RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 GTSF1LQ9H1H1 148 aa10.12□□□□□ -0.79
NIPAL3-202ENST00000339255 A0A096LPF7 62 aa10.12□□□□□ -0.79
NIPAL3-202ENST00000339255 NUPR2A6NF83 97 aa10.12□□□□□ -0.79
NIPAL3-202ENST00000339255 LINC01549A6NIU2 74 aa10.12□□□□□ -0.79
NIPAL3-202ENST00000339255 IGHV3-38A0A0C4DH36 116 aa10.11□□□□□ -0.79
NIPAL3-202ENST00000339255 C5orf52A6NGY3 159 aa10.11□□□□□ -0.79
NIPAL3-202ENST00000339255 TRBV25-1A0A075B6N4 114 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 NUDT3O95989 172 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 HBDP02042 147 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 AMTP48728 403 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 TIRAPP58753 221 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 SNRPEP62304 92 aaKnown RBP10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 TRBV6-8A0A0A6YYG3 113 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 IGHV1-24A0A0C4DH33 117 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 NUPR1O60356 82 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 TMEM18Q96B42 140 aa10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 PACRGQ96M98 296 aaPredicted RBP10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 KLK5Q9Y337 293 aaPredicted RBP10.09□□□□□ -0.79
NIPAL3-202ENST00000339255 S100A2P29034 98 aa10.08□□□□□ -0.8
NIPAL3-202ENST00000339255 HIST3H2BBQ8N257 126 aa10.08□□□□□ -0.8
NIPAL3-202ENST00000339255 CYSLTR1Q9Y271 337 aa10.08□□□□□ -0.8
NIPAL3-202ENST00000339255 IGLL5B9A064 214 aa10.07□□□□□ -0.8
NIPAL3-202ENST00000339255 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
NIPAL3-202ENST00000339255 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
NIPAL3-202ENST00000339255 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
NIPAL3-202ENST00000339255 TMEM243Q9BU79 118 aa10.07□□□□□ -0.8
NIPAL3-202ENST00000339255 H7C423 109 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 TCTAP57738 103 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 FAM19A2Q8N3H0 131 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 A0A096LNJ9 63 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 PMCHL1Q16048 86 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 PDZD11Q5EBL8 140 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 WWC2-AS2Q96NR7 200 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
NIPAL3-202ENST00000339255 LELP1Q5T871 98 aa10.05□□□□□ -0.8
NIPAL3-202ENST00000339255 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
NIPAL3-202ENST00000339255 UBE2L6O14933 153 aa10.04□□□□□ -0.8
NIPAL3-202ENST00000339255 LEPROTL1O95214 131 aa10.04□□□□□ -0.8
NIPAL3-202ENST00000339255 PKIAP61925 76 aa10.04□□□□□ -0.8
NIPAL3-202ENST00000339255 LYPD5Q6UWN5 251 aa10.04□□□□□ -0.8
NIPAL3-202ENST00000339255 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
NIPAL3-202ENST00000339255 NPSP0C0P6 89 aa10.03□□□□□ -0.8
NIPAL3-202ENST00000339255 MUC7Q8TAX7 377 aa10.03□□□□□ -0.8
NIPAL3-202ENST00000339255 HIST1H2BLQ99880 126 aa10.03□□□□□ -0.8
NIPAL3-202ENST00000339255 TIMM21Q9BVV7 248 aa10.03□□□□□ -0.8
NIPAL3-202ENST00000339255 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
NIPAL3-202ENST00000339255 ATP5LO75964 103 aa10.02□□□□□ -0.8
NIPAL3-202ENST00000339255 RPL39P62891 51 aaKnown RBP10.02□□□□□ -0.8
NIPAL3-202ENST00000339255 ERASQ7Z444 233 aa10.02□□□□□ -0.8
NIPAL3-202ENST00000339255 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.8
NIPAL3-202ENST00000339255 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.8
NIPAL3-202ENST00000339255 PYGO1Q9Y3Y4 419 aa10.02□□□□□ -0.8
NIPAL3-202ENST00000339255 TRAV8-6A0A0B4J262 113 aa10.02□□□□□ -0.81
NIPAL3-202ENST00000339255 FABP4P15090 132 aa10.02□□□□□ -0.81
NIPAL3-202ENST00000339255 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
NIPAL3-202ENST00000339255 CCL18P55774 89 aa10.02□□□□□ -0.81
NIPAL3-202ENST00000339255 SCGB3A1Q96QR1 104 aa10.02□□□□□ -0.81
NIPAL3-202ENST00000339255 TIMM17AQ99595 171 aa10.02□□□□□ -0.81
NIPAL3-202ENST00000339255 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
NIPAL3-202ENST00000339255 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
NIPAL3-202ENST00000339255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.01□□□□□ -0.81
NIPAL3-202ENST00000339255 PAPPA-AS1Q5QFB9 102 aa10.01□□□□□ -0.81
NIPAL3-202ENST00000339255 CSDC2Q9Y534 153 aaKnown RBP10.01□□□□□ -0.81
NIPAL3-202ENST00000339255 IFITM10A6NMD0 228 aa10□□□□□ -0.81
NIPAL3-202ENST00000339255 ESRGQ1W209 222 aa10□□□□□ -0.81
NIPAL3-202ENST00000339255 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
NIPAL3-202ENST00000339255 TMEM141Q96I45 108 aa10□□□□□ -0.81
NIPAL3-202ENST00000339255 IGIPA6NJ69 53 aa9.99□□□□□ -0.81
NIPAL3-202ENST00000339255 FGF6P10767 208 aa9.99□□□□□ -0.81
NIPAL3-202ENST00000339255 IFI27L1Q96BM0 104 aa9.99□□□□□ -0.81
NIPAL3-202ENST00000339255 APLNQ9ULZ1 77 aa9.99□□□□□ -0.81
NIPAL3-202ENST00000339255 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
NIPAL3-202ENST00000339255 DGAT2L7PQ6IED9 249 aa9.99□□□□□ -0.81
NIPAL3-202ENST00000339255 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
NIPAL3-202ENST00000339255 A0A1B0GUV1 79 aa9.98□□□□□ -0.81
NIPAL3-202ENST00000339255 MRPS36P82909 103 aaKnown RBP9.98□□□□□ -0.81
NIPAL3-202ENST00000339255 OR5A1Q8NGJ0 315 aa9.98□□□□□ -0.81
NIPAL3-202ENST00000339255 MRPS16Q9Y3D3 137 aaKnown RBP9.98□□□□□ -0.81
NIPAL3-202ENST00000339255 A0A087WX48 190 aa9.97□□□□□ -0.81
NIPAL3-202ENST00000339255 GAGE6Q13070 117 aa9.97□□□□□ -0.81
NIPAL3-202ENST00000339255 Q6ZN92 141 aa9.97□□□□□ -0.81
NIPAL3-202ENST00000339255 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
NIPAL3-202ENST00000339255 TMEM262E9PQX1 116 aa9.96□□□□□ -0.81
NIPAL3-202ENST00000339255 TENM2Q9NT68 2774 aa9.96□□□□□ -0.81
NIPAL3-202ENST00000339255 ZFAND6Q6FIF0 208 aa9.96□□□□□ -0.82
NIPAL3-202ENST00000339255 UPK3BQ9BT76 320 aa9.96□□□□□ -0.82
NIPAL3-202ENST00000339255 IGLV4-3A0A075B6K6 122 aa9.95□□□□□ -0.82
NIPAL3-202ENST00000339255 C3orf84H3BNL1 204 aa9.95□□□□□ -0.82
NIPAL3-202ENST00000339255 RBX1P62877 108 aa9.95□□□□□ -0.82
NIPAL3-202ENST00000339255 LINC00173Q6ZV60 143 aa9.95□□□□□ -0.82
NIPAL3-202ENST00000339255 SPATA12Q7Z6I5 190 aa9.95□□□□□ -0.82
NIPAL3-202ENST00000339255 LINC00588Q9Y4M8 146 aa9.95□□□□□ -0.82
NIPAL3-202ENST00000339255 PRSS1P07477 247 aa9.94□□□□□ -0.82
NIPAL3-202ENST00000339255 MPV17L2Q567V2 206 aa9.94□□□□□ -0.82
NIPAL3-202ENST00000339255 ZNF664Q8N3J9 261 aa9.94□□□□□ -0.82
NIPAL3-202ENST00000339255 OR10D4PQ8NGN7 298 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms