RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TMEM89A2RUT3 159 aa13.15□□□□□ -0.31
SPAST-202ENST00000345662 NDUFA1O15239 70 aa13.15□□□□□ -0.31
SPAST-202ENST00000345662 ODF3BA8MYP8 253 aa13.14□□□□□ -0.31
SPAST-202ENST00000345662 LST1O00453 97 aa13.14□□□□□ -0.31
SPAST-202ENST00000345662 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
SPAST-202ENST00000345662 HHLA3Q9XRX5 114 aa13.14□□□□□ -0.31
SPAST-202ENST00000345662 LINC00467Q9BRT7 94 aa13.14□□□□□ -0.31
SPAST-202ENST00000345662 WISP2O76076 250 aa13.14□□□□□ -0.31
SPAST-202ENST00000345662 TRBV27A0A0K0K1C4 114 aa13.13□□□□□ -0.31
SPAST-202ENST00000345662 COX7CP15954 63 aa13.13□□□□□ -0.31
SPAST-202ENST00000345662 SPAG11BQ08648 103 aa13.13□□□□□ -0.31
SPAST-202ENST00000345662 ENHOQ6UWT2 76 aa13.13□□□□□ -0.31
SPAST-202ENST00000345662 ZFAND2AQ8N6M9 145 aa13.13□□□□□ -0.31
SPAST-202ENST00000345662 M0QY20 66 aa13.13□□□□□ -0.31
SPAST-202ENST00000345662 DEFB121Q5J5C9 76 aa13.13□□□□□ -0.31
SPAST-202ENST00000345662 RPL18AQ02543 176 aaKnown RBP13.12□□□□□ -0.31
SPAST-202ENST00000345662 C20orf173Q96LM9 149 aa13.12□□□□□ -0.31
SPAST-202ENST00000345662 ZFAND3Q9H8U3 227 aa13.12□□□□□ -0.31
SPAST-202ENST00000345662 KIAA1549Q9HCM3 1950 aa13.11□□□□□ -0.31
SPAST-202ENST00000345662 DAZAP2Q15038 168 aaPredicted RBP13.11□□□□□ -0.31
SPAST-202ENST00000345662 NDUFC2-KCTD14E9PQ53 114 aa13.11□□□□□ -0.31
SPAST-202ENST00000345662 TIMM17BO60830 172 aa13.11□□□□□ -0.31
SPAST-202ENST00000345662 TRBV6-5A0A0K0K1A5 114 aa13.11□□□□□ -0.31
SPAST-202ENST00000345662 Q6ZS46 218 aa13.11□□□□□ -0.31
SPAST-202ENST00000345662 ZMAT4Q9H898 229 aa13.11□□□□□ -0.31
SPAST-202ENST00000345662 USP17L23D6RBM5 183 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 TIRAPP58753 221 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 TMEM263Q8WUH6 116 aaKnown RBP13.1□□□□□ -0.31
SPAST-202ENST00000345662 A0A1W2PNU3 283 aaPredicted RBP13.1□□□□□ -0.31
SPAST-202ENST00000345662 LRRC75A-AS1Q8N1F1 130 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 MPLKIPQ8TAP9 179 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 LINC01548A6NM66 108 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 GAS8-AS1O95177 125 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 PIK3CD-AS1Q5SR53 167 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 FAM110AQ9BQ89 295 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 PYGO1Q9Y3Y4 419 aa13.1□□□□□ -0.31
SPAST-202ENST00000345662 IGHV4-30-2A0A087WSY4 118 aa13.09□□□□□ -0.31
SPAST-202ENST00000345662 COX7BP24311 80 aa13.09□□□□□ -0.31
SPAST-202ENST00000345662 HCFC1P51610 2035 aa13.09□□□□□ -0.31
SPAST-202ENST00000345662 SLPIP03973 132 aa13.09□□□□□ -0.31
SPAST-202ENST00000345662 BPY2O14599 106 aa13.09□□□□□ -0.31
SPAST-202ENST00000345662 ANKHD1Q8IWZ3 2542 aaKnown RBP13.08□□□□□ -0.31
SPAST-202ENST00000345662 IGF2-ASQ6U949 168 aa13.08□□□□□ -0.32
SPAST-202ENST00000345662 NDUFB1O75438 58 aa13.08□□□□□ -0.32
SPAST-202ENST00000345662 CNFNQ9BYD5 112 aa13.08□□□□□ -0.32
SPAST-202ENST00000345662 H7C423 109 aa13.08□□□□□ -0.32
SPAST-202ENST00000345662 WNK1Q9H4A3 2382 aa13.08□□□□□ -0.32
SPAST-202ENST00000345662 C10orf105Q8TEF2 133 aa13.08□□□□□ -0.32
SPAST-202ENST00000345662 PKIGQ9Y2B9 76 aa13.08□□□□□ -0.32
SPAST-202ENST00000345662 FAM240AA0A1B0GVK7 77 aa13.07□□□□□ -0.32
SPAST-202ENST00000345662 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
SPAST-202ENST00000345662 C11orf21Q9P2W6 132 aa13.07□□□□□ -0.32
SPAST-202ENST00000345662 PCDH15Q96QU1 1955 aa13.06□□□□□ -0.32
SPAST-202ENST00000345662 PRR14LQ5THK1 2151 aa13.06□□□□□ -0.32
SPAST-202ENST00000345662 NUP210LQ5VU65 1888 aa13.06□□□□□ -0.32
SPAST-202ENST00000345662 A6NDX4 124 aa13.06□□□□□ -0.32
SPAST-202ENST00000345662 SPART-AS1P0CW21 52 aa13.05□□□□□ -0.32
SPAST-202ENST00000345662 LY6LH3BQJ8 138 aa13.05□□□□□ -0.32
SPAST-202ENST00000345662 FAM222AQ5U5X8 452 aa13.05□□□□□ -0.32
SPAST-202ENST00000345662 K7EQG2 157 aa13.05□□□□□ -0.32
SPAST-202ENST00000345662 ESM1Q9NQ30 184 aa13.05□□□□□ -0.32
SPAST-202ENST00000345662 A0A0U1RQV1 116 aa13.05□□□□□ -0.32
SPAST-202ENST00000345662 LINC00694P0DN24 101 aa13.04□□□□□ -0.32
SPAST-202ENST00000345662 POLR2KP53803 58 aaKnown RBP13.04□□□□□ -0.32
SPAST-202ENST00000345662 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
SPAST-202ENST00000345662 A8MZ25 164 aa13.04□□□□□ -0.32
SPAST-202ENST00000345662 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
SPAST-202ENST00000345662 UBE2D1P51668 147 aa13.03□□□□□ -0.32
SPAST-202ENST00000345662 EBI3Q14213 229 aa13.03□□□□□ -0.32
SPAST-202ENST00000345662 TSHBP01222 138 aa13.03□□□□□ -0.32
SPAST-202ENST00000345662 NDUFC1O43677 76 aa13.03□□□□□ -0.32
SPAST-202ENST00000345662 CHKB-CPT1BH3BT56 60 aa13.02□□□□□ -0.32
SPAST-202ENST00000345662 ATP5EP56381 51 aaPredicted RBP13.02□□□□□ -0.32
SPAST-202ENST00000345662 Q6ZTI0 123 aa13.02□□□□□ -0.32
SPAST-202ENST00000345662 V9GYY9 64 aa13.02□□□□□ -0.32
SPAST-202ENST00000345662 TANC2Q9HCD6 1990 aa13.02□□□□□ -0.33
SPAST-202ENST00000345662 M0QXV9 152 aa13.02□□□□□ -0.33
SPAST-202ENST00000345662 PRO0255Q9UI72 69 aa13.02□□□□□ -0.33
SPAST-202ENST00000345662 ADORA2A-AS1P86434 159 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 KLK12Q9UKR0 248 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 FSTL3O95633 263 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 PTPRQQ9UMZ3 2332 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 C4orf3Q8WVX3 66 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 SPG11Q96JI7 2443 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 UBE2D3P61077 147 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 UBE2D2P62837 147 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 SCXQ7RTU7 201 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 SVIPQ8NHG7 77 aa13.01□□□□□ -0.33
SPAST-202ENST00000345662 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
SPAST-202ENST00000345662 FBXL19-AS1Q494R0 122 aa13□□□□□ -0.33
SPAST-202ENST00000345662 PRR9Q5T870 116 aa13□□□□□ -0.33
SPAST-202ENST00000345662 FAM208BQ5VWN6 2430 aa12.99□□□□□ -0.33
SPAST-202ENST00000345662 CLPSL1A2RUU4 121 aa12.99□□□□□ -0.33
SPAST-202ENST00000345662 TTC28Q96AY4 2481 aa12.99□□□□□ -0.33
SPAST-202ENST00000345662 SPTSSBQ8NFR3 76 aa12.99□□□□□ -0.33
SPAST-202ENST00000345662 C22orf34Q6ZV56 151 aa12.98□□□□□ -0.33
SPAST-202ENST00000345662 MRPL55Q7Z7F7 128 aaKnown RBP12.98□□□□□ -0.33
SPAST-202ENST00000345662 ZFHX2Q9C0A1 2572 aaPredicted RBP12.97□□□□□ -0.33
SPAST-202ENST00000345662 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms