RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 CHCHD1Q96BP2 118 aaKnown RBP9.67□□□□□ -0.86
PMS1-201ENST00000342075 I3L3M4 83 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 PPP1R17O96001 155 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 LAGE3Q14657 143 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 TRBV10-1A0A0K0K1A3 114 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 TEX48A0A1B0GUV7 120 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 NUDT3O95989 172 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 LINC00694P0DN24 101 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 FCER1GP30273 86 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 CEMP1Q6PRD7 247 aaPredicted RBP9.66□□□□□ -0.86
PMS1-201ENST00000342075 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
PMS1-201ENST00000342075 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.86
PMS1-201ENST00000342075 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.86
PMS1-201ENST00000342075 PLECQ15149 4684 aaKnown RBP9.65□□□□□ -0.86
PMS1-201ENST00000342075 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
PMS1-201ENST00000342075 H0Y8G0 127 aa9.65□□□□□ -0.86
PMS1-201ENST00000342075 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
PMS1-201ENST00000342075 AKR1D1P51857 326 aa9.64□□□□□ -0.87
PMS1-201ENST00000342075 DNAJC30Q96LL9 226 aa9.64□□□□□ -0.87
PMS1-201ENST00000342075 PACRGQ96M98 296 aaPredicted RBP9.64□□□□□ -0.87
PMS1-201ENST00000342075 OPRPNQ99935 248 aaPredicted RBP9.64□□□□□ -0.87
PMS1-201ENST00000342075 CIDEAO60543 219 aa9.64□□□□□ -0.87
PMS1-201ENST00000342075 CHCHD7Q9BUK0 85 aa9.64□□□□□ -0.87
PMS1-201ENST00000342075 ZC2HC1BQ5TFG8 222 aa9.63□□□□□ -0.87
PMS1-201ENST00000342075 SPATA12Q7Z6I5 190 aa9.63□□□□□ -0.87
PMS1-201ENST00000342075 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
PMS1-201ENST00000342075 C2orf66Q6UXQ4 117 aa9.63□□□□□ -0.87
PMS1-201ENST00000342075 HBDP02042 147 aa9.62□□□□□ -0.87
PMS1-201ENST00000342075 COTL1Q14019 142 aa9.62□□□□□ -0.87
PMS1-201ENST00000342075 Q8N3U1 123 aa9.62□□□□□ -0.87
PMS1-201ENST00000342075 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
PMS1-201ENST00000342075 RNASE13Q5GAN3 156 aaKnown RBP9.62□□□□□ -0.87
PMS1-201ENST00000342075 TMEM18Q96B42 140 aa9.62□□□□□ -0.87
PMS1-201ENST00000342075 DYNC2H1Q8NCM8 4307 aaKnown RBP9.61□□□□□ -0.87
PMS1-201ENST00000342075 LEPROTL1O95214 131 aa9.61□□□□□ -0.87
PMS1-201ENST00000342075 NHLRC4P0CG21 123 aaPredicted RBP9.61□□□□□ -0.87
PMS1-201ENST00000342075 KRTDAPP60985 99 aa9.61□□□□□ -0.87
PMS1-201ENST00000342075 DAZ4Q86SG3 579 aaKnown RBP9.61□□□□□ -0.87
PMS1-201ENST00000342075 DAZ3Q9NR90 486 aaKnown RBP9.61□□□□□ -0.87
PMS1-201ENST00000342075 IGLL5B9A064 214 aa9.6□□□□□ -0.87
PMS1-201ENST00000342075 ORMDL2Q53FV1 153 aa9.6□□□□□ -0.87
PMS1-201ENST00000342075 PMCHL2Q9BQD1 86 aa9.6□□□□□ -0.87
PMS1-201ENST00000342075 TRAV10A0A0B4J240 114 aa9.6□□□□□ -0.87
PMS1-201ENST00000342075 CDPF1Q6NVV7 123 aa9.6□□□□□ -0.87
PMS1-201ENST00000342075 C20orf203Q8NBC4 194 aa9.6□□□□□ -0.87
PMS1-201ENST00000342075 ICOSQ9Y6W8 199 aa9.59□□□□□ -0.87
PMS1-201ENST00000342075 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
PMS1-201ENST00000342075 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
PMS1-201ENST00000342075 TRBV6-8A0A0A6YYG3 113 aa9.58□□□□□ -0.88
PMS1-201ENST00000342075 FAM104AQ969W3 186 aa9.58□□□□□ -0.88
PMS1-201ENST00000342075 GAGE6Q13070 117 aa9.58□□□□□ -0.88
PMS1-201ENST00000342075 MRPL23Q16540 153 aaKnown RBP9.58□□□□□ -0.88
PMS1-201ENST00000342075 CYSLTR1Q9Y271 337 aa9.58□□□□□ -0.88
PMS1-201ENST00000342075 SCGB3A1Q96QR1 104 aa9.57□□□□□ -0.88
PMS1-201ENST00000342075 GTSF1LQ9H1H1 148 aa9.57□□□□□ -0.88
PMS1-201ENST00000342075 Q8N976 141 aa9.56□□□□□ -0.88
PMS1-201ENST00000342075 CHCHD5Q9BSY4 110 aa9.56□□□□□ -0.88
PMS1-201ENST00000342075 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
PMS1-201ENST00000342075 ESRGQ1W209 222 aa9.56□□□□□ -0.88
PMS1-201ENST00000342075 PYY3Q5JQD4 70 aa9.56□□□□□ -0.88
PMS1-201ENST00000342075 ZFAND6Q6FIF0 208 aa9.56□□□□□ -0.88
PMS1-201ENST00000342075 LYPD5Q6UWN5 251 aa9.56□□□□□ -0.88
PMS1-201ENST00000342075 IFI27L1Q96BM0 104 aa9.56□□□□□ -0.88
PMS1-201ENST00000342075 TRBV25-1A0A075B6N4 114 aa9.55□□□□□ -0.88
PMS1-201ENST00000342075 ATOH7Q8N100 152 aa9.55□□□□□ -0.88
PMS1-201ENST00000342075 UBE2D4Q9Y2X8 147 aa9.55□□□□□ -0.88
PMS1-201ENST00000342075 K7EMI3 77 aa9.55□□□□□ -0.88
PMS1-201ENST00000342075 DNAH1Q9P2D7 4330 aa9.55□□□□□ -0.88
PMS1-201ENST00000342075 Q6ZUT4 128 aa9.54□□□□□ -0.88
PMS1-201ENST00000342075 TMEM243Q9BU79 118 aa9.54□□□□□ -0.88
PMS1-201ENST00000342075 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
PMS1-201ENST00000342075 FGF6P10767 208 aa9.54□□□□□ -0.88
PMS1-201ENST00000342075 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 MPV17L2Q567V2 206 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 WFDC10BQ8IUB3 73 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 BAALCQ8WXS3 180 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 HSPB8Q9UJY1 196 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 IGLV4-3A0A075B6K6 122 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 PRSS29PA6NIE9 313 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.53□□□□□ -0.88
PMS1-201ENST00000342075 PRSS1P07477 247 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 ERASQ7Z444 233 aa9.53□□□□□ -0.88
PMS1-201ENST00000342075 UBE2L6O14933 153 aa9.52□□□□□ -0.89
PMS1-201ENST00000342075 CLPSL2Q6UWE3 100 aa9.52□□□□□ -0.89
PMS1-201ENST00000342075 SCGB1D1O95968 90 aa9.52□□□□□ -0.89
PMS1-201ENST00000342075 TCTAP57738 103 aa9.52□□□□□ -0.89
PMS1-201ENST00000342075 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
PMS1-201ENST00000342075 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
PMS1-201ENST00000342075 H3BNG1 76 aa9.51□□□□□ -0.89
PMS1-201ENST00000342075 MAJINQ3KP22 176 aa9.51□□□□□ -0.89
PMS1-201ENST00000342075 Q6ZN92 141 aa9.5□□□□□ -0.89
PMS1-201ENST00000342075 AMMECR1LQ6DCA0 310 aa9.5□□□□□ -0.89
PMS1-201ENST00000342075 KMT2AQ03164 3969 aa9.5□□□□□ -0.89
PMS1-201ENST00000342075 LINC00588Q9Y4M8 146 aa9.49□□□□□ -0.89
PMS1-201ENST00000342075 ATP5LO75964 103 aa9.49□□□□□ -0.89
PMS1-201ENST00000342075 IGHV3-30P01768 117 aa9.49□□□□□ -0.89
PMS1-201ENST00000342075 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
PMS1-201ENST00000342075 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
PMS1-201ENST00000342075 IGHV3-30-5P0DP03 117 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms