RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 GAGE12IP0CL82 117 aa13.48□□□□□ -0.25
EGFR-202ENST00000342916 Q6ZN92 141 aa13.48□□□□□ -0.25
EGFR-202ENST00000342916 UQCR10Q9UDW1 63 aa13.48□□□□□ -0.25
EGFR-202ENST00000342916 TP73-AS1Q9UF72 201 aa13.48□□□□□ -0.25
EGFR-202ENST00000342916 IGIPA6NJ69 53 aa13.48□□□□□ -0.25
EGFR-202ENST00000342916 A0A087WX48 190 aa13.47□□□□□ -0.25
EGFR-202ENST00000342916 G0S2P27469 103 aa13.47□□□□□ -0.25
EGFR-202ENST00000342916 EMP1P54849 157 aa13.47□□□□□ -0.25
EGFR-202ENST00000342916 SBSPONQ8IVN8 264 aa13.47□□□□□ -0.25
EGFR-202ENST00000342916 STPG4Q8N801 248 aa13.47□□□□□ -0.25
EGFR-202ENST00000342916 BAALCQ8WXS3 180 aa13.47□□□□□ -0.25
EGFR-202ENST00000342916 MRPL35Q9NZE8 188 aaKnown RBP13.47□□□□□ -0.25
EGFR-202ENST00000342916 HUWE1Q7Z6Z7 4374 aaKnown RBP13.47□□□□□ -0.25
EGFR-202ENST00000342916 ANKRD39Q53RE8 183 aa13.47□□□□□ -0.25
EGFR-202ENST00000342916 DNAH9Q9NYC9 4486 aa13.46□□□□□ -0.25
EGFR-202ENST00000342916 TRAV12-1A0A0B4J245 112 aa13.46□□□□□ -0.25
EGFR-202ENST00000342916 DNAJC30Q96LL9 226 aa13.46□□□□□ -0.25
EGFR-202ENST00000342916 TRGV2A0A075B6R0 118 aa13.45□□□□□ -0.26
EGFR-202ENST00000342916 SNHG12Q9BXW3 62 aa13.45□□□□□ -0.26
EGFR-202ENST00000342916 C20orf203Q8NBC4 194 aa13.45□□□□□ -0.26
EGFR-202ENST00000342916 HHLA3Q9XRX5 114 aa13.45□□□□□ -0.26
EGFR-202ENST00000342916 LINC01549A6NIU2 74 aa13.44□□□□□ -0.26
EGFR-202ENST00000342916 DPM2O94777 84 aa13.44□□□□□ -0.26
EGFR-202ENST00000342916 IGKCP01834 107 aa13.44□□□□□ -0.26
EGFR-202ENST00000342916 K7EQD1 137 aa13.44□□□□□ -0.26
EGFR-202ENST00000342916 SLC25A29Q8N8R3 303 aa13.44□□□□□ -0.26
EGFR-202ENST00000342916 IGHV3-38A0A0C4DH36 116 aa13.43□□□□□ -0.26
EGFR-202ENST00000342916 TCTAP57738 103 aa13.43□□□□□ -0.26
EGFR-202ENST00000342916 TIMM17AQ99595 171 aa13.43□□□□□ -0.26
EGFR-202ENST00000342916 PHLDA1Q8WV24 401 aaPredicted RBP13.43□□□□□ -0.26
EGFR-202ENST00000342916 SMIM9A6NGZ8 99 aa13.42□□□□□ -0.26
EGFR-202ENST00000342916 PRSS29PA6NIE9 313 aa13.42□□□□□ -0.26
EGFR-202ENST00000342916 M0R143 59 aa13.42□□□□□ -0.26
EGFR-202ENST00000342916 ZC2HC1BQ5TFG8 222 aa13.42□□□□□ -0.26
EGFR-202ENST00000342916 F8VRH5 84 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 OR11H2Q8NH07 326 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 ZNRF2Q8NHG8 242 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 RNF183Q96D59 192 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 TMEM141Q96I45 108 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 TRBV7-3A0A075B6L6 115 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 TRBV10-1A0A0K0K1A3 114 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 DEFB4AO15263 64 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 LINC00612Q8N6U2 182 aa13.41□□□□□ -0.26
EGFR-202ENST00000342916 CHTOPQ9Y3Y2 248 aaKnown RBP13.41□□□□□ -0.26
EGFR-202ENST00000342916 MRPL52Q86TS9 123 aaKnown RBP13.4□□□□□ -0.26
EGFR-202ENST00000342916 OPRPNQ99935 248 aaPredicted RBP13.4□□□□□ -0.26
EGFR-202ENST00000342916 CHCHD7Q9BUK0 85 aa13.4□□□□□ -0.26
EGFR-202ENST00000342916 FBN3Q75N90 2809 aa13.4□□□□□ -0.26
EGFR-202ENST00000342916 HNRNPA3P51991 378 aaKnown RBP13.4□□□□□ -0.26
EGFR-202ENST00000342916 DEFB130BP0DP73 79 aa13.39□□□□□ -0.27
EGFR-202ENST00000342916 DEFB130AP0DP74 79 aa13.39□□□□□ -0.27
EGFR-202ENST00000342916 COX8AP10176 69 aa13.39□□□□□ -0.27
EGFR-202ENST00000342916 PLNP26678 52 aa13.39□□□□□ -0.27
EGFR-202ENST00000342916 SLC25A34Q6PIV7 304 aa13.39□□□□□ -0.27
EGFR-202ENST00000342916 RPL36AP83881 106 aaKnown RBP13.38□□□□□ -0.27
EGFR-202ENST00000342916 FHL2Q14192 279 aa13.38□□□□□ -0.27
EGFR-202ENST00000342916 RPL36ALQ969Q0 106 aaKnown RBP13.38□□□□□ -0.27
EGFR-202ENST00000342916 CST9LQ9H4G1 147 aa13.38□□□□□ -0.27
EGFR-202ENST00000342916 CIDEAO60543 219 aa13.37□□□□□ -0.27
EGFR-202ENST00000342916 FGF6P10767 208 aa13.37□□□□□ -0.27
EGFR-202ENST00000342916 COTL1Q14019 142 aa13.37□□□□□ -0.27
EGFR-202ENST00000342916 PMVKQ15126 192 aa13.37□□□□□ -0.27
EGFR-202ENST00000342916 IGKV2D-26A0A0A0MRZ7 120 aa13.37□□□□□ -0.27
EGFR-202ENST00000342916 TRGV4A0A0C4DH28 118 aa13.37□□□□□ -0.27
EGFR-202ENST00000342916 FAM104AQ969W3 186 aa13.37□□□□□ -0.27
EGFR-202ENST00000342916 STAB2Q8WWQ8 2551 aa13.37□□□□□ -0.27
EGFR-202ENST00000342916 LOC100131303A0A0U1RQF7 123 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 TRBV6-4A0A1B0GX49 114 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 GAGE12JA6NER3 117 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 UBE2D3P61077 147 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 UBE2D2P62837 147 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 GAGE1Q13065 139 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 GAGE4Q13068 117 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 GAGE5Q13069 117 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 IGLV4-69A0A075B6H9 119 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 IGLV4-3A0A075B6K6 122 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 IGHV4-28A0A0C4DH34 117 aa13.36□□□□□ -0.27
EGFR-202ENST00000342916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.35□□□□□ -0.27
EGFR-202ENST00000342916 IGKV2-29A2NJV5 120 aaPredicted RBP13.35□□□□□ -0.27
EGFR-202ENST00000342916 NMUP48645 174 aa13.35□□□□□ -0.27
EGFR-202ENST00000342916 FAM222AQ5U5X8 452 aa13.35□□□□□ -0.27
EGFR-202ENST00000342916 CEMP1Q6PRD7 247 aaPredicted RBP13.35□□□□□ -0.27
EGFR-202ENST00000342916 Q8NAQ8 132 aa13.35□□□□□ -0.27
EGFR-202ENST00000342916 MRPS16Q9Y3D3 137 aaKnown RBP13.35□□□□□ -0.27
EGFR-202ENST00000342916 PCP2Q8IVA1 136 aa13.35□□□□□ -0.27
EGFR-202ENST00000342916 TM2D3Q9BRN9 247 aa13.35□□□□□ -0.27
EGFR-202ENST00000342916 PYGO1Q9Y3Y4 419 aa13.35□□□□□ -0.27
EGFR-202ENST00000342916 DAZ4Q86SG3 579 aaKnown RBP13.33□□□□□ -0.27
EGFR-202ENST00000342916 DAZ3Q9NR90 486 aaKnown RBP13.33□□□□□ -0.27
EGFR-202ENST00000342916 NTM-AS1Q6ZSK4 140 aa13.33□□□□□ -0.28
EGFR-202ENST00000342916 BOD1L2Q8IYS8 172 aa13.33□□□□□ -0.28
EGFR-202ENST00000342916 UBE2D4Q9Y2X8 147 aa13.33□□□□□ -0.28
EGFR-202ENST00000342916 C11orf86A6NJI1 115 aa13.32□□□□□ -0.28
EGFR-202ENST00000342916 LYRM9A8MSI8 78 aa13.32□□□□□ -0.28
EGFR-202ENST00000342916 C2orf91Q6ZV80 131 aa13.32□□□□□ -0.28
EGFR-202ENST00000342916 TGP01266 2768 aa13.32□□□□□ -0.28
EGFR-202ENST00000342916 MIFP14174 115 aa13.32□□□□□ -0.28
EGFR-202ENST00000342916 B9D2Q9BPU9 175 aa13.32□□□□□ -0.28
EGFR-202ENST00000342916 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms