RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 COL27A1Q8IZC6 1860 aaPredicted RBP3.59□□□□□ -1.84
CSMD3-203ENST00000343508 SERP2Q8N6R1 65 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 UBE2D4Q9Y2X8 147 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 IGLV4-69A0A075B6H9 119 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 AGRNO00468 2067 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 WISP2O76076 250 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 CITED2Q99967 270 aaPredicted RBP3.58□□□□□ -1.84
CSMD3-203ENST00000343508 ARHGAP32A7KAX9 2087 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 APOC4P55056 127 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
CSMD3-203ENST00000343508 Q8N6K4 173 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 KLLNB2CW77 178 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 GAS8-AS1O95177 125 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 GNLYP22749 145 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 C5orf38Q86SI9 138 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 CEP290O15078 2479 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 F8WEM9 126 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 FAM110AQ9BQ89 295 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 APRG1Q8IVJ8 170 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 C20orf173Q96LM9 149 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 TRAV25A0A0B4J276 109 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 TRBV12-3P01733 135 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 FUSP35637 526 aaKnown RBP eCLIP3.58□□□□□ -1.84
CSMD3-203ENST00000343508 LINC00467Q9BRT7 94 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 UPK3BQ9BT76 320 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 TNFRSF13BO14836 293 aaPredicted RBP3.58□□□□□ -1.84
CSMD3-203ENST00000343508 NKAPP1Q8N9T2 125 aa3.58□□□□□ -1.84
CSMD3-203ENST00000343508 FAM222AQ5U5X8 452 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 CEMP1Q6PRD7 247 aaPredicted RBP3.57□□□□□ -1.84
CSMD3-203ENST00000343508 CEP250Q9BV73 2442 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 CCL24O00175 119 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 IGHV4-59P01825 116 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 DEFB112Q30KQ8 113 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 C3orf56Q8N813 242 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 Q9HAA7 133 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 IBA57-AS1B1ANH7 110 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 GRNP28799 593 aaKnown RBP3.57□□□□□ -1.84
CSMD3-203ENST00000343508 CDIP1Q9H305 208 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 TSHBP01222 138 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 IGHV4-38-2P0DP08 117 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 HTN3P15516 51 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 C4orf3Q8WVX3 66 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 C11orf21Q9P2W6 132 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 C22orf34Q6ZV56 151 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 WNK2Q9Y3S1 2297 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 CLPSL1A2RUU4 121 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 NBL1P41271 181 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 TRAV23DV6A0A075B6W5 121 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 CRIP2P52943 208 aaPredicted RBP3.57□□□□□ -1.84
CSMD3-203ENST00000343508 DAD1P61803 113 aa3.57□□□□□ -1.84
CSMD3-203ENST00000343508 ADORA2A-AS1P86434 159 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 C9orf85Q96MD7 179 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 FAM236DA0A1B0GTK5 79 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 FAM236CP0DP71 79 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 NAV3Q8IVL0 2385 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 K7EQG2 157 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 CLPSL2Q6UWE3 100 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 DPH3Q96FX2 82 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 SLURP1P55000 103 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 DCANP1Q8TF63 244 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 CRYGDP07320 174 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 COX17Q14061 63 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 ZNF318Q5VUA4 2279 aa3.56□□□□□ -1.84
CSMD3-203ENST00000343508 PRRC2AP48634 2157 aaKnown RBP3.56□□□□□ -1.84
CSMD3-203ENST00000343508 DEFB1P60022 68 aa3.55□□□□□ -1.84
CSMD3-203ENST00000343508 NREPQ16612 68 aa3.55□□□□□ -1.84
CSMD3-203ENST00000343508 MAP6D1Q9H9H5 199 aa3.55□□□□□ -1.84
CSMD3-203ENST00000343508 IGHV4-61A0A0C4DH41 118 aa3.55□□□□□ -1.84
CSMD3-203ENST00000343508 A6NDX4 124 aa3.55□□□□□ -1.84
CSMD3-203ENST00000343508 F8W735 103 aaPredicted RBP3.55□□□□□ -1.84
CSMD3-203ENST00000343508 PKDREJQ9NTG1 2253 aa3.55□□□□□ -1.84
CSMD3-203ENST00000343508 RNF223E7ERA6 249 aa3.55□□□□□ -1.84
CSMD3-203ENST00000343508 RP1L1Q8IWN7 2480 aaPredicted RBP3.55□□□□□ -1.84
CSMD3-203ENST00000343508 RPL28P46779 137 aaKnown RBP3.55□□□□□ -1.84
CSMD3-203ENST00000343508 C11orf71Q6IPW1 123 aa3.55□□□□□ -1.84
CSMD3-203ENST00000343508 DEFB136Q30KP8 78 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 PRR9Q5T870 116 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 C10orf105Q8TEF2 133 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 DIRC1Q969H9 104 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 TRBV7-7A0A0K0K1E9 115 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 NDUFC2-KCTD14E9PQ53 114 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 C20orf197Q8N268 126 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 SMIM11BQ8TCY0 68 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 ENHOQ6UWT2 76 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 LINC01548A6NM66 108 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 F5H768 121 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 NCR3O14931 201 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 REV3LO60673 3130 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 Q8NA96 180 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 GYPEP15421 78 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 PRO0461Q9UI25 63 aa3.54□□□□□ -1.84
CSMD3-203ENST00000343508 TRBV6-4A0A1B0GX49 114 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 CDK2AP2O75956 126 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 FAM19A5Q7Z5A7 132 aaPredicted RBP3.53□□□□□ -1.84
CSMD3-203ENST00000343508 AMELXQ99217 191 aa3.53□□□□□ -1.84
CSMD3-203ENST00000343508 DCHS1Q96JQ0 3298 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms