RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 B3GALT5-AS1P59052 145 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 LINC00694P0DN24 101 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 TRBV27A0A0K0K1C4 114 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 Q6Q795 121 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 Q8N9L7 120 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 A0A0J9YY99 117 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 WFDC10BQ8IUB3 73 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 TPSG1Q9NRR2 321 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 HRCT1Q6UXD1 115 aa4.78□□□□□ -1.65
CSMD1-201ENST00000335551 SNURFQ9Y675 71 aa4.78□□□□□ -1.65
CSMD1-201ENST00000335551 ZNRD1Q9P1U0 126 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 E7EQL1 145 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 MIFP14174 115 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 CCL18P55774 89 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 FHL1Q13642 323 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 SPART-AS1P0CW21 52 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 KAAG1Q9UBP8 84 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 C2orf70A6NJV1 201 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 TRIAP1O43715 76 aa4.77□□□□□ -1.65
CSMD1-201ENST00000335551 SP5Q6BEB4 398 aaPredicted RBP4.77□□□□□ -1.65
CSMD1-201ENST00000335551 LOXP28300 417 aaPredicted RBP4.77□□□□□ -1.65
CSMD1-201ENST00000335551 H7C423 109 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 FAM222AQ5U5X8 452 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 RNF138Q8WVD3 245 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 CSDC2Q9Y534 153 aaKnown RBP4.76□□□□□ -1.65
CSMD1-201ENST00000335551 NPBQ8NG41 125 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 IGHV4-59P01825 116 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 HHLA3Q9XRX5 114 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 A0A1B0GXF2 115 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 ARTNQ5T4W7 220 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 VPREB3Q9UKI3 123 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 Q6JHZ5 121 aa4.76□□□□□ -1.65
CSMD1-201ENST00000335551 Q6ZR03 302 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 FAM167A-AS1Q96KT0 104 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 TRBV10-1A0A0K0K1A3 114 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 TRAV7A0A075B6U4 112 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 SERTAD4-AS1Q5TG53 156 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 K7ENP7 123 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 C20orf203Q8NBC4 194 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 TTTY13Q9BZ97 58 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 IBA57-AS1B1ANH7 110 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 UBE2D2P62837 147 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 MSRB1Q9NZV6 116 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 YPEL4Q96NS1 127 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 GPHB5Q86YW7 130 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 CCKP06307 115 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 DEFB112Q30KQ8 113 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 CFAP126Q5VTH2 177 aa4.75□□□□□ -1.65
CSMD1-201ENST00000335551 K7EIM0 57 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 Q0VFX4 171 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 IGLV3-9A0A075B6K5 115 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 IGHV3-30P01768 117 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 IGHV3-33P01772 117 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 IGHV3-30-5P0DP03 117 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 C19orf71A6NCJ1 209 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 I3L2K1 104 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 IGKV1-17P01599 117 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 TMEM263Q8WUH6 116 aaKnown RBP4.74□□□□□ -1.65
CSMD1-201ENST00000335551 NEXN-AS1Q8NBZ9 246 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 LINC00526Q96FQ7 95 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 CEP295Q9C0D2 2601 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 C9orf85Q96MD7 179 aa4.74□□□□□ -1.65
CSMD1-201ENST00000335551 THSD7BQ9C0I4 1608 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 VWCEQ96DN2 955 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 MRPS12O15235 138 aaKnown RBP4.73□□□□□ -1.65
CSMD1-201ENST00000335551 IGLV3-1P01715 115 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 DHRS4-AS1Q9P1J3 65 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 ZFAND2AQ8N6M9 145 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 EPG5Q9HCE0 2579 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 IGLV11-55A0A075B6I3 123 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 TMEM223A0PJW6 202 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 LY6HO94772 140 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 NRACQ8N912 160 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 CCL24O00175 119 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 LINC00308Q8TCZ7 52 aa4.73□□□□□ -1.65
CSMD1-201ENST00000335551 SCXQ7RTU7 201 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 LST1O00453 97 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 XGP55808 180 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 FAM19A5Q7Z5A7 132 aaPredicted RBP4.72□□□□□ -1.65
CSMD1-201ENST00000335551 WT1P19544 449 aaPredicted RBP4.72□□□□□ -1.65
CSMD1-201ENST00000335551 C9orf66Q5T8R8 295 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 WFDC10AQ9H1F0 79 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 CTSGP08311 255 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 IGLV1-44P01699 117 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 RNF223E7ERA6 249 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 ODF3Q96PU9 254 aa4.72□□□□□ -1.65
CSMD1-201ENST00000335551 F8W735 103 aaPredicted RBP4.71□□□□□ -1.65
CSMD1-201ENST00000335551 C3orf84H3BNL1 204 aa4.71□□□□□ -1.66
CSMD1-201ENST00000335551 K7EMT4 169 aa4.71□□□□□ -1.66
CSMD1-201ENST00000335551 U3KQK5 164 aa4.71□□□□□ -1.66
CSMD1-201ENST00000335551 C1orf158Q8N1D5 194 aa4.71□□□□□ -1.66
CSMD1-201ENST00000335551 UBE2D4Q9Y2X8 147 aa4.71□□□□□ -1.66
CSMD1-201ENST00000335551 Q96MF0 132 aa4.71□□□□□ -1.66
CSMD1-201ENST00000335551 TRBV6-5A0A0K0K1A5 114 aa4.7□□□□□ -1.66
CSMD1-201ENST00000335551 C17orf82Q86X59 251 aaPredicted RBP4.7□□□□□ -1.66
CSMD1-201ENST00000335551 IGHV7-81A0A0B4J1V7 117 aa4.7□□□□□ -1.66
CSMD1-201ENST00000335551 ZNF706Q9Y5V0 76 aaPredicted RBP4.7□□□□□ -1.66
CSMD1-201ENST00000335551 KLK12Q9UKR0 248 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms