159 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms