RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 FSTL3O95633 263 aa11.41□□□□□ -0.58
COL11A2-201ENST00000341947 MED13Q9UHV7 2174 aa11.41□□□□□ -0.58
COL11A2-201ENST00000341947 NACAE9PAV3 2078 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 DYSFO75923 2080 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 IGLC6P0CF74 106 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 P0C879 139 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 A0A1B0GXF2 115 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 CFAP126Q5VTH2 177 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 LINC00643Q86TS7 51 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 LY6G6DO95868 133 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 TCL1BO95988 128 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 ZNF843Q8N446 348 aa11.4□□□□□ -0.58
COL11A2-201ENST00000341947 C11orf1Q9H5F2 150 aa11.4□□□□□ -0.59
COL11A2-201ENST00000341947 DENND4CQ5VZ89 1909 aa11.4□□□□□ -0.59
COL11A2-201ENST00000341947 UBE2D1P51668 147 aa11.39□□□□□ -0.59
COL11A2-201ENST00000341947 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
COL11A2-201ENST00000341947 KIF26AQ9ULI4 1882 aaPredicted RBP11.39□□□□□ -0.59
COL11A2-201ENST00000341947 TRBV6-4A0A1B0GX49 114 aa11.39□□□□□ -0.59
COL11A2-201ENST00000341947 TRAV23DV6A0A075B6W5 121 aa11.39□□□□□ -0.59
COL11A2-201ENST00000341947 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
COL11A2-201ENST00000341947 CDKN2A-AS1Q9UH64 79 aa11.38□□□□□ -0.59
COL11A2-201ENST00000341947 SPANXB1Q9NS25 103 aaPredicted RBP11.38□□□□□ -0.59
COL11A2-201ENST00000341947 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
COL11A2-201ENST00000341947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL11A2-201ENST00000341947 NOTCH3Q9UM47 2321 aa11.37□□□□□ -0.59
COL11A2-201ENST00000341947 LINC00322Q6ZN03 302 aaPredicted RBP11.37□□□□□ -0.59
COL11A2-201ENST00000341947 TMEM131Q92545 1883 aa11.37□□□□□ -0.59
COL11A2-201ENST00000341947 PTH2Q96A98 100 aa11.37□□□□□ -0.59
COL11A2-201ENST00000341947 IGLV4-3A0A075B6K6 122 aa11.37□□□□□ -0.59
COL11A2-201ENST00000341947 SVIPQ8NHG7 77 aa11.37□□□□□ -0.59
COL11A2-201ENST00000341947 SPATA12Q7Z6I5 190 aa11.36□□□□□ -0.59
COL11A2-201ENST00000341947 ZNF706Q9Y5V0 76 aaPredicted RBP11.36□□□□□ -0.59
COL11A2-201ENST00000341947 IGLV2-8P01709 118 aa11.36□□□□□ -0.59
COL11A2-201ENST00000341947 NBASA2RRP1 2371 aa11.36□□□□□ -0.59
COL11A2-201ENST00000341947 CACNA1HO95180 2353 aa11.36□□□□□ -0.59
COL11A2-201ENST00000341947 EBI3Q14213 229 aa11.36□□□□□ -0.59
COL11A2-201ENST00000341947 XAGE1AQ9HD64 81 aa11.35□□□□□ -0.59
COL11A2-201ENST00000341947 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
COL11A2-201ENST00000341947 ZFAND3Q9H8U3 227 aa11.35□□□□□ -0.59
COL11A2-201ENST00000341947 LY6LH3BQJ8 138 aa11.35□□□□□ -0.59
COL11A2-201ENST00000341947 BBC3Q96PG8 261 aaPredicted RBP11.35□□□□□ -0.59
COL11A2-201ENST00000341947 IGLV2-18A0A075B6J9 118 aa11.34□□□□□ -0.59
COL11A2-201ENST00000341947 C11orf71Q6IPW1 123 aa11.34□□□□□ -0.59
COL11A2-201ENST00000341947 K7ERS5 55 aa11.34□□□□□ -0.59
COL11A2-201ENST00000341947 PSMG3-AS1Q96PY0 264 aa11.34□□□□□ -0.59
COL11A2-201ENST00000341947 SLPIP03973 132 aa11.34□□□□□ -0.59
COL11A2-201ENST00000341947 LINC00308Q8TCZ7 52 aa11.34□□□□□ -0.59
COL11A2-201ENST00000341947 ZNF702PQ9H963 129 aa11.34□□□□□ -0.59
COL11A2-201ENST00000341947 PLXNB3Q9ULL4 1909 aa11.33□□□□□ -0.6
COL11A2-201ENST00000341947 M0QY20 66 aa11.33□□□□□ -0.6
COL11A2-201ENST00000341947 SCXQ7RTU7 201 aa11.33□□□□□ -0.6
COL11A2-201ENST00000341947 WFDC10BQ8IUB3 73 aa11.33□□□□□ -0.6
COL11A2-201ENST00000341947 PCNX1Q96RV3 2341 aa11.33□□□□□ -0.6
COL11A2-201ENST00000341947 CHD3Q12873 2000 aaKnown RBP11.33□□□□□ -0.6
COL11A2-201ENST00000341947 C10orf99Q6UWK7 81 aa11.33□□□□□ -0.6
COL11A2-201ENST00000341947 M0R2N4 97 aa11.33□□□□□ -0.6
COL11A2-201ENST00000341947 C1orf229Q6ZS94 237 aaPredicted RBP11.33□□□□□ -0.6
COL11A2-201ENST00000341947 ADAMTS9Q9P2N4 1935 aa11.32□□□□□ -0.6
COL11A2-201ENST00000341947 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
COL11A2-201ENST00000341947 GDF5OSQ5U4N7 250 aa11.32□□□□□ -0.6
COL11A2-201ENST00000341947 G3V4G9 280 aa11.32□□□□□ -0.6
COL11A2-201ENST00000341947 ATP5EP2Q5VTU8 51 aa11.32□□□□□ -0.6
COL11A2-201ENST00000341947 PIK3CD-AS1Q5SR53 167 aa11.32□□□□□ -0.6
COL11A2-201ENST00000341947 C22orf34Q6ZV56 151 aa11.31□□□□□ -0.6
COL11A2-201ENST00000341947 DCANP1Q8TF63 244 aa11.31□□□□□ -0.6
COL11A2-201ENST00000341947 MLST8Q9BVC4 326 aa11.31□□□□□ -0.6
COL11A2-201ENST00000341947 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
COL11A2-201ENST00000341947 SDIM1Q6ZPB5 146 aa11.31□□□□□ -0.6
COL11A2-201ENST00000341947 PROK1P58294 105 aa11.3□□□□□ -0.6
COL11A2-201ENST00000341947 KPRPQ5T749 579 aaPredicted RBP11.3□□□□□ -0.6
COL11A2-201ENST00000341947 Q8N976 141 aa11.3□□□□□ -0.6
COL11A2-201ENST00000341947 LY6G6CO95867 125 aa11.3□□□□□ -0.6
COL11A2-201ENST00000341947 C3orf22Q8N5N4 141 aa11.3□□□□□ -0.6
COL11A2-201ENST00000341947 IGKV2-28A0A075B6P5 120 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 IGKV2D-28P01615 120 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 BRK1Q8WUW1 75 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 ENHOQ6UWT2 76 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 LINC01006Q8NI28 216 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 CD164L2Q6UWJ8 174 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 DHRS4-AS1Q9P1J3 65 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 RBX1P62877 108 aa11.29□□□□□ -0.6
COL11A2-201ENST00000341947 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 C9orf85Q96MD7 179 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 PPDPFQ9H3Y8 114 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
COL11A2-201ENST00000341947 IGLV4-69A0A075B6H9 119 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 LOC107984640A0A0U1RRK4 108 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 TEX49A0A1B0GTD5 131 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 CCKP06307 115 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 LELP1Q5T871 98 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 SPTSSBQ8NFR3 76 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 RNASE8Q8TDE3 154 aaKnown RBP11.28□□□□□ -0.6
COL11A2-201ENST00000341947 M0R378 163 aa11.28□□□□□ -0.6
COL11A2-201ENST00000341947 OBSL1O75147 1896 aa11.27□□□□□ -0.6
COL11A2-201ENST00000341947 SPINK6Q6UWN8 80 aa11.27□□□□□ -0.6
COL11A2-201ENST00000341947 UBE2D3P61077 147 aa11.27□□□□□ -0.61
COL11A2-201ENST00000341947 PCNX2A6NKB5 2137 aa11.27□□□□□ -0.61
COL11A2-201ENST00000341947 C20orf197Q8N268 126 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms